Factsheet for Bra025163.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13587	Canola	plastid	100.0	95.08
Bra000568.1-P	Field mustard	plastid	63.21	59.5
Bra000727.1-P	Field mustard	plastid	52.68	57.96
Bra021082.1-P	Field mustard	cytosol	54.46	55.86
VIT_13s0067g00300.t01	Wine grape	cytosol	15.36	54.43
VIT_13s0067g03770.t01	Wine grape	cytosol	33.39	53.89
VIT_13s0067g00090.t01	Wine grape	cytosol	33.39	53.43
VIT_13s0067g00320.t01	Wine grape	cytosol	10.71	50.85
VIT_00s2271g00010.t01	Wine grape	cytosol	35.0	49.62
VIT_00s0724g00010.t01	Wine grape	cytosol	37.68	49.41
Bra038504.1-P	Field mustard	plastid	46.07	48.04
VIT_13s0067g03740.t01	Wine grape	cytosol	36.07	47.87
VIT_13s0084g00010.t01	Wine grape	cytosol	46.96	47.73
Solyc02g079840.1.1	Tomato	cytosol	45.36	47.21
VIT_13s0067g03700.t01	Wine grape	cytosol	47.5	47.0
PGSC0003DMT400089009	Potato	cytosol	13.39	46.58
PGSC0003DMT400055897	Potato	cytosol	9.82	45.45
VIT_13s0067g00130.t01	Wine grape	plastid	40.71	43.76
VIT_13s0067g00370.t01	Wine grape	plastid	46.07	43.73
GSMUA_Achr4P07690_001	Banana	cytosol	13.04	42.69
VIT_13s0067g03790.t01	Wine grape	plastid	45.18	42.66
VIT_13s0019g00060.t01	Wine grape	plastid	44.64	42.09
Bra025164.1-P	Field mustard	cytosol	75.18	39.64
VIT_13s0067g03830.t01	Wine grape	plastid	30.54	38.86
KRH22502	Soybean	cytosol	8.75	28.0
Bra021563.1-P	Field mustard	cytoskeleton, cytosol, plastid	26.79	26.83
Bra021566.1-P	Field mustard	plastid	24.29	26.77
Bra027609.1-P	Field mustard	cytosol	13.57	26.39
Bra035927.1-P	Field mustard	mitochondrion, plastid	26.07	25.7
Bra012955.1-P	Field mustard	plastid	27.32	25.54
Bra012515.1-P	Field mustard	extracellular	10.89	24.7
Bra012513.1-P	Field mustard	cytosol	20.89	24.63
Bra020921.1-P	Field mustard	cytosol	17.68	24.44
Bra001557.1-P	Field mustard	plastid	25.89	24.01
Bra021560.1-P	Field mustard	plastid	25.18	23.42
Bra021564.1-P	Field mustard	plastid	25.18	23.38
Bra027079.1-P	Field mustard	plastid	13.75	23.12
Bra020953.1-P	Field mustard	plastid	25.18	23.11
Bra002714.1-P	Field mustard	plastid	24.29	23.09
Bra027931.1-P	Field mustard	plastid	24.11	22.46
Bra002165.1-P	Field mustard	cytosol	22.14	22.3
Bra028251.1-P	Field mustard	cytosol	21.61	21.72
Bra001555.1-P	Field mustard	plastid	23.57	21.71
Bra039519.1-P	Field mustard	cytosol	21.43	21.54
Bra002968.1-P	Field mustard	plastid	14.82	21.5

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	EnsemblPlantsGene:Bra025163	EnsemblPlants:Bra025163.1	EnsemblPlants:Bra025163.1-P
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010333	GO:GO:0016829	GO:GO:0046872	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf
UniProt:M4E8Q7	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF16	SUPFAM:SSF48239
SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI000253F77B	SEG:seg	:	:	:	:

Description

AT3G25820 (E=7e-250) ATTPS-CIN | ATTPS-CIN (terpene synthase-like sequence-1,8-cineole); (E)-beta-ocimene synthase/ myrcene synthase

Coordinates

chrA06:-:23032041..23034931

Molecular Weight (calculated)

65539.6 Da

IEP (calculated)

5.909

GRAVY (calculated)

-0.387

Length

560 amino acids

Sequence
(BLAST)

001: MTKMTSDDVS VDLCRRSGNY QPSPWDHHSL LAIKIKYANE KEVITRDVLK KKMKKILDVE LKTRLEQLEL IDDLQKLGIS HHFELEIKDI LTDLHHKNEK
101: HLWNCDKEED LHATALEFRL LRQHGFEISE DVFDVIVNKI ESATFKSDDI KSIITLYEAS YLSSKSDTKL YKVIRPFATE KLREYVNGDR DNETYKTREK
201: AIHALEMPYH WRMRRLETRW YIDAYEKKHD MNLALMELAK IDFNIVQASH QEELKYLSSW WKETCLSNQL PFVRDGIVEN YFWNVGIIYE PQFGYTRRFM
301: TIISALIITI DDIYDIYGTL EELELFTAMV DNWNVNGLDE LPEYMRLCFR VLYNEINGIG CDILKHKNIN VIPFLKKSWT DLCKAYLVEA KWYKRGYKPS
401: LEEYMQNAWI STSVPTMLIH FYCVFSDQIS IQILESLSEH GQNVVRCSAT VLRLANDLAT SPDELARGDV LKSVQCYMHE TGASEEEARG HVQQMISDTW
501: NEMNYEAKIA LLPRGFVEAT MNLARMSQCI YQHGDGHGRP DKAKTVERVM SLFVSPVPLD

Best Arabidopsis Sequence Match ( AT3G25830.1 )
(BLAST)

001: MATLRISSAL IYQNTLTHHF RLRRPHRFVC KSMTKTTPDT TLVELSRRSG NYQPSPWNHC YLLSIENKYA SETEVITRDV LKKKVKSMLD DEKKSRLEQL
101: ELIDDLQKLG VSYHFEIEIN DTLTDLHLKM GRNCWKCDKE EDLHATSLEF RLLRQHGFDV SENIFDVIID QIESNTFKTN NINGIISLYE ASYLSTKSDT
201: KLHKVIRPFA TEQIRKFVDD EDTKNIEVRE KAYHALEMPY HWRMRRLDTR WYIDAYEKKH DMNLVLIEFA KIDFNIVQAA HQEDLKYVSR WWKDTCLTNQ
301: LPFVRDRIVE NYFWTVGLIY EPQFGYIRRI MTIVNALVTT IDDIYDIYGT LEELELFTSM VENWDVNRLG ELPEYMRLCF LILYNEINGI GCDILKYKKI
401: DVIPYLKKSW ADLCRTYLVE AKWYKRGYKP SLEEYMQNAW ISISAPTILI HFYCVFSDQI SVQNLETLSQ HRQHIVRCSA TVLRLANDLG TSPTELARGD
501: VLKSVQCYMH ETGASEERAR DHVHQMISDM WDDMNSETKT ACNSSSRSRG FKEAAMNLAR MSQCMYQYGD GHGCPEKAKT IDRVQSLLVD PIPLDVNRLG

Arabidopsis Description

TPS271,8-cineole synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P0DI77]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.