CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
plastid 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029529.1-P	Field mustard	plastid	97.43	97.69
CDY21320	Canola	plastid	93.63	96.78
CDX86132	Canola	plastid	96.48	96.48
CDX90880	Canola	plastid	95.8	96.45
AT4G04910.1	Thale cress	plastid	92.28	91.78
CDY39223	Canola	cytosol, mitochondrion	13.69	88.6
VIT_19s0014g02750.t01	Wine grape	cytosol	78.46	78.35
KRH50033	Soybean	endoplasmic reticulum, nucleus	78.32	77.48
KRH20460	Soybean	endoplasmic reticulum	77.51	77.09
CDY34435	Canola	cytosol	71.82	72.4
GSMUA_Achr6P26250_001	Banana	cytosol	4.47	71.74
CDY32219	Canola	cytosol	71.41	71.41
Os05t0519400-01	Rice	plasma membrane	71.68	71.2
Zm00001d038808_P001	Maize	cytosol	71.41	71.12
EER93779	Sorghum	cytosol	71.41	70.93
PGSC0003DMT400076472	Potato	cytosol	75.75	70.76
TraesCS1B01G352200.2	Wheat	cytosol, mitochondrion	70.19	69.72
TraesCS1D01G341900.2	Wheat	cytosol	70.33	69.66
TraesCS1A01G339900.1	Wheat	unclear	70.33	69.48
Zm00001d051286_P013	Maize	cytosol	70.33	68.29
HORVU1Hr1G076180.22	Barley	cytosol	70.6	65.53
CDY09518	Canola	cytosol	39.97	64.41
PGSC0003DMT400076471	Potato	cytosol	15.58	59.28
KRH24495	Soybean	cytosol	16.53	52.14
Zm00001d000156_P001	Maize	cytosol	17.62	30.52
CDX96221	Canola	cytosol	2.57	15.45
CDY10163	Canola	nucleus	19.38	12.03
CDY06186	Canola	nucleus	19.51	11.99
CDY47705	Canola	nucleus	19.24	11.96
CDY10003	Canola	nucleus	19.38	11.94
CDX75809	Canola	nucleus	17.34	6.95
CDX82447	Canola	nucleus	17.21	6.92
Solyc07g062770.2.1	Tomato	nucleus	6.5	6.52

Protein Annotations

Gene3D:1.10.8.60	Gene3D:2.40.40.20	Gene3D:3.10.330.10	Gene3D:3.40.50.300	MapMan:50.3.6	GO:A0A078FV00
UniProt:A0A078FV00	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	InterPro:Asp_de-COase-like_dom_sf	InterPro:CDC48_domain_2-like_sf
InterPro:CDC4_N-term_subdom	EnsemblPlants:CDY16637	ProteinID:CDY16637	ProteinID:CDY16637.1	InterPro:Cdc48_dom2	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	EnsemblPlantsGene:GSBRNA2T00094473001	InterPro:P-loop_NTPase	PFAM:PF00004
PFAM:PF02933	ScanProsite:PS00674	PANTHER:PTHR23078	PANTHER:PTHR23078:SF11	SMART:SM00382	SMART:SM01073
SUPFAM:SSF50692	SUPFAM:SSF52540	SUPFAM:SSF54585	UniParc:UPI0004EE4BF4	SEG:seg	:

Description

BnaA09g20150DBnaA09g20150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FV00]

Coordinates

chrLK032066:+:186946..192661

Molecular Weight (calculated)

81204.1 Da

IEP (calculated)

6.259

GRAVY (calculated)

-0.078

Length

738 amino acids

Sequence
(BLAST)

001: MAGRSGSQVM TMTVTNTPSA DLAFTNLAYC SSSDLRQFSV PGSDLFLANN IFPCVVLFVM VIRDGSLALN AIQRRHARVS TGDMVSVSRF VPPENFELAM
101: LTLELEFVKK GTKSEQVDAA LLSTQLKRKY TNQVLTVGQK ATFEYHGTNY ILTVNRADVE GQNQSNGLER GMLSPDTYIV FEASNASGIK IVNQREAASS
201: NIFKHKEFNL ESLGIGGLGA EFADIFRRAF ASRVFPPHVT SRLGIKHVKG MLLFGPPGTG KTLMARQIGK MLNGKDPKVV NGPEVLSKFV GETEKNVRDL
301: FADAEQDQRT LGDASELHVI IFDEIDAICK SRGSTRDGTG VHDSIVNQLL TKIDGVEALN NVLLIGMTNR KDLLDEALLR PGRLEVQVEI SLPDEAGRFQ
401: ILQIHTNKMK EISFLGHDIN LQELAARTKN YSGAELEGVV KSATSYALNR QLSMDDLTKP VEEKNIKITM EDFLHAIHEV QPAFGASTDD LVRCRLNGMV
501: DSGDRHNHIY KRAMLLVEQV KVSTRSPLVT CLLEGPSGSG KTALAATVGI DSDFPYVKIV SAETMIGLQE STKCAHIVKV FEDAYKSPMS IIILDDIERL
601: LEYVAIGPRF SNIISQTLMV LLKRLPPKGK KLLVFGTTSQ LTFLDSVGIC EAFSITYSVP TLRTEDAKKV LKQLNVFSED DIDAAAEALD DMPIKKLYML
701: IEMAAQGEDG GSAEAIYAGR EKIKITHFFD CLQDVVRF

Best Arabidopsis Sequence Match ( AT4G04910.1 )
(BLAST)

001: MAGRYGSQVM TMTVTNTPSA DLAFTNLAYC SSSDLRQFSV PGSDLFLANV ADSFILSLCG HGSIRDGNIA LNAIQRRHAR VSTGDMVSVS RFVPPENFDL
101: AMLTLELEFV KKGTKSEQVD AALLSTQLKR KYTNQVLTVG QKATFEYHGT NYILTVNRAD VEGQDHTNGI ERGLLSKDTY IVFEASNASG IKIVNQREAA
201: SSNIFKHKEF NLESLGIGGL GAEFADIFRR AFASRVFPPH VTSRLGIKHV KGMLLFGPPG TGKTLMARQI GKMLNGKDPK IVNGPEVLSK FVGETEKNVR
301: DLFADAEQDQ RTLGDASELH VIIFDEIDAI CKSRGSTRDG TGVHDSIVNQ LLTKIDGVEA LNNVLLIGMT NRKDLLDEAL LRPGRLEVQV EISLPDEAGR
401: LQILQIHTNK MKENSFLGTD INLQELAART KNYSGAELEG VVKSATSYAL NRQLSMDDLT KPVEEENIKI TMEDFLHAIY EVQPAFGAST DDLERCRLNG
501: MVDCGHRHNH IYKRAMLLVE QVKVSTRSPL VTCLLEGPSG SGKTALAATI GIDSDFPYVK IVSAETMIGL SESTKCAHIV KVFEDAYKSP MSIIILDDIE
601: RLLEFIAIGP RFSNIISQTL MVLLKRLPPK GKKLLVFGTT SEVTFLESVG ISDCFSVTHS VPTLQKEDAK KVLNQLNLFS EDDVDSAAEA LNDMPIKKIY
701: MLIEMAAQGE NGGSAEAIYA GREKININHF YDCLGDFIRF TG

Arabidopsis Description

NSFNSF [Source:UniProtKB/TrEMBL;Acc:A0A178UTB9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.