Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82447 | Canola | nucleus | 93.71 | 94.06 |
| AT3G15120.2 | Thale cress | cytosol | 79.92 | 75.0 |
| Bra001584.1-P | Field mustard | nucleus | 63.05 | 61.38 |
| Solyc07g062760.1.1 | Tomato | nucleus | 26.53 | 44.29 |
| Zm00001d043928_P001 | Maize | cytosol, nucleus, plastid | 21.27 | 42.7 |
| KRH27288 | Soybean | nucleus | 40.91 | 41.54 |
| VIT_19s0014g02080.t01 | Wine grape | cytosol, plastid | 43.03 | 41.43 |
| KRH22028 | Soybean | nucleus | 41.73 | 41.21 |
| PGSC0003DMT400032278 | Potato | cytosol, mitochondrion, nucleus | 40.59 | 40.72 |
| GSMUA_Achr1P13870_001 | Banana | nucleus, plastid | 38.42 | 40.0 |
| OQU87303 | Sorghum | cytosol | 35.27 | 38.55 |
| HORVU3Hr1G061240.1 | Barley | cytosol | 38.14 | 38.21 |
| TraesCS3B01G272900.1 | Wheat | cytosol | 38.31 | 38.14 |
| TraesCS3A01G246500.2 | Wheat | cytosol | 37.93 | 37.95 |
| Zm00001d043927_P001 | Maize | plastid | 37.0 | 37.27 |
| TraesCS3D01G245000.1 | Wheat | cytosol | 38.04 | 34.77 |
| CDY39223 | Canola | cytosol, mitochondrion | 1.95 | 31.58 |
| CDY09518 | Canola | cytosol | 5.97 | 24.02 |
| CDY47705 | Canola | nucleus | 13.4 | 20.81 |
| CDY10163 | Canola | nucleus | 13.35 | 20.69 |
| CDY06186 | Canola | nucleus | 13.46 | 20.65 |
| CDY10003 | Canola | nucleus | 13.24 | 20.37 |
| CDY21320 | Canola | plastid | 7.0 | 18.07 |
| CDX96221 | Canola | cytosol | 1.19 | 17.89 |
| CDX90880 | Canola | plastid | 6.95 | 17.46 |
| CDY16637 | Canola | plastid | 6.95 | 17.34 |
| CDX86132 | Canola | plastid | 6.95 | 17.34 |
| CDY34435 | Canola | cytosol | 6.78 | 17.08 |
| CDY32219 | Canola | cytosol | 6.67 | 16.67 |
Protein Annotations
| Gene3D:1.10.8.60 | MapMan:14.3.1.1 | Gene3D:3.30.40.10 | Gene3D:3.40.50.300 | GO:A0A078CIA8 | InterPro:AAA+_ATPase |
| InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | EnsemblPlants:CDX75809 | ProteinID:CDX75809 | ProteinID:CDX75809.1 | InterPro:EPHD |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | EnsemblPlantsGene:GSBRNA2T00123764001 | InterPro:IPR013083 |
| InterPro:IPR034732 | InterPro:P-loop_NTPase | PFAM:PF00004 | PFAM:PF13771 | ScanProsite:PS00674 | PFscan:PS51805 |
| PANTHER:PTHR23069 | PANTHER:PTHR23069:SF3 | SMART:SM00382 | SUPFAM:SSF52540 | UniParc:UPI0004EC96A2 | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
