Factsheet for Bra012513.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98661	Canola	cytosol	99.16	84.56
Bra020921.1-P	Field mustard	cytosol	51.79	60.74
Bra027609.1-P	Field mustard	cytosol	31.16	51.39
AT4G20210.1	Thale cress	plastid	61.89	49.0
Bra012515.1-P	Field mustard	extracellular	24.0	46.15
Bra002714.1-P	Field mustard	plastid	56.63	45.67
Bra020953.1-P	Field mustard	plastid	57.89	45.08
Bra027931.1-P	Field mustard	plastid	55.79	44.09
Bra028251.1-P	Field mustard	cytosol	50.32	42.91
Bra002165.1-P	Field mustard	cytosol	48.63	41.55
Bra039519.1-P	Field mustard	cytosol	47.79	40.75
Bra002968.1-P	Field mustard	plastid	30.95	38.08
Bra021566.1-P	Field mustard	plastid	40.63	37.99
PGSC0003DMT400070310	Potato	cytosol	24.0	36.66
PGSC0003DMT400075074	Potato	cytosol	15.16	34.62
Bra021563.1-P	Field mustard	cytoskeleton, cytosol, plastid	40.42	34.35
PGSC0003DMT400079785	Potato	cytosol	22.32	34.08
PGSC0003DMT400050941	Potato	cytosol	17.68	33.6
Bra021560.1-P	Field mustard	plastid	40.84	32.23
Solyc01g101220.1.1	Tomato	cytosol	11.37	32.14
Bra001557.1-P	Field mustard	plastid	40.42	31.79
Bra012955.1-P	Field mustard	plastid	39.58	31.39
Bra001555.1-P	Field mustard	plastid	39.58	30.92
Bra021564.1-P	Field mustard	plastid	38.95	30.68
Bra035927.1-P	Field mustard	mitochondrion, plastid	36.0	30.11
Solyc01g101190.2.1	Tomato	cytosol	34.53	29.71
PGSC0003DMT400047124	Potato	cytosol	19.37	29.58
VIT_18s0001g04200.t01	Wine grape	cytosol	6.74	26.89
GSMUA_Achr6P24330_001	Banana	cytosol	6.53	21.99
Bra000727.1-P	Field mustard	plastid	22.74	21.22
Bra025163.1-P	Field mustard	cytosol	24.63	20.89
Bra000568.1-P	Field mustard	plastid	25.47	20.34
Bra021082.1-P	Field mustard	cytosol	23.37	20.33
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	13.26	20.32
GSMUA_Achr6P24340_001	Banana	cytosol	6.32	20.13
Os02t0458100-01	Rice	plastid	16.21	19.69
Bra038504.1-P	Field mustard	plastid	21.89	19.37
VIT_18s0001g04510.t01	Wine grape	plastid	12.42	19.28
KRG93110	Soybean	mitochondrion	10.11	16.22
Bra027079.1-P	Field mustard	plastid	11.37	16.22
VIT_18s0001g05430.t01	Wine grape	cytosol	15.79	15.56
Bra025164.1-P	Field mustard	cytosol	26.53	11.86

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	EnsemblPlantsGene:Bra012513	EnsemblPlants:Bra012513.1	EnsemblPlants:Bra012513.1-P
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010333	GO:GO:0016829	GO:GO:0046872	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf
UniProt:M4D7Q3	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF22	SUPFAM:SSF48239
SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI0002540C0D	SEG:seg	:	:	:	:

Description

AT4G20200 (E=2e-141) | terpene synthase/cyclase family protein

Coordinates

chrA03:-:23889598..23895186

Molecular Weight (calculated)

55313.8 Da

IEP (calculated)

5.776

GRAVY (calculated)

-0.205

Length

475 amino acids

Sequence
(BLAST)

001: MLMSSSPAEL GHGSAKRKVL LIYLMTSLGV AYHFENEIEK TLAHAFEKID DMIANEHDLY TISIFFWVFR TYGYNMSAAA HLRTTRDYIM DEALSFTMEH
101: MESLAGRARP HLSRLIQNAL GLSQHWNMEI LVAMEFISFY EQEEDHDETL FKFSKLNFKL LQLIYVKELK MVTKWYKELD FASKLPPYYR DRIVELHFFV
201: ISMYFEPQFS SARIMLTKFY TVETITDDTF DRYASISEAE SLANSLERWA PDKDMDTQPD YLKFVFKFIL DAFKDFEREV GSEGISYSVK GTIEEFKRLV
301: KSNLDLAKWV QIAHVPSFED YMEVGEVEIT MYATMAGTLM GMGYIATKET YEWLKSRPKL IQSLSINGRL MNDMAGFEDD MSRGYVTTGV NCYMKQFGVT
401: KSEAFKKLHQ MRVDNDKIVN EELLKIKDVP KRVLKEAINC ARMTHVAYGY GEGLTHPEGK IKEYIIALYI DLIRL

Best Arabidopsis Sequence Match ( AT4G20200.1 )
(BLAST)

001: MEATSVFWPK LGSQIFLSSS TNLWPLSKLY GFHLTSFPSK PLKHIRLKAT NTLTFDDQER IRKFKKLPTS EWTHYGHSIS IDVSEMDALR KEIDALKPIL
101: KSTLMSFKGI DSTKKRILMI YLLVSLGLAY HFEEEIYETL KMSFENIDKM MDGEDDLYTV SIIFWVFRRH GYHISYGVFQ RFKGSNGNFK ESLTRDAKGM
201: LSLYEAANLG TTKDFILEEA LSFTSSHLES LAASGTCPPH LSVRIRNALG LSQHWNMEML VPVEFIPFYE QEIEHDEMLL KFAKLSFKLG QLQYLQELKT
301: LTKWYKELDF ATNLPPYFRD RIVEHHFLVQ AVFFSPQLSR ERIMMIQYFT GLALLDDTFD RYASLHEAES LANSLERWAP DQAMDKQPDY LRFVLNFILD
401: TFEEFKRELG PEERSYSVNA TIEEFKAAAK ANIDLEKWAQ ADHIPSFEEY MEVGEVEVTV YASLAGIFMS MGKMATKEAF EWLKSRPKLV QYLSIKGRLM
501: NDLMGYEDDM SRGYVTNAVN CYMKQYGVTK EEAFRELYKI VVAANKTLNE EFLSTTGVPH FLLKATIDLA RMMTVAYNVN EGFTNPQGKI KEYMTSMFVD
601: QIHI

Arabidopsis Description

TPS07Putative terpenoid synthase 7 [Source:UniProtKB/Swiss-Prot;Acc:O65434]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.