Factsheet for Bra002714.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 3
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49723	Canola	plastid	98.47	97.32
AT3G29110.1	Thale cress	plastid	66.72	66.05
Bra027609.1-P	Field mustard	cytosol	30.05	61.46
Bra012513.1-P	Field mustard	cytosol	45.67	56.63
Bra012515.1-P	Field mustard	extracellular	23.09	55.06
Bra020953.1-P	Field mustard	plastid	53.14	51.31
Bra020921.1-P	Field mustard	cytosol	34.97	50.86
Bra002968.1-P	Field mustard	plastid	33.11	50.52
Bra027931.1-P	Field mustard	plastid	51.1	50.08
Bra002165.1-P	Field mustard	cytosol	42.27	44.78
Bra028251.1-P	Field mustard	cytosol	42.11	44.52
Bra039519.1-P	Field mustard	cytosol	39.39	41.65
PGSC0003DMT400050941	Potato	cytosol	17.15	40.4
Bra021566.1-P	Field mustard	plastid	33.62	38.98
VIT_18s0001g04200.t01	Wine grape	cytosol	7.81	38.66
Bra021563.1-P	Field mustard	cytoskeleton, cytosol, plastid	35.82	37.75
Bra001557.1-P	Field mustard	plastid	37.86	36.92
Bra001555.1-P	Field mustard	plastid	37.52	36.35
Bra021560.1-P	Field mustard	plastid	36.67	35.88
Bra021564.1-P	Field mustard	plastid	35.99	35.16
Bra012955.1-P	Field mustard	plastid	34.3	33.72
Bra035927.1-P	Field mustard	mitochondrion, plastid	32.43	33.63
PGSC0003DMT400075074	Potato	cytosol	11.71	33.17
PGSC0003DMT400070310	Potato	cytosol	17.15	32.48
Solyc01g101190.2.1	Tomato	cytosol	29.03	30.98
PGSC0003DMT400079785	Potato	cytosol	15.96	30.23
PGSC0003DMT400047124	Potato	cytosol	15.11	28.62
VIT_18s0001g04510.t01	Wine grape	plastid	14.6	28.1
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	14.77	28.06
Os02t0458100-01	Rice	plastid	18.0	27.11
Solyc01g101220.1.1	Tomato	cytosol	7.64	26.79
Bra000727.1-P	Field mustard	plastid	21.39	24.75
Bra025163.1-P	Field mustard	cytosol	23.09	24.29
Bra000568.1-P	Field mustard	plastid	24.11	23.87
Bra021082.1-P	Field mustard	cytosol	21.9	23.63
Bra038504.1-P	Field mustard	plastid	21.39	23.46
GSMUA_Achr6P24340_001	Banana	cytosol	5.77	22.82
GSMUA_Achr6P24330_001	Banana	cytosol	5.26	21.99
VIT_18s0001g05430.t01	Wine grape	cytosol	17.15	20.95
KRG93110	Soybean	mitochondrion	10.53	20.95
Bra027079.1-P	Field mustard	plastid	10.7	18.92
Bra025164.1-P	Field mustard	cytosol	24.79	13.75

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	EnsemblPlantsGene:Bra002714	EnsemblPlants:Bra002714.1	EnsemblPlants:Bra002714.1-P
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010333	GO:GO:0016829	GO:GO:0046872	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf
UniProt:M4CET2	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF25	SUPFAM:SSF48239
SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI0002544F9A	:	:	:	:	:

Description

AT3G29110 (E=2e-224) | terpene synthase/cyclase family protein

Coordinates

chrA10:-:8038181..8041942

Molecular Weight (calculated)

68474.1 Da

IEP (calculated)

6.919

GRAVY (calculated)

-0.261

Length

589 amino acids

Sequence
(BLAST)

001: MAVLGARHGS QFSLPSRTKM FREMKISRFP LTSFPRKKAK HVSLKATPTC DGRTFKKMSP SEWTNHFDYV SIDVSEMDAL KREIEALKPN VGKMFMSPKG
101: DDSVKKRILS IYLLVSLGLA YHFEDEIEES VRDAFEKIDE MMAGEEDLYT VSTIFWVFRT YGYNISSEVF TRFKEDNGKF KQCLTKDVRG MLSLYEAAHL
201: GTTTEYIMDE ALSFSSKTLA LIAEDHMFPS HLLRHIQNAL ALPQRWNMEV MVAVEYIRFY EHEVGHDEMI LKFAKLNFNL IQLHYLRELK ILIKWFKDYD
301: FASNLPRYYR EVIVEMHFFS LAMFFEPQFS RARIMQTKFY MAEMIIDDTC DRYATLPEIE SLVGSDDAMD SHPGFLKFVF KFMLDVFEDC ERELRLQKRS
401: YSVEETRDEY KLFVKSNLDL AKLAPAGHVP SFEKYMEVGK VEVGGFIILA SALMGIDDMD EVQGYGWLKS RSKLLQYLAE MLRLMNDKTG FEIDMNRGYV
501: TTGMNCYMRQ YGVAEREASR EFQNIIEKTR KLMNEELLKT SDVPRRVLKT ALDCARTGCI AYKAGEGVTN PRGKITKHII SLYVDKICL

Best Arabidopsis Sequence Match ( AT3G29110.1 )
(BLAST)

001: METITVFGPK HGSPLSLPSR TNMCWEMKPS RFPLTSVRGK PAKQVGLKVS ASCDRPISKL PPSKWTNYFH SVLVDVSEMD VLEREIEALK PNVREMLMSS
101: KGYDSVKKRS LMIYLLVSLG LAYHFEEEIE KSLKDGFEKI DEIIAGEDDL YTISTIFWVF RTYGYNMSSD VFRRFKEENG KFKESLIEDA RGMLSLYEAA
201: HLGTTTDYIL DEALDFASNN LVSLAEDGMC PSHLSTHIRN ALSISQHWNM EIIVAVQYIR FYEQEVGHDE MLLKFAKLNF NLVQRLYLQE VKILTKWYKD
301: QDIHSKLPPY YRPVVTEMHF FSTATFFEPQ FSHARILQTK LFMAELLVDD TCDRYATFSE VESLINSLQR WAPDDAMDTH PDYLKVVFKF ILNAFEECEK
401: ELRPQGRSYS LEQTKEEYKR FAKSNLDLAK LAQAGNVPSF EEYMEVGKDE IGAFVIVAGS LMGMDNIDAV EAYDFLKSRS KFSQSSAEIV RYLNDLAGFE
501: DDMRRGCVST GLNCYMNQYG VTETEVFREF RKMVMNTCKI MNEEFLKTTD VPLRVLKTNF SCVRSGFVGY NEGEGVTYPE GKITKYLTSL YVDQI

Arabidopsis Description

TPS16Putative terpenoid synthase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVP7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.