Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000808.1-P | Field mustard | cytosol | 90.03 | 93.56 |
| CDX90880 | Canola | plastid | 92.32 | 93.45 |
| CDY21320 | Canola | plastid | 89.89 | 93.42 |
| Bra029529.1-P | Field mustard | plastid | 92.45 | 93.21 |
| CDY16637 | Canola | plastid | 91.78 | 92.28 |
| CDX86132 | Canola | plastid | 90.97 | 91.46 |
| CDY39223 | Canola | cytosol, mitochondrion | 13.75 | 89.47 |
| VIT_19s0014g02750.t01 | Wine grape | cytosol | 79.11 | 79.43 |
| KRH50033 | Soybean | endoplasmic reticulum, nucleus | 77.9 | 77.48 |
| KRH20460 | Soybean | endoplasmic reticulum | 77.22 | 77.22 |
| EER93779 | Sorghum | cytosol | 71.56 | 71.47 |
| PGSC0003DMT400076472 | Potato | cytosol | 75.88 | 71.27 |
| Zm00001d038808_P001 | Maize | cytosol | 71.16 | 71.26 |
| Os05t0519400-01 | Rice | plasma membrane | 71.29 | 71.2 |
| TraesCS1B01G352200.2 | Wheat | cytosol, mitochondrion | 70.22 | 70.12 |
| TraesCS1D01G341900.2 | Wheat | cytosol | 70.35 | 70.07 |
| TraesCS1A01G339900.1 | Wheat | unclear | 70.35 | 69.88 |
| Zm00001d051286_P013 | Maize | cytosol | 70.22 | 68.55 |
| GSMUA_Achr6P26250_001 | Banana | cytosol | 4.18 | 67.39 |
| HORVU1Hr1G076180.22 | Barley | cytosol | 70.35 | 65.66 |
| CDY09518 | Canola | cytosol | 39.22 | 63.54 |
| PGSC0003DMT400076471 | Potato | cytosol | 15.77 | 60.31 |
| KRH24495 | Soybean | cytosol | 16.44 | 52.14 |
| Zm00001d000156_P001 | Maize | cytosol | 17.39 | 30.28 |
| AT1G05910.1 | Thale cress | nucleus | 19.0 | 11.65 |
| AT3G15120.2 | Thale cress | cytosol | 16.98 | 6.42 |
| Solyc07g062770.2.1 | Tomato | nucleus | 6.33 | 6.39 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:2.40.40.20 | Gene3D:3.10.330.10 | Gene3D:3.40.50.300 | MapMan:50.3.6 | EntrezGene:825830 |
| UniProt:A0A178UTB9 | InterPro:AAA+_ATPase | ProteinID:AAD17345.1 | ProteinID:AEE82440.1 | ArrayExpress:AT4G04910 | EnsemblPlantsGene:AT4G04910 |
| RefSeq:AT4G04910 | TAIR:AT4G04910 | RefSeq:AT4G04910-TAIR-G | EnsemblPlants:AT4G04910.1 | TAIR:AT4G04910.1 | InterPro:ATPase_AAA_CS |
| InterPro:ATPase_AAA_core | EMBL:AY102111 | InterPro:Asp_de-COase-like_dom_sf | Unigene:At.33942 | ProteinID:CAB81033.1 | InterPro:CDC48_domain_2-like_sf |
| InterPro:CDC4_N-term_subdom | InterPro:Cdc48_dom2 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005773 | GO:GO:0005794 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009506 |
| GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 | GO:GO:0016787 | GO:GO:0046872 | RefSeq:NP_192400.2 |
| Symbol:NSF | ProteinID:OAO96760.1 | InterPro:P-loop_NTPase | PFAM:PF00004 | PFAM:PF02933 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00674 | PANTHER:PTHR23078 |
| PANTHER:PTHR23078:SF11 | UniProt:Q9M0Y8 | SMART:SM00382 | SMART:SM01073 | SUPFAM:SSF50692 | SUPFAM:SSF52540 |
| SUPFAM:SSF54585 | UniParc:UPI0000130546 | SEG:seg | : | : | : |
Description
NSFNSF [Source:UniProtKB/TrEMBL;Acc:A0A178UTB9]
Coordinates
chr4:-:2489364..2495863
Molecular Weight (calculated)
81492.0 Da
IEP (calculated)
5.984
GRAVY (calculated)
-0.120
Length
742 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGRYGSQVM TMTVTNTPSA DLAFTNLAYC SSSDLRQFSV PGSDLFLANV ADSFILSLCG HGSIRDGNIA LNAIQRRHAR VSTGDMVSVS RFVPPENFDL
101: AMLTLELEFV KKGTKSEQVD AALLSTQLKR KYTNQVLTVG QKATFEYHGT NYILTVNRAD VEGQDHTNGI ERGLLSKDTY IVFEASNASG IKIVNQREAA
201: SSNIFKHKEF NLESLGIGGL GAEFADIFRR AFASRVFPPH VTSRLGIKHV KGMLLFGPPG TGKTLMARQI GKMLNGKDPK IVNGPEVLSK FVGETEKNVR
301: DLFADAEQDQ RTLGDASELH VIIFDEIDAI CKSRGSTRDG TGVHDSIVNQ LLTKIDGVEA LNNVLLIGMT NRKDLLDEAL LRPGRLEVQV EISLPDEAGR
401: LQILQIHTNK MKENSFLGTD INLQELAART KNYSGAELEG VVKSATSYAL NRQLSMDDLT KPVEEENIKI TMEDFLHAIY EVQPAFGAST DDLERCRLNG
501: MVDCGHRHNH IYKRAMLLVE QVKVSTRSPL VTCLLEGPSG SGKTALAATI GIDSDFPYVK IVSAETMIGL SESTKCAHIV KVFEDAYKSP MSIIILDDIE
601: RLLEFIAIGP RFSNIISQTL MVLLKRLPPK GKKLLVFGTT SEVTFLESVG ISDCFSVTHS VPTLQKEDAK KVLNQLNLFS EDDVDSAAEA LNDMPIKKIY
701: MLIEMAAQGE NGGSAEAIYA GREKININHF YDCLGDFIRF TG
101: AMLTLELEFV KKGTKSEQVD AALLSTQLKR KYTNQVLTVG QKATFEYHGT NYILTVNRAD VEGQDHTNGI ERGLLSKDTY IVFEASNASG IKIVNQREAA
201: SSNIFKHKEF NLESLGIGGL GAEFADIFRR AFASRVFPPH VTSRLGIKHV KGMLLFGPPG TGKTLMARQI GKMLNGKDPK IVNGPEVLSK FVGETEKNVR
301: DLFADAEQDQ RTLGDASELH VIIFDEIDAI CKSRGSTRDG TGVHDSIVNQ LLTKIDGVEA LNNVLLIGMT NRKDLLDEAL LRPGRLEVQV EISLPDEAGR
401: LQILQIHTNK MKENSFLGTD INLQELAART KNYSGAELEG VVKSATSYAL NRQLSMDDLT KPVEEENIKI TMEDFLHAIY EVQPAFGAST DDLERCRLNG
501: MVDCGHRHNH IYKRAMLLVE QVKVSTRSPL VTCLLEGPSG SGKTALAATI GIDSDFPYVK IVSAETMIGL SESTKCAHIV KVFEDAYKSP MSIIILDDIE
601: RLLEFIAIGP RFSNIISQTL MVLLKRLPPK GKKLLVFGTT SEVTFLESVG ISDCFSVTHS VPTLQKEDAK KVLNQLNLFS EDDVDSAAEA LNDMPIKKIY
701: MLIEMAAQGE NGGSAEAIYA GREKININHF YDCLGDFIRF TG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.