Factsheet for Bra027609.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012515.1-P	Field mustard	extracellular	47.57	55.47
CDY13053	Canola	extracellular	91.32	47.56
VIT_18s0001g04200.t01	Wine grape	cytosol	15.62	37.82
PGSC0003DMT400050941	Potato	cytosol	32.29	37.2
Bra002968.1-P	Field mustard	plastid	47.92	35.75
AT1G48820.1	Thale cress	mitochondrion, plastid	68.4	35.12
AT1G48800.1	Thale cress	mitochondrion, plastid	73.26	34.99
Bra027931.1-P	Field mustard	plastid	71.53	34.28
PGSC0003DMT400075074	Potato	cytosol	23.96	33.17
Bra012513.1-P	Field mustard	cytosol	51.39	31.16
Bra002714.1-P	Field mustard	plastid	61.46	30.05
Bra020953.1-P	Field mustard	plastid	61.46	29.02
Bra028251.1-P	Field mustard	cytosol	55.56	28.73
Bra039519.1-P	Field mustard	cytosol	54.17	28.01
Solyc01g101220.1.1	Tomato	cytosol	16.32	27.98
Bra002165.1-P	Field mustard	cytosol	52.43	27.16
PGSC0003DMT400047124	Potato	cytosol	27.08	25.08
Bra020921.1-P	Field mustard	cytosol	35.07	24.94
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	26.39	24.52
Os02t0458100-01	Rice	plastid	31.94	23.53
VIT_18s0001g04510.t01	Wine grape	plastid	24.31	22.88
Bra021566.1-P	Field mustard	plastid	39.93	22.64
Bra001557.1-P	Field mustard	plastid	45.83	21.85
Bra021563.1-P	Field mustard	cytoskeleton, cytosol, plastid	41.32	21.29
Bra035927.1-P	Field mustard	mitochondrion, plastid	41.32	20.95
Bra001555.1-P	Field mustard	plastid	43.06	20.39
Bra021564.1-P	Field mustard	plastid	41.32	19.73
Bra021560.1-P	Field mustard	plastid	40.97	19.6
Solyc01g101190.2.1	Tomato	cytosol	37.15	19.38
Bra012955.1-P	Field mustard	plastid	40.28	19.37
KRG93110	Soybean	mitochondrion	17.71	17.23
VIT_18s0001g05430.t01	Wine grape	cytosol	28.82	17.22
Bra000727.1-P	Field mustard	plastid	29.17	16.5
Bra027079.1-P	Field mustard	plastid	18.4	15.92
Bra038504.1-P	Field mustard	plastid	27.08	14.53
Bra021082.1-P	Field mustard	cytosol	26.74	14.1
Bra000568.1-P	Field mustard	plastid	28.82	13.95
Bra025163.1-P	Field mustard	cytosol	26.39	13.57
PGSC0003DMT400079785	Potato	cytosol	11.46	10.61
PGSC0003DMT400070310	Potato	cytosol	11.46	10.61
Bra025164.1-P	Field mustard	cytosol	26.74	7.25
GSMUA_Achr6P24340_001	Banana	cytosol	0.0	0.0
GSMUA_Achr6P24330_001	Banana	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	EnsemblPlantsGene:Bra027609	EnsemblPlants:Bra027609.1	EnsemblPlants:Bra027609.1-P
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010333	GO:GO:0016829	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	UniProt:M4EFP7
PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31045	PANTHER:PTHR31045:SF4	SUPFAM:SSF48239	SUPFAM:SSF48576
InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI000254266E	SEG:seg

Description

AT1G48800 (E=6e-107) | terpene synthase/cyclase family protein

Coordinates

chrA09:+:12882218..12884812

Molecular Weight (calculated)

33743.9 Da

IEP (calculated)

5.125

GRAVY (calculated)

-0.110

Length

288 amino acids

Sequence
(BLAST)

001: MDALGREIEA LKPQVRNMFI SSKGIKKKIL FTYLLVTLGL AYHFEDEIVE TLKDGFQKIE EMMAGEDDLY TVSVIFYVFR TYGYNISSDV FGRFLGDHGE
101: FKECLTRDPK GILSLYEAAH MGTTTDYILD EALNFTLSNL ESLSCTCKPN LSRLIRNSLG LPQHKNMEIL VAEEFIRFYE KEEDSDLTLL KFSKLNFKFL
201: QLHYLQELKI LSKWYKEQDF HSKLPPYYRD VLVELNLHTL TYLEPKLSRV RIFLTKFYTM QIILDDTCDK YASLREVEIL VDIFESVV

Best Arabidopsis Sequence Match ( AT1G48800.1 )
(BLAST)

001: MEAIRVFGPK LGSRLSIRSH TTAFPACKLS RFPLTSFPGK HAHLVLLKAT TIPLASGDKE NNRKFEKLGP SEWGNQFLFA HVDLSEMDAL EREIEALKPK
101: VRDMFMSFKG MKSNKKNLFL IYLLVSLGLA HHFEDEIEES VKGCSQEMVE MMDGENDLYT VSIIFWVFRT YGHNISSDIF NRFKGHNGKF KECLATDAKG
201: ILSLYEAAHM GTTTDYILDE ALSFTLSYLE SLAANGTCKP NLVRRIRNAL GLLQNKNVEI LVAKEYIRFY EQEEDCDKTI LEFSMLNLKF LQLHYLQELK
301: LLTKWYKEQD FESKLPPYYR DRIVELHLAT LAYINPKYSR VRIILTMIYT IQIILDDTCD RYASLREVES LAATIERWDH NDHAMEGLPD YLKSVAKFIF
401: HTFQEFEREV SSESGGSYSL KATIEDCKRM MRSNLQLAKW AVTGHLPSFD EYLDVAGVEI AVYFTVAGIL LGMENINKKE AYEWLIFRDK LVRAMSTKAR
501: LVNDLFGYKD DMRRGYVTNS INCYKKQYGV TEEEAFRKLH QMVADGDKMM NEEFLKPINV PHQVLKAVLD TLRAINICYD NEDGFTRLNG NLKNYITSMY
601: VDL

Arabidopsis Description

TPS28Terpenoid synthase 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9C748]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.