BnaC03g38920D
Coordinates
chrLK031805:-:854280..861052
Molecular Weight (calculated)
202392.0 Da
IEP (calculated)
5.131
GRAVY (calculated)
-0.549
Length
1843 amino acids
Sequence
(BLAST)
(BLAST)
0001: MRSSGSPSGR KSKKLAAICE EEYNKNHGEP KDRDAAPAAD SELRRSSRVR RIPSILDASP PPAKKRRRLN RSSRGSSSSR VVEEENDDSD NWKSRLRSRS
0101: RRRNAGSQAR SVVKRKRKLV FGNGDGNEVR DKAPNGGKLM KGKKRVGVKE FESWEDEENE SDNSNAEEES ASESEESADS EAAEEDEKVK KATKRSVVLE
0201: SEDEAEVDGA EAESEDEAES TENETEDSAS EAHGSAEKEG SEVEGNVDGT AAETDVRMEE VEKESGDQVE GLENEIETEV EGTESKELGA MVFESGNGTG
0301: TLGDGSDVAD NVKTKQGDTL DPELLQKAAI EVNESLKQSD DTGEQGASRT TSTDKANDKV GESVEMLDEL PIQNETCNKV VDSVCTSSDR LGKPPFKQAR
0401: RCGLCGVGTD GKLPKKLIQD NGDSDVEAHS GSSSSGEPNY DILDGFGDEP GWLGRLLGPI NDRYGISGTW VHQHCAVWSP EVYFAGVGRL KNIRAALCRG
0501: RSLKCTRCER PGATIGCRVD RCPRTYHLPC ARANGCIFDH RKFLIACTDH RHHFQPHGRQ CQVRMKKMKT KKMRLEMRKH SNDAWRKDVE AEEKWFEKCG
0601: DDEEFLKRES KRLQRDLLRV APEYIGGSES ENGKAFEGWD SVAGLEGVTQ CMKEVVLLPL LYPEFFDNLG LTPPRGILLH GHPGTGKTLV VRALIGSLAR
0701: GNRRIAYFAR KGADCLGKYV GDAERQLRLL FQVAEKCQPS IIFFDEIDGL APKRSRQQDQ THSSVVSTLL ALLDGLKSRG SVVVIGATNY PDAIDPALRR
0801: PGRFDREIYF PLPSLDDRAA IISLHTRKWP KPVSGYLLKW VAKETAGFAG ADIQALCTQA AMIALNRSFP LQESLAAAEL GISRSNRVAL PSFSVEERDW
0901: LEALSRSPPP CSRRGAGKAA SDIYSSPLPV YLVPSLLPSL CSLLVAFHLE ERIVLPPLLS KAAVDFKNVI CSALGDKKIN DDCWWSHVDS LLQDVDVVKD
1001: IVQRLSYAGI LDGGCDSVRS VPSSPGAGDC SLGSAQFMVH RVRRHPGLGN APSESMNKSG FQLLIAGGPR SGQRHLASCI LHCFIGNAEM QKIDTATISQ
1101: EGNGDLVLGV THLLMKCSSR KSCVVFMPRI DLWAVETETP LNEEVECDDD SLKENSSPVR PETVEKMELQ YSSRVSHAWN TFLEQVESLR VSTKMIILAT
1201: SGMPYKLLPP KIQQFFKTDL SKEYQPTKSE AVPQFTVQIA ESSDQDMAID LSATELSRRA IQVFLHLVHQ GTHTHYDVPK TYEREDPDQD CRDPAYQNNT
1301: DHVAGEEVGI KSKPPEDCSL KVPPIPISIT AKPKSSLELA VSTFGYQILR YPQFAELCWV TSKLKEGPSA DVSGPWRGWP FNSCIIRPHN PSEQSTTASG
1401: SNNVRGKDLS GTARGLVAVG LSAYRGTYTS LREVSFEVRK VLELLVGRIN MKIDAGKDRC QYIRILSQVA YLEDLVNSWV YAMRSFESNA QTESMNPLSC
1501: SVADATVRDE PTEQGTSDRS KGDLKEDTQN INCPDPRAST DLTDNHQPVV EITDGLVLIK ENGDDTSNSA MLIEDSGVVS LHQTVLLDLN SPAADHEQNE
1601: TQTTATVTCL QEKDNSENNH VGSGESNSIS QEDPKKSADS SNGEAVHGLE SANSMPEPVK QVEITARISP LDDPSLVCFY RCCPQCVSIL QDSMRKLVTR
