CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY10003	Canola	nucleus	96.92	97.16
Bra032449.1-P	Field mustard	nucleus	97.75	96.55
CDY47705	Canola	nucleus	91.01	92.08
CDY10163	Canola	nucleus	90.26	91.17
AT1G05910.1	Thale cress	nucleus	89.01	88.35
VIT_05s0102g00260.t01	Wine grape	nucleus	70.36	69.38
Solyc04g076180.2.1	Tomato	nucleus	67.86	68.26
KRH24642	Soybean	cytosol, nucleus	68.03	68.03
KRH29644	Soybean	nucleus	67.53	67.81
Zm00001d021145_P003	Maize	plasma membrane	61.2	61.66
EER97044	Sorghum	cytosol	61.37	61.57
TraesCS5B01G299500.1	Wheat	nucleus	61.62	61.51
GSMUA_Achr10P...	Banana	nucleus	55.04	61.43
TraesCS5A01G302000.1	Wheat	nucleus	61.37	61.42
TraesCS5D01G306800.1	Wheat	nucleus	61.28	61.18
HORVU5Hr1G078780.1	Barley	nucleus	61.37	60.86
Os09t0515100-02	Rice	cytosol	60.62	60.77
GSMUA_Achr11P...	Banana	nucleus	57.45	57.69
CDY39223	Canola	cytosol, mitochondrion	3.41	35.96
CDY09518	Canola	cytosol	9.16	24.02
CDY21320	Canola	plastid	11.91	20.03
CDX90880	Canola	plastid	11.99	19.65
CDX86132	Canola	plastid	11.99	19.51
CDY16637	Canola	plastid	11.99	19.51
CDY34435	Canola	cytosol	11.66	19.13
CDY32219	Canola	cytosol	11.41	18.56
CDX96221	Canola	cytosol	1.67	16.26
CDX75809	Canola	nucleus	20.65	13.46
CDX82447	Canola	nucleus	20.4	13.34

Protein Annotations

Gene3D:1.10.8.60	Gene3D:1.20.920.10	Gene3D:3.40.50.300	MapMan:35.1	GO:A0A078EYE3	InterPro:AAA+_ATPase
InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	InterPro:Bromodomain	InterPro:Bromodomain-like_sf	EnsemblPlants:CDY06186	ProteinID:CDY06186
ProteinID:CDY06186.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
EnsemblPlantsGene:GSBRNA2T00122083001	InterPro:IPR001487	InterPro:IPR036427	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF00439
PRINTS:PR00503	ScanProsite:PS00674	PFscan:PS50014	PANTHER:PTHR23069	PANTHER:PTHR23069:SF0	SMART:SM00297
SMART:SM00382	SUPFAM:SSF47370	SUPFAM:SSF52540	UniParc:UPI0004EEBFE0	SEG:seg	:

Description

BnaA09g50170D

Coordinates

chrLK031968:+:172233..177798

Molecular Weight (calculated)

132952.0 Da

IEP (calculated)

5.659

GRAVY (calculated)

-0.575

Length

1201 amino acids

Sequence
(BLAST)

0001: MLPKGSSQGD ETDAKPVRSS DRLRRRPRLY GRSCYYYSPN MVHNRKRKNT KTRTAASQIA KMLHKGNKPA RASNAAPDAS DLRRSTRKRR ISVNLEDYTD
0101: SSGAEDEDMM SPAYRTSRSR VNNGVHRNFS ASKSRKTLEA ESAPRREGLR PRRSKILANK RLKTESGANR DSSEEKDGQD ETENGNELDD HDADDGENEV
0201: EEEEDGDDDV DVDEEQEGRK RYDLRNRDEV RRMPTEEFNK QQQPRSPRRV LHQGIGTRAG RDVRRGGSRL HKRHRSTRTD DSDDSLLVDE LDQGLAIPWA
0301: RGGNRSGPPW LFGGMDMHGS SSLGLNVGAS GWGHQSDGLT ALTSGVQTAG PSSKGGADIQ PLQINEDINF DDIGGLSEYI NDLKEMVFFP LLYPEFFASY
0401: NITPPRGVLL CGPPGTGKTL IARALACAAS KAGQKVSFYM RKGADVLSKW VGEAERQLKL LFEEAQRNQP SIIFFDEIDG LAPVRSSKQE QIHNSIVSTL
0501: LALMDGLDSR GQVVLIGATN RVDAIDGALR RPGRFDREFT FSLPGCEARA EILDIHTRKW KNPPTRELKE ELAASCVGYC GADLKALCTE AAIRAFREKY
0601: PQVYTSDDKY AIDVGLVKVN KSHFVEAMSA ITPAAHRGSV VQSRPLSPVV LPCLQPHLLK SMSLISDIFP SSAMSSEFTK LSMLSFGSAI PLVYRPRLLL
0701: LGGEGVGLDH LGPAILHELE KFPIHSLGLP SLLSDPGAKT PEEALVHIFT EARRTTPSIL YIPMFNNWWE NAHEQLRAVF LTLLEELPSN LPILLLATSY
0801: GELSDIEDQP VFDNRSVYTV DKPSSEDRSL FFDRLIEAAL SVISGLNGKP DGSQALPELP KVVKEPTGPK PAEIKAKVEA EQHALRRLRM CLRDVCNRIL
0901: YDKRFSAFHF PVTDEDAPNY RSIIQNPMDT ATLLQRVDAG QYLTCSPFLQ DVDLIVKNAK AYNGDDYAGA RIVSRAYELR DVVLGMLSQM DPALLTYCDK
1001: IAAQGGPSQI PDDLNGSILG LAPVVQMGTV TRSSARLRNL QPEVNIDRDY EGLKKPKKTA DVVCTDSAAD KHQDPDVEMT SVEAAGNSNS PAPCSADGDE
1101: EDQSEQPSRK EEEACAEEVS GDCSRDSVKP DQDISSGIES VKGVLMERTE NYSIPQMERV YTRIMKGVLE TLDKGLSDDD QSPKHSILRF LSEFAQLQAN
1201: F

