Factsheet for Bra021566.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 1
plastid 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32356	Canola	plastid	95.47	78.23
Bra021563.1-P	Field mustard	cytoskeleton, cytosol, plastid	79.53	72.27
Bra021564.1-P	Field mustard	plastid	79.72	67.16
Bra021560.1-P	Field mustard	plastid	76.38	64.45
AT3G29410.1	Thale cress	plastid	72.24	60.86
Bra012955.1-P	Field mustard	plastid	58.46	49.58
Bra001555.1-P	Field mustard	plastid	58.86	49.18
Bra035927.1-P	Field mustard	mitochondrion, plastid	53.94	48.24
Bra001557.1-P	Field mustard	plastid	55.91	47.02
VIT_18s0001g04200.t01	Wine grape	cytosol	10.43	44.54
PGSC0003DMT400050941	Potato	cytosol	20.08	40.8
Bra012513.1-P	Field mustard	cytosol	37.99	40.63
Bra027609.1-P	Field mustard	cytosol	22.64	39.93
PGSC0003DMT400075074	Potato	cytosol	16.14	39.42
Bra020921.1-P	Field mustard	cytosol	31.3	39.26
Bra012515.1-P	Field mustard	extracellular	18.31	37.65
Bra002165.1-P	Field mustard	cytosol	37.99	34.71
Bra028251.1-P	Field mustard	cytosol	37.6	34.29
PGSC0003DMT400070310	Potato	cytosol	20.87	34.08
Bra002714.1-P	Field mustard	plastid	38.98	33.62
Solyc01g101220.1.1	Tomato	cytosol	11.02	33.33
PGSC0003DMT400079785	Potato	cytosol	19.88	32.48
Bra027931.1-P	Field mustard	plastid	38.19	32.28
Bra039519.1-P	Field mustard	cytosol	34.45	31.42
Bra020953.1-P	Field mustard	plastid	36.02	30.0
Solyc01g101190.2.1	Tomato	cytosol	32.48	29.89
PGSC0003DMT400047124	Potato	cytosol	16.93	27.65
Bra002968.1-P	Field mustard	plastid	20.87	27.46
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	16.14	26.45
VIT_18s0001g04510.t01	Wine grape	plastid	15.35	25.49
Bra021082.1-P	Field mustard	cytosol	26.18	24.36
Bra025163.1-P	Field mustard	cytosol	26.77	24.29
GSMUA_Achr6P24330_001	Banana	cytosol	6.69	24.11
Bra000727.1-P	Field mustard	plastid	24.02	23.97
Os02t0458100-01	Rice	plastid	18.31	23.79
GSMUA_Achr6P24340_001	Banana	cytosol	6.89	23.49
Bra038504.1-P	Field mustard	plastid	24.02	22.72
Bra000568.1-P	Field mustard	plastid	26.38	22.52
KRG93110	Soybean	mitochondrion	11.61	19.93
VIT_18s0001g05430.t01	Wine grape	cytosol	17.72	18.67
Bra027079.1-P	Field mustard	plastid	11.81	18.02
Bra025164.1-P	Field mustard	cytosol	25.98	12.43

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	EnsemblPlantsGene:Bra021566	EnsemblPlants:Bra021566.1	EnsemblPlants:Bra021566.1-P
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010333	GO:GO:0016829	GO:GO:0046872	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf
UniProt:M4DYH0	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	SUPFAM:SSF48239	SUPFAM:SSF48576
InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI000254419A
SEG:seg	:	:	:	:	:

Description

AT3G29410 (E=1e-212) | terpene synthase/cyclase family protein

Coordinates

chrA01:+:24436781..24439838

Molecular Weight (calculated)

59018.3 Da

IEP (calculated)

6.209

GRAVY (calculated)

-0.220

Length

508 amino acids

Sequence
(BLAST)

001: MCPHSSDKEK IPIVHLLISL AIAHYFESEI EEILHHAFQN LDDLISEEDD LETIAIMFEV FRLYGHKMSC DVFERFKTEE GKFKQSLAHD VRGMLQLYES
101: AHLGLPSEDI MDEALTFTRH HLGMLTGQET NPNLFKQIDH ALYRARYHSI EIVVARQYIS FYGQEEVHDK MLLKFAKLNF NFCQMHYTKE LKIMTKWWKE
201: IGMAPKLSYI RDRIVEVFLF AVGMFFEPRY SLARIHATKF SMLVTALDDT CDAYATLREV ISLHDAFQRW DLGAMEELPS YMRILYQNML ETVEDIDREM
301: KARGKFGSLQ PTIDETKSLM ILYLATSKWA RAGHVPSFED YMEVGSSASG LHDFAAYGYI SVDDCDKKQL HEWFNSRPKI FEALNTVFRL RNDIVTFEQE
401: MSRGEVANGV NCYMKQHGVT KEAAVDVLRK MERENYKIMM EEFVSSKAVP RQILVRAVNT ARVIDLFYKE GDGFGHPDQK IKDILASLFL HPIPLSKLMK
501: VRVNLGDI

Best Arabidopsis Sequence Match ( AT3G29410.2 )
(BLAST)

001: MLMSPHSSDK ERIRLIHLLI SLGIAYYYEN EIEEILHKAY GKLACLISDE DDLETIAIMF EVFRLYGHKM PCDVFERFKS EDGKFKESLV GDVRGLLQLY
101: EAAHLGAPSE DIMDEALSFA RYHLEPLAGT ETSSNLFKHV ENVLYRARYH SIEILVARQY ISFYDQEEDQ DETLLRFSKL NFNFCQMHYV KELKIVTRWW
201: KELGIASKLP YSIRERNVET YLGGLGVLFE PRYSLARIFL AKLTLIMTVV DDTCDAYATL PEVQSLHDAF HRWDLRAMEE LPRYMRIIYQ SVFETVEDID
301: REMIARGKHG RLQLTIDEIK SLMIWYLGIA KWARSDQVPS FEDYMEIGTP SSALDDFASY GFIAMDDCDQ KQLKEWFYSK PKIFHALNAL FRIRNDIVTF
401: EQEMSRGEVA NGVNCYMKQH GVTKEAAVEE LRKMERESYK IMIEEFMTSK AMPRQILVRP VNIARVMDLF YKEADGFGHP DQKLLQLIAS LFLHPIPL

Arabidopsis Description

TPS25Terpenoid synthase 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIA1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.