1701: ELRLGRSHIT TEGIHDAVSS LSVELIAAVR KFISARNNGG TQEVEVEERD GNSEKEACPC KSSPSNNFLA SAECCSHSAE EQGSLDKANA SPSAKSWLEP
1801: VFVFRDGILV PVCTEDDCAL HCRYDSLCLS SLVELVATEM KPF
0101: RRRNAGSQAR SVVKRKRKLV FGNGDGNEVR DKAPNGGKLM KGKKRVGVKE FESWEDEENE SDNSNAEEES ASESEESADS EAAEEDEKVK KATKRSVVLE
0201: SEDEAEVDGA EAESEDEAES TENETEDSAS EAHGSAEKEG SEVEGNVDGT AAETDVRMEE VEKESGDQVE GLENEIETEV EGTESKELGA MVFESGNGTG
0301: TLGDGSDVAD NVKTKQGDTL DPELLQKAAI EVNESLKQSD DTGEQGASRT TSTDKANDKV GESVEMLDEL PIQNETCNKV VDSVCTSSDR LGKPPFKQAR
0401: RCGLCGVGTD GKLPKKLIQD NGDSDVEAHS GSSSSGEPNY DILDGFGDEP GWLGRLLGPI NDRYGISGTW VHQHCAVWSP EVYFAGVGRL KNIRAALCRG
0501: RSLKCTRCER PGATIGCRVD RCPRTYHLPC ARANGCIFDH RKFLIACTDH RHHFQPHGRQ CQVRMKKMKT KKMRLEMRKH SNDAWRKDVE AEEKWFEKCG
0601: DDEEFLKRES KRLQRDLLRV APEYIGGSES ENGKAFEGWD SVAGLEGVTQ CMKEVVLLPL LYPEFFDNLG LTPPRGILLH GHPGTGKTLV VRALIGSLAR
0701: GNRRIAYFAR KGADCLGKYV GDAERQLRLL FQVAEKCQPS IIFFDEIDGL APKRSRQQDQ THSSVVSTLL ALLDGLKSRG SVVVIGATNY PDAIDPALRR
0801: PGRFDREIYF PLPSLDDRAA IISLHTRKWP KPVSGYLLKW VAKETAGFAG ADIQALCTQA AMIALNRSFP LQESLAAAEL GISRSNRVAL PSFSVEERDW
0901: LEALSRSPPP CSRRGAGKAA SDIYSSPLPV YLVPSLLPSL CSLLVAFHLE ERIVLPPLLS KAAVDFKNVI CSALGDKKIN DDCWWSHVDS LLQDVDVVKD
1001: IVQRLSYAGI LDGGCDSVRS VPSSPGAGDC SLGSAQFMVH RVRRHPGLGN APSESMNKSG FQLLIAGGPR SGQRHLASCI LHCFIGNAEM QKIDTATISQ
1101: EGNGDLVLGV THLLMKCSSR KSCVVFMPRI DLWAVETETP LNEEVECDDD SLKENSSPVR PETVEKMELQ YSSRVSHAWN TFLEQVESLR VSTKMIILAT
1201: SGMPYKLLPP KIQQFFKTDL SKEYQPTKSE AVPQFTVQIA ESSDQDMAID LSATELSRRA IQVFLHLVHQ GTHTHYDVPK TYEREDPDQD CRDPAYQNNT
1301: DHVAGEEVGI KSKPPEDCSL KVPPIPISIT AKPKSSLELA VSTFGYQILR YPQFAELCWV TSKLKEGPSA DVSGPWRGWP FNSCIIRPHN PSEQSTTASG
1401: SNNVRGKDLS GTARGLVAVG LSAYRGTYTS LREVSFEVRK VLELLVGRIN MKIDAGKDRC QYIRILSQVA YLEDLVNSWV YAMRSFESNA QTESMNPLSC
1501: SVADATVRDE PTEQGTSDRS KGDLKEDTQN INCPDPRAST DLTDNHQPVV EITDGLVLIK ENGDDTSNSA MLIEDSGVVS LHQTVLLDLN SPAADHEQNE
1601: TQTTATVTCL QEKDNSENNH VGSGESNSIS QEDPKKSADS SNGEAVHGLE SANSMPEPVK QVEITARISP LDDPSLVCFY RCCPQCVSIL QDSMRKLVTR
1701: ELRLGRSHIT TEGIHDAVSS LSVELIAAVR KFISARNNGG TQEVEVEERD GNSEKEACPC KSSPSNNFLA SAECCSHSAE EQGSLDKANA SPSAKSWLEP
1801: VFVFRDGILV PVCTEDDCAL HCRYDSLCLS SLVELVATEM KPF
0001: MKSSHEVTKN HSGSPSGKKS KKLAAICEEE YKKNHGESQD RDGGSGLACA DSELRRSSRV RKIPSILDAS PPPPKKRQRF NKSSSSIEKG KRNEDGDSDA