Best Arabidopsis Sequence Match ( AT1G05910.1 )
(BLAST)

0001: MHPKRSSQGD GSVTKPVRTS DRLRRRPKLH GRSYLYYSSP NMLHNRKRNT KTRTAASQIA KMLHKGNRPA RASNAAPIAS DLRRSTRKRR ISVNLEDYTD
0101: SSGAEDEDMM SPAYRTLRRR VHKNFSTSKS RKDMDAELAP RREGLRPRRS TTIANKRLKT ESGADQDTSE EKDGQDETEN GNELDDADDG ENEVEAEDEG
0201: NGEDEGDGED EGEEDGDDDE EGDEEQEGRK RYDLRNRAEV RRMPTGEINK QQQPRSPRRV LHQGMGTRVG RDGRRGGSRP HKRHRFTRTD DSDDSLLVDE
0301: LDQGPAIPWA RGGNRSGAPW LFGGLDTYGS SSLGLNVGAS GWGHQSDGLA ALTSGVQTAG PSSKGGADIQ PLQINEDINF DDIGGLSEYI NDLKEMVFFP
0401: LLYPEFFASY SITPPRGVLL CGPPGTGKTL IARALACAAS KAGQKVSFYM RKGADVLSKW VGEAERQLKL LFEEAQRNQP SIIFFDEIDG LAPVRSSKQE
0501: QIHNSIVSTL LALMDGLDSR GQVVLIGATN RVDAIDGALR RPGRFDREFN FSLPGCEARA EILDIHTRKW KHPPTRELKE ELAATCVGYC GADLKALCTE
0601: AAIRAFREKY PQVYTSDDKY AIDVGLVNVE KSHFVEAMSA ITPAAHRGSV VQSRPLSPVV LPCLHRHLLE SMSLISDIFP SSATSSELTK LSILTFGSAI
0701: PLVYRPRLLL LGGEGVGLDH LGPAILHELE KFPIHSLGLP SLLSDPGAKT PEEALVHIFS EARRTTPSIL YIPMFNNWWE NAHEQLRAVF LTLLEELPSN
0801: LPILLLATSY GELSDMEEQS VFDNRSVYTV DKPSSEDRSL FFDRLIEAAL SVISGLNGKP DGPQPLPELP KVPKEPTGPK PAEVKAKVEA EQHALRRLRM
0901: CLRDVCNRIL YDKRFSAFHF PVTDEDAPNY RSIIQIPMDT ATLLQRVDTG QYLTCTPFLQ DVDLIVRNAK AYNGDDYAGA RIVSRAYELR DVVHGMLSQM
1001: DPALLTYCDK IAAEGGPSLI PDDLSGSILG LAPVVQMGTV TRTSARLRNV QPEVNLDRDY EGLKKPKKTT DAVSIDSAAD KSQNQDSGQE MPSPDAANPQ
1101: SAAPSPTDGD REDQSEPPSK EASAEDMSGD SCKGPAAKSD KEISSRTESV KGVFMERTDN YSIPQMERLY TRIMKGVLET LDKGLRDDDN NPKHSILRFL
1201: SEFAQHQANF

Arabidopsis Description

ATPase family AAA domain-containing protein At1g05910 [Source:UniProtKB/Swiss-Prot;Acc:F4IAE9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.