Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47705 | Canola | nucleus | 88.18 | 89.89 |
| CDY10163 | Canola | nucleus | 87.6 | 89.15 |
| Bra015464.1-P | Field mustard | nucleus | 88.93 | 89.15 |
| CDY06186 | Canola | nucleus | 88.35 | 89.01 |
| Bra032449.1-P | Field mustard | nucleus | 89.42 | 88.98 |
| CDY10003 | Canola | nucleus | 87.52 | 88.4 |
| VIT_05s0102g00260.t01 | Wine grape | nucleus | 71.41 | 70.94 |
| Solyc04g076180.2.1 | Tomato | nucleus | 69.01 | 69.93 |
| KRH24642 | Soybean | cytosol, nucleus | 68.51 | 69.03 |
| KRH29644 | Soybean | nucleus | 67.77 | 68.56 |
| TraesCS5B01G299500.1 | Wheat | nucleus | 62.15 | 62.51 |
| TraesCS5A01G302000.1 | Wheat | nucleus | 61.98 | 62.5 |
| TraesCS5D01G306800.1 | Wheat | nucleus | 61.9 | 62.26 |
| HORVU5Hr1G078780.1 | Barley | nucleus | 62.07 | 62.01 |
| Zm00001d021145_P003 | Maize | plasma membrane | 60.99 | 61.91 |
| EER97044 | Sorghum | cytosol | 61.24 | 61.9 |
| GSMUA_Achr10P... | Banana | nucleus | 55.04 | 61.9 |
| Os09t0515100-02 | Rice | cytosol | 61.07 | 61.69 |
| GSMUA_Achr11P... | Banana | nucleus | 57.77 | 58.44 |
| AT4G04910.1 | Thale cress | plastid | 11.65 | 19.0 |
| AT3G15120.2 | Thale cress | cytosol | 20.33 | 12.53 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:1.20.920.10 | Gene3D:3.40.50.300 | MapMan:35.1 | EntrezGene:837101 | InterPro:AAA+_ATPase |
| ProteinID:AAF29398.1 | ProteinID:AEE27917.1 | ArrayExpress:AT1G05910 | EnsemblPlantsGene:AT1G05910 | RefSeq:AT1G05910 | TAIR:AT1G05910 |
| RefSeq:AT1G05910-TAIR-G | EnsemblPlants:AT1G05910.1 | TAIR:AT1G05910.1 | InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | EMBL:AY056785 |
| Unigene:At.26297 | EMBL:BT002728 | InterPro:Bromodomain | InterPro:Bromodomain-like_sf | UniProt:F4IAE9 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003682 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006259 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016787 |
| GO:GO:0016887 | GO:GO:0031936 | GO:GO:0040029 | GO:GO:0042393 | GO:GO:0045944 | GO:GO:0080111 |
| InterPro:IPR001487 | InterPro:IPR036427 | RefSeq:NP_563753.1 | InterPro:P-loop_NTPase | PFAM:PF00004 | PFAM:PF00439 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020100 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PRINTS:PR00503 | ScanProsite:PS00674 | PFscan:PS50014 | PANTHER:PTHR23069 | PANTHER:PTHR23069:SF0 | SMART:SM00297 |
| SMART:SM00382 | SUPFAM:SSF47370 | SUPFAM:SSF52540 | UniParc:UPI0000162C7C | SEG:seg | : |
Description
ATPase family AAA domain-containing protein At1g05910 [Source:UniProtKB/Swiss-Prot;Acc:F4IAE9]
Coordinates
chr1:+:1790216..1796715
Molecular Weight (calculated)
133791.0 Da
IEP (calculated)
5.641
GRAVY (calculated)
-0.627
Length
1210 amino acids
Sequence
(BLAST)
(BLAST)