0101: PDGWKSRLRS RRKKNVGFQA SGRQRRVVKG KRKLVFRNRA CELSEKAEAS DREEEKGALK GGKLNKAKKP VDVKESESSE DGGKESDTSN SEDVQKESDT
0201: SNSEDESASE SEESMQADSA AREKYQEKKA TKRSVFLESE NEAEVDRTET ESEDGTDSTD NEIDDSDEEG ESETQCSAEK TGSETEANVE EMRADTNVTM
0301: EAVQNESRNQ MEELENEIEM GVEDEKKEMS VIVSESGNGT GIREDENKEM DVIVSESGNG TGILEGENKK MEVMVSGSGN GTGIREDDSD FAAKVKNREG
0401: DTLHPELLGE ASTEINESLK QNDDIGEQGV SRTPSNNKTK EHNEFLDRGG ESVEMPDELP IQNETCKKAV DSVSTSSDRL GKPLFKQTRR CGLCGVGTDG
0501: KLPKKLMQDN GDSDVEAPSG SSSSEEQKYD ILDGFGDDPG WLGRLLGPIN DRYGISGTWV HQNCAVWSPE VYFAGVGCLK NIRAALFRGR SLKCTRCDRP
0601: GATTGCRVDR CPRTYHLPCA RANGCIFDHR KFLIACTDHR HHFQPHGRQC QVRMTKMKTK RMRLEMKKHS NDAWRKDVEA EEKWFEKCGE DEEFLKRESK
0701: RLHRDLLRVA PEYIGGSDSE SGKAFEGWDS VAGLEGVTQC MKEVVLIPLL YPEFFDNLGL TPPRGILLHG HPGTGKTLVV RALIGSLARG NRRIAYFARK
0801: GADCLGKYVG DAERQLRLLF QVAEKCQPSI IFFDEIDGLA PKRSRQQDQT HSSVVSTLLA LLDGLKSRGS VVVIGATNYP DAIDPALRRP GRFDREIYFP
0901: LPSVDDRAAI ISLHTRKWPK PVSGYLLKWI AKETAGFAGA DIQALCTQAA MIALNRSFPL QESLAAAELG VSSSNRAALP SFSVEERDWL EALSRSPPPC
1001: SRRGAGIAAS DIFSSPLPTY LVPSLLPPLC SLLVALHLDE RIFLPPLLSK AAVDVQNVIR SALSDKKITE GCWWSHVDTL LHEVDVVKDI VQRLSCTGIL
1101: DGGCDLVGSV ASIPGTGDCS LGSAKFMVPR VCRHPGVLGN ASVESTSKSG FQLLIAGGPK SGQRHLASCV LHCFIGNAEM LKIDTATISQ EGNGDLVLGV
1201: THLLIKCASK KSCVVFMPRV DLWAVKTETP LNEEVECDDD SVQENCSEMG EEKALQNGVR VSHAWNTFFE QVETLRVSTK MMILATSGMP YKLLPPKIQQ
1301: FFKTDLSKEC QPTMSEAVPQ FNVQVVESSD QDIAIDLSAT ELLRRAIQVF LHLVHQGSHT HCGLKKKYKG EDLDQGCRDA APQNNTDHRA GEEAVVKSKR
1401: LDDGSLKVPP LPININVKPK SSLQLAVSTF GYQILQYPQF AELCWVTSKL KEGPSADVSG PWRGWPFNSC ITRPCNSSEQ TITSSDSNNV KGKDSTGIVR
1501: GLTAVGLSAY RGTYISLREV SFEVRKVLEL LVGRISVKIN AGKDRCRYIR ILSQVAYLED LVNSWVYAMR SFESTTQTES TNPLPCSVVN PSVRNEPTEQ
1601: GTSDQLKGSE EDLKEDTQNM NCPDPIASSN LTDNHQPVVE IANGHNGTNH ESFLEDTGHL TTHSTDGLTL VKENVDVISD TEMMIEDSGV NPFRQAVLLD
1701: LNSPAADHEQ NETPHGSCEV ETTGTVISLQ EKADSLDNPN GSGDSNSISL EDPHKSADSN NGKAWDGVHG LESANNMPEP VEQVETTGRT NPQDDPSLVC
1801: LYRCCSQCVS ILQDSMHKLV TRELRLGRSS ITTEGIHDAV SSLSVELISA VRKFISVKNN GTMQEAKVKD HEECPENEAC FCKRLSGNFL ASVECCSHSA
1901: EMQGSLDEGN TYRRPKTWLE PVFVFKDGIL VPVSTEDDRS LHCKYDSFCL GSLIELIATE MKPF
