Factsheet for Bra012515.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
plastid 3
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027609.1-P	Field mustard	cytosol	55.47	47.57
VIT_18s0001g04200.t01	Wine grape	cytosol	18.62	38.66
CDX98659	Canola	plastid	87.85	35.11
Bra002968.1-P	Field mustard	plastid	52.63	33.68
PGSC0003DMT400050941	Potato	cytosol	29.55	29.2
AT4G20200.1	Thale cress	plastid	69.23	28.31
AT1G66020.1	Thale cress	plastid	67.61	27.93
Bra020953.1-P	Field mustard	plastid	62.35	25.25
Bra012513.1-P	Field mustard	cytosol	46.15	24.0
PGSC0003DMT400075074	Potato	cytosol	19.84	23.56
Bra027931.1-P	Field mustard	plastid	56.28	23.13
Bra002714.1-P	Field mustard	plastid	55.06	23.09
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	28.74	22.9
VIT_18s0001g04510.t01	Wine grape	plastid	27.53	22.22
Bra020921.1-P	Field mustard	cytosol	36.44	22.22
Bra002165.1-P	Field mustard	cytosol	49.39	21.94
Bra028251.1-P	Field mustard	cytosol	47.37	21.01
Bra039519.1-P	Field mustard	cytosol	46.56	20.65
Solyc01g101220.1.1	Tomato	cytosol	12.96	19.05
Os02t0458100-01	Rice	plastid	29.15	18.41
Bra021566.1-P	Field mustard	plastid	37.65	18.31
Bra035927.1-P	Field mustard	mitochondrion, plastid	40.49	17.61
Bra001557.1-P	Field mustard	plastid	42.11	17.22
PGSC0003DMT400047124	Potato	cytosol	21.46	17.04
Bra021563.1-P	Field mustard	cytoskeleton, cytosol, plastid	37.25	16.46
Bra001555.1-P	Field mustard	plastid	40.49	16.45
Bra012955.1-P	Field mustard	plastid	38.87	16.03
VIT_18s0001g05430.t01	Wine grape	cytosol	31.17	15.98
Bra021560.1-P	Field mustard	plastid	38.87	15.95
Bra021564.1-P	Field mustard	plastid	37.25	15.26
Solyc01g101190.2.1	Tomato	cytosol	31.98	14.31
Bra000727.1-P	Field mustard	plastid	26.32	12.77
KRG93110	Soybean	mitochondrion	14.98	12.5
Bra038504.1-P	Field mustard	plastid	25.1	11.55
Bra000568.1-P	Field mustard	plastid	26.32	10.92
Bra025163.1-P	Field mustard	cytosol	24.7	10.89
Bra021082.1-P	Field mustard	cytosol	23.89	10.81
Bra027079.1-P	Field mustard	plastid	13.77	10.21
Bra025164.1-P	Field mustard	cytosol	24.29	5.65
PGSC0003DMT400079785	Potato	cytosol	4.05	3.22
PGSC0003DMT400070310	Potato	cytosol	3.64	2.89
GSMUA_Achr6P24340_001	Banana	cytosol	0.0	0.0
GSMUA_Achr6P24330_001	Banana	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:50.4.2	EnsemblPlantsGene:Bra012515	EnsemblPlants:Bra012515.1	EnsemblPlants:Bra012515.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829
InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	UniProt:M4D7Q5	PFAM:PF01397	PANTHER:PTHR31045
PANTHER:PTHR31045:SF4	SUPFAM:SSF48239	SignalP:SignalP-noTM	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI0002540C0B	:	:	:	:	:

Description

AT1G66020 (E=1e-085) | terpene synthase/cyclase family protein

Coordinates

chrA03:-:23871125..23873313

Molecular Weight (calculated)

28678.3 Da

IEP (calculated)

5.059

GRAVY (calculated)

-0.270

Length

247 amino acids

Sequence
(BLAST)

001: MSYQGIDSAK KRILMIYLLV SLGLAHHFED EIDETIKEGF EKKEEMIEGE NDLYTVSIIF WVFRRYGHHI SSDVFRRFTK DNGNFKESLV GDAKGMLSLY
101: EAAYLRTTKD YIMDEALIFT SRHLESLAAD GTCPPHLSVR IRNALTLPQH WNMEMLFPVE YISFFEQEND HDEMLLKFAK ISFKLVQLQY LHELKILAES
201: EGWYSLGQLY ELSTELSRII VKYTNGTSLA KLPDTDPYQK TCSEGIS

Best Arabidopsis Sequence Match ( AT1G66020.1 )
(BLAST)

001: MEAKFGSQIS LHFRTNSFPL RKLYGFPLTT FSGTSLNHLR LKATNTLKGD DQESIRKFKK LPTSEWTHYF HSFVVDVSEM DALRNEIDAL KPKVKNTIMS
101: SQGIDSTKKR ILMIYMLVSL GLAHHFEEEI YETLRDGFGK IEEMMEDEDD LCTVSIIFWA FRRYGHYISS DVFRRFKGSN GNFKESLTGY AKGMLSLYEA
201: AHLGTTKDYI LQEALSFTSS HLESLAACGT CPPHLSVHIQ NVLSVPQHWN MEILVPVEYI PFYEQEKDHD EILLKFAKLS FKLLQLQYIQ DLKIVTKWYK
301: ELEFASKLPP YFRDNIVVNY FYVLAVIYTP QHSYERIMLT QYFTCLAILD DTFDRYASLP EAISLANSLE RWAPNDAMDK QPDYLKIVLN FILKTFEVFQ
401: KELEPEGRSY TVKATIEEFK TVTKGNFDLA KWAHAVHVPS FEEYMEVGEE EISVCSTLAG IFMCMEQKAT KEDYEWLKSR PKFIQTLCAR CRLKNDITGF
501: EDDMSRGYVT NAVNCYMKQY GVTKQEAFGE LNKIIVEADK ILNEEFLTTV GVRHCVLKAT FDLARMIFIT YNGYEGFTYP QGKIKEYMTS LFVDRIGL

Arabidopsis Description

TPS26Terpenoid synthase 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.