0001: MHPKRSSQGD GSVTKPVRTS DRLRRRPKLH GRSYLYYSSP NMLHNRKRNT KTRTAASQIA KMLHKGNRPA RASNAAPIAS DLRRSTRKRR ISVNLEDYTD
0101: SSGAEDEDMM SPAYRTLRRR VHKNFSTSKS RKDMDAELAP RREGLRPRRS TTIANKRLKT ESGADQDTSE EKDGQDETEN GNELDDADDG ENEVEAEDEG
0201: NGEDEGDGED EGEEDGDDDE EGDEEQEGRK RYDLRNRAEV RRMPTGEINK QQQPRSPRRV LHQGMGTRVG RDGRRGGSRP HKRHRFTRTD DSDDSLLVDE
0301: LDQGPAIPWA RGGNRSGAPW LFGGLDTYGS SSLGLNVGAS GWGHQSDGLA ALTSGVQTAG PSSKGGADIQ PLQINEDINF DDIGGLSEYI NDLKEMVFFP
0401: LLYPEFFASY SITPPRGVLL CGPPGTGKTL IARALACAAS KAGQKVSFYM RKGADVLSKW VGEAERQLKL LFEEAQRNQP SIIFFDEIDG LAPVRSSKQE
0501: QIHNSIVSTL LALMDGLDSR GQVVLIGATN RVDAIDGALR RPGRFDREFN FSLPGCEARA EILDIHTRKW KHPPTRELKE ELAATCVGYC GADLKALCTE
0601: AAIRAFREKY PQVYTSDDKY AIDVGLVNVE KSHFVEAMSA ITPAAHRGSV VQSRPLSPVV LPCLHRHLLE SMSLISDIFP SSATSSELTK LSILTFGSAI
0701: PLVYRPRLLL LGGEGVGLDH LGPAILHELE KFPIHSLGLP SLLSDPGAKT PEEALVHIFS EARRTTPSIL YIPMFNNWWE NAHEQLRAVF LTLLEELPSN
0801: LPILLLATSY GELSDMEEQS VFDNRSVYTV DKPSSEDRSL FFDRLIEAAL SVISGLNGKP DGPQPLPELP KVPKEPTGPK PAEVKAKVEA EQHALRRLRM
0901: CLRDVCNRIL YDKRFSAFHF PVTDEDAPNY RSIIQIPMDT ATLLQRVDTG QYLTCTPFLQ DVDLIVRNAK AYNGDDYAGA RIVSRAYELR DVVHGMLSQM
1001: DPALLTYCDK IAAEGGPSLI PDDLSGSILG LAPVVQMGTV TRTSARLRNV QPEVNLDRDY EGLKKPKKTT DAVSIDSAAD KSQNQDSGQE MPSPDAANPQ
1101: SAAPSPTDGD REDQSEPPSK EASAEDMSGD SCKGPAAKSD KEISSRTESV KGVFMERTDN YSIPQMERLY TRIMKGVLET LDKGLRDDDN NPKHSILRFL
1201: SEFAQHQANF
0101: SSGAEDEDMM SPAYRTLRRR VHKNFSTSKS RKDMDAELAP RREGLRPRRS TTIANKRLKT ESGADQDTSE EKDGQDETEN GNELDDADDG ENEVEAEDEG
0201: NGEDEGDGED EGEEDGDDDE EGDEEQEGRK RYDLRNRAEV RRMPTGEINK QQQPRSPRRV LHQGMGTRVG RDGRRGGSRP HKRHRFTRTD DSDDSLLVDE
0301: LDQGPAIPWA RGGNRSGAPW LFGGLDTYGS SSLGLNVGAS GWGHQSDGLA ALTSGVQTAG PSSKGGADIQ PLQINEDINF DDIGGLSEYI NDLKEMVFFP
0401: LLYPEFFASY SITPPRGVLL CGPPGTGKTL IARALACAAS KAGQKVSFYM RKGADVLSKW VGEAERQLKL LFEEAQRNQP SIIFFDEIDG LAPVRSSKQE
0501: QIHNSIVSTL LALMDGLDSR GQVVLIGATN RVDAIDGALR RPGRFDREFN FSLPGCEARA EILDIHTRKW KHPPTRELKE ELAATCVGYC GADLKALCTE
0601: AAIRAFREKY PQVYTSDDKY AIDVGLVNVE KSHFVEAMSA ITPAAHRGSV VQSRPLSPVV LPCLHRHLLE SMSLISDIFP SSATSSELTK LSILTFGSAI
0701: PLVYRPRLLL LGGEGVGLDH LGPAILHELE KFPIHSLGLP SLLSDPGAKT PEEALVHIFS EARRTTPSIL YIPMFNNWWE NAHEQLRAVF LTLLEELPSN
0801: LPILLLATSY GELSDMEEQS VFDNRSVYTV DKPSSEDRSL FFDRLIEAAL SVISGLNGKP DGPQPLPELP KVPKEPTGPK PAEVKAKVEA EQHALRRLRM
0901: CLRDVCNRIL YDKRFSAFHF PVTDEDAPNY RSIIQIPMDT ATLLQRVDTG QYLTCTPFLQ DVDLIVRNAK AYNGDDYAGA RIVSRAYELR DVVHGMLSQM
1001: DPALLTYCDK IAAEGGPSLI PDDLSGSILG LAPVVQMGTV TRTSARLRNV QPEVNLDRDY EGLKKPKKTT DAVSIDSAAD KSQNQDSGQE MPSPDAANPQ
1101: SAAPSPTDGD REDQSEPPSK EASAEDMSGD SCKGPAAKSD KEISSRTESV KGVFMERTDN YSIPQMERLY TRIMKGVLET LDKGLRDDDN NPKHSILRFL
1201: SEFAQHQANF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.