Factsheet for Bra027931.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX95274	Canola	cytosol	21.3	96.24
CDY41707	Canola	plastid	91.35	94.33
CDX95273	Canola	plastid	65.06	93.32
Bra027609.1-P	Field mustard	cytosol	34.28	71.53
Bra012515.1-P	Field mustard	extracellular	23.13	56.28
Bra012513.1-P	Field mustard	cytosol	44.09	55.79
Bra002968.1-P	Field mustard	plastid	35.61	55.44
Bra020921.1-P	Field mustard	cytosol	35.27	52.35
Bra020953.1-P	Field mustard	plastid	53.08	52.3
Bra002714.1-P	Field mustard	plastid	50.08	51.1
Bra028251.1-P	Field mustard	cytosol	43.43	46.86
Bra002165.1-P	Field mustard	cytosol	42.43	45.86
Bra039519.1-P	Field mustard	cytosol	41.6	44.88
PGSC0003DMT400050941	Potato	cytosol	16.81	40.4
VIT_18s0001g04200.t01	Wine grape	cytosol	7.82	39.5
Bra001557.1-P	Field mustard	plastid	38.94	38.74
Bra021566.1-P	Field mustard	plastid	32.28	38.19
Bra001555.1-P	Field mustard	plastid	38.1	37.66
Bra021563.1-P	Field mustard	cytoskeleton, cytosol, plastid	34.94	37.57
Bra021560.1-P	Field mustard	plastid	37.6	37.54
PGSC0003DMT400075074	Potato	cytosol	12.81	37.02
Bra012955.1-P	Field mustard	plastid	35.61	35.73
Bra035927.1-P	Field mustard	mitochondrion, plastid	33.44	35.39
Bra021564.1-P	Field mustard	plastid	35.44	35.32
PGSC0003DMT400070310	Potato	cytosol	17.3	33.44
Solyc01g101190.2.1	Tomato	cytosol	30.62	33.33
Solyc01g101220.1.1	Tomato	cytosol	8.82	31.55
PGSC0003DMT400079785	Potato	cytosol	16.31	31.51
PGSC0003DMT400047124	Potato	cytosol	16.31	31.51
Os02t0458100-01	Rice	plastid	19.47	29.92
VIT_18s0001g04510.t01	Wine grape	plastid	14.97	29.41
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	14.64	28.39
Bra000727.1-P	Field mustard	plastid	21.63	25.54
Bra038504.1-P	Field mustard	plastid	22.63	25.33
Bra025163.1-P	Field mustard	cytosol	22.46	24.11
Bra000568.1-P	Field mustard	plastid	23.79	24.03
KRG93110	Soybean	mitochondrion	11.65	23.65
Bra021082.1-P	Field mustard	cytosol	21.3	23.44
VIT_18s0001g05430.t01	Wine grape	cytosol	16.47	20.54
Bra027079.1-P	Field mustard	plastid	10.82	19.52
GSMUA_Achr6P24340_001	Banana	cytosol	4.66	18.79
GSMUA_Achr6P24330_001	Banana	cytosol	4.33	18.44
Bra025164.1-P	Field mustard	cytosol	22.46	12.71

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	EnsemblPlantsGene:Bra027931	EnsemblPlants:Bra027931.1	EnsemblPlants:Bra027931.1-P
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010333	GO:GO:0016829	GO:GO:0046872	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf
UniProt:M4EGL7	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF25	SUPFAM:SSF48239
SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI00025421B5	SEG:seg	:	:	:	:

Description

AT1G48800 (E=5e-232) | terpene synthase/cyclase family protein

Coordinates

chrA09:-:9927010..9932563

Molecular Weight (calculated)

69292.1 Da

IEP (calculated)

6.009

GRAVY (calculated)

-0.310

Length

601 amino acids

Sequence
(BLAST)

001: MEAITVFGPK LGSKPSIHCH TNTFTSCRLS SFPSVSFPVK PPKLVPLKAT TNTLASKDEK NRKFKKLAPS EWGHQFVDAH VDVSEIDSLG REIEALKPKV
101: EDLFLSSSGV NSTKKNILFI YLLVSLGLAY HFEAEIEENL KEGLKMFEEM LSGEDDLYTV SIIFWVFRTY GHNVSSDVFR RFEGDNGKFK EYLTEDGKGI
201: LSLYEAAHMV TMRDYILDEA LSFAMSCLET LVASGTCQPH LSRRIQNALG QPQHKNAEIL VAREYIRFYE QEEDSDKTLL KFAKLNYKFL QLHYLQELKD
301: LSKWYKKKEF ESKLPPYYRD RLVELHLVTL PFFEPKYSRV RIMVTKLFVV QIILDDTCDR YASLREVESL ANAIERWDLD DAMDGQPDYL KFVLKHVFDT
401: FQEFEREVAS ELGGSYSFEA TIDACKRYAR ANLQLATWAE AYHVPSFEEY LEVAGVEVAV DFTIAGVLMA MKDICKKEAY EWLKSRDKLV IAMCTVTKVL
501: NDIHGYEDDM SRGYVTNSIN CYKKQYGVTE KEAFEKLHQI IANANKMINE ELLKPTNMPR QILKEMLNYQ RITNVSYEIG DEFTRPGGKL KSHVTSMYLD
601: L

Best Arabidopsis Sequence Match ( AT1G48800.1 )
(BLAST)

001: MEAIRVFGPK LGSRLSIRSH TTAFPACKLS RFPLTSFPGK HAHLVLLKAT TIPLASGDKE NNRKFEKLGP SEWGNQFLFA HVDLSEMDAL EREIEALKPK
101: VRDMFMSFKG MKSNKKNLFL IYLLVSLGLA HHFEDEIEES VKGCSQEMVE MMDGENDLYT VSIIFWVFRT YGHNISSDIF NRFKGHNGKF KECLATDAKG
201: ILSLYEAAHM GTTTDYILDE ALSFTLSYLE SLAANGTCKP NLVRRIRNAL GLLQNKNVEI LVAKEYIRFY EQEEDCDKTI LEFSMLNLKF LQLHYLQELK
301: LLTKWYKEQD FESKLPPYYR DRIVELHLAT LAYINPKYSR VRIILTMIYT IQIILDDTCD RYASLREVES LAATIERWDH NDHAMEGLPD YLKSVAKFIF
401: HTFQEFEREV SSESGGSYSL KATIEDCKRM MRSNLQLAKW AVTGHLPSFD EYLDVAGVEI AVYFTVAGIL LGMENINKKE AYEWLIFRDK LVRAMSTKAR
501: LVNDLFGYKD DMRRGYVTNS INCYKKQYGV TEEEAFRKLH QMVADGDKMM NEEFLKPINV PHQVLKAVLD TLRAINICYD NEDGFTRLNG NLKNYITSMY
601: VDL

Arabidopsis Description

TPS28Terpenoid synthase 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9C748]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.