0101: PDGWKSRLRS RRKKNVGFQA SGRQRRVVKG KRKLVFRNRA CELSEKAEAS DREEEKGALK GGKLNKAKKP VDVKESESSE DGGKESDTSN SEDVQKESDT
0201: SNSEDESASE SEESMQADSA AREKYQEKKA TKRSVFLESE NEAEVDRTET ESEDGTDSTD NEIDDSDEEG ESETQCSAEK TGSETEANVE EMRADTNVTM
0301: EAVQNESRNQ MEELENEIEM GVEDEKKEMS VIVSESGNGT GIREDENKEM DVIVSESGNG TGILEGENKK MEVMVSGSGN GTGIREDDSD FAAKVKNREG
0401: DTLHPELLGE ASTEINESLK QNDDIGEQGV SRTPSNNKTK EHNEFLDRGG ESVEMPDELP IQNETCKKAV DSVSTSSDRL GKPLFKQTRR CGLCGVGTDG
0501: KLPKKLMQDN GDSDVEAPSG SSSSEEQKYD ILDGFGDDPG WLGRLLGPIN DRYGISGTWV HQNCAVWSPE VYFAGVGCLK NIRAALFRGR SLKCTRCDRP
0601: GATTGCRVDR CPRTYHLPCA RANGCIFDHR KFLIACTDHR HHFQPHGRQC QVRMTKMKTK RMRLEMKKHS NDAWRKDVEA EEKWFEKCGE DEEFLKRESK
0701: RLHRDLLRVA PEYIGGSDSE SGKAFEGWDS VAGLEGVTQC MKEVVLIPLL YPEFFDNLGL TPPRGILLHG HPGTGKTLVV RALIGSLARG NRRIAYFARK
0801: GADCLGKYVG DAERQLRLLF QVAEKCQPSI IFFDEIDGLA PKRSRQQDQT HSSVVSTLLA LLDGLKSRGS VVVIGATNYP DAIDPALRRP GRFDREIYFP
0901: LPSVDDRAAI ISLHTRKWPK PVSGYLLKWI AKETAGFAGA DIQALCTQAA MIALNRSFPL QESLAAAELG VSSSNRAALP SFSVEERDWL EALSRSPPPC
1001: SRRGAGIAAS DIFSSPLPTY LVPSLLPPLC SLLVALHLDE RIFLPPLLSK AAVDVQNVIR SALSDKKITE GCWWSHVDTL LHEVDVVKDI VQRLSCTGIL
1101: DGGCDLVGSV ASIPGTGDCS LGSAKFMVPR VCRHPGVLGN ASVESTSKSG FQLLIAGGPK SGQRHLASCV LHCFIGNAEM LKIDTATISQ EGNGDLVLGV
1201: THLLIKCASK KSCVVFMPRV DLWAVKTETP LNEEVECDDD SVQENCSEMG EEKALQNGVR VSHAWNTFFE QVETLRVSTK MMILATSGMP YKLLPPKIQQ
1301: FFKTDLSKEC QPTMSEAVPQ FNVQVVESSD QDIAIDLSAT ELLRRAIQVF LHLVHQGSHT HCGLKKKYKG EDLDQGCRDA APQNNTDHRA GEEAVVKSKR
1401: LDDGSLKVPP LPININVKPK SSLQLAVSTF GYQILQYPQF AELCWVTSKL KEGPSADVSG PWRGWPFNSC ITRPCNSSEQ TITSSDSNNV KGKDSTGIVR
1501: GLTAVGLSAY RGTYISLREV SFEVRKVLEL LVGRISVKIN AGKDRCRYIR ILSQVAYLED LVNSWVYAMR SFESTTQTES TNPLPCSVVN PSVRNEPTEQ
1601: GTSDQLKGSE EDLKEDTQNM NCPDPIASSN LTDNHQPVVE IANGHNGTNH ESFLEDTGHL TTHSTDGLTL VKENVDVISD TEMMIEDSGV NPFRQAVLLD
1701: LNSPAADHEQ NETPHGSCEV ETTGTVISLQ EKADSLDNPN GSGDSNSISL EDPHKSADSN NGKAWDGVHG LESANNMPEP VEQVETTGRT NPQDDPSLVC
1801: LYRCCSQCVS ILQDSMHKLV TRELRLGRSS ITTEGIHDAV SSLSVELISA VRKFISVKNN GTMQEAKVKD HEECPENEAC FCKRLSGNFL ASVECCSHSA
1901: EMQGSLDEGN TYRRPKTWLE PVFVFKDGIL VPVSTEDDRS LHCKYDSFCL GSLIELIATE MKPF
Arabidopsis Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LIM2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.