Factsheet for Bra000808.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 3
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90880	Canola	plastid	98.88	96.32
Bra029529.1-P	Field mustard	plastid	97.48	94.57
AT4G04910.1	Thale cress	plastid	93.56	90.03
VIT_19s0014g02750.t01	Wine grape	cytosol	80.53	77.81
KRH50033	Soybean	endoplasmic reticulum, nucleus	80.11	76.68
KRH20460	Soybean	endoplasmic reticulum	79.27	76.28
Bra033538.1-P	Field mustard	cytosol	67.93	74.05
GSMUA_Achr6P26250_001	Banana	cytosol	4.62	71.74
EER93779	Sorghum	cytosol	74.09	71.2
Os05t0519400-01	Rice	plasma membrane	73.95	71.06
Zm00001d038808_P001	Maize	cytosol	73.53	70.85
TraesCS1B01G352200.2	Wheat	cytosol, mitochondrion	73.11	70.26
TraesCS1D01G341900.2	Wheat	cytosol	73.25	70.2
PGSC0003DMT400076472	Potato	cytosol	77.59	70.13
TraesCS1A01G339900.1	Wheat	unclear	73.25	70.01
Zm00001d051286_P013	Maize	cytosol	72.55	68.16
HORVU1Hr1G076180.22	Barley	cytosol	73.25	65.79
PGSC0003DMT400076471	Potato	cytosol	14.85	54.64
KRH24495	Soybean	cytosol	17.65	53.85
Zm00001d000156_P001	Maize	cytosol	18.49	30.99
Bra032449.1-P	Field mustard	nucleus	20.17	11.84
Bra015464.1-P	Field mustard	nucleus	19.75	11.68
Bra001584.1-P	Field mustard	nucleus	17.23	6.5
Solyc07g062770.2.1	Tomato	nucleus	6.58	6.39

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.10.330.10	Gene3D:3.40.50.300	MapMan:50.3.6	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS
InterPro:ATPase_AAA_core	InterPro:Asp_de-COase-like_dom_sf	EnsemblPlantsGene:Bra000808	EnsemblPlants:Bra000808.1	EnsemblPlants:Bra000808.1-P	InterPro:CDC48_domain_2-like_sf
InterPro:CDC4_N-term_subdom	InterPro:Cdc48_dom2	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
UniProt:M4C9C9	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF02933	ScanProsite:PS00674	PANTHER:PTHR23078
PANTHER:PTHR23078:SF11	SMART:SM00382	SMART:SM01073	SUPFAM:SSF50692	SUPFAM:SSF52540	SUPFAM:SSF54585
UniParc:UPI00025404B5	SEG:seg	:	:	:	:

Description

AT4G04910 (E=0.0) NSF | NSF (N-ethylmaleimide sensitive factor); ATP binding / binding / nucleoside-triphosphatase/ nucleotide binding

Coordinates

chrA03:-:13278783..13284093

Molecular Weight (calculated)

78720.8 Da

IEP (calculated)

6.089

GRAVY (calculated)

-0.148

Length

714 amino acids

Sequence
(BLAST)

001: MAGGYGSQVM TMTVTNTPSA DLAFTNLAYC SSSDLRHIRD GSIALNAIQR RHARVSTGDM VSVSRFVPPE NFELAMLTLE LEFVKKGTKS EQVDAALLST
101: QLKRKYINQV LTVGQKATFE YHGTNYILTV NRADVEGQNQ SNGIERGMLS QDTYVVFEAS NASGIKIVNQ REAASSNIFK HKEFNLESLG IGGLGAEFAD
201: IFRRAFASRV FPPHVTSRLG IKHVKGMLLF GPPGTGKTLM ARQIGKMLNG KDPKIVNGPE VLSKFVGETE KNVRDLFADA EQDQRTLGDA SELHVIIFDE
301: IDAICKSRGS TRDGTGVHDS IVNQLLTKID GVEALNNVLL IGMTNRKDLL DEALLRPGRL EVQVEISLPD EAGRLQILQI HTNKMKENSF LGHDINLQEL
401: AARTKNYSGA ELEGVVKSAT SYALNRQLSM DDLTKPVEEE NIKITMEDFL HAIHEVQPAF GASTDDLERC RLNGMVDSGD RHNHIYKRAM LLVEQVKVST
501: RSPLVTCLLE GPSGSGKTAL AATVGIDSDF PYVKIVSAET MIGLHESTKC AHIVKVFEDA YKSPMSIIIL DDIERLLEYV AIGPRFSNII SQTLMVLLKR
601: LPPKGKKLLV FGTTSQLTFL DSVGICEAFS ITYSVPTLRT EDAKKVLKQL NVFSEDDVEA AAEALDDMPI KKLYMLIEMA AQGEYGGSAE AIYDGREKIK
701: LTHFFDCLQD VVRF

Best Arabidopsis Sequence Match ( AT4G04910.1 )
(BLAST)

001: MAGRYGSQVM TMTVTNTPSA DLAFTNLAYC SSSDLRQFSV PGSDLFLANV ADSFILSLCG HGSIRDGNIA LNAIQRRHAR VSTGDMVSVS RFVPPENFDL
101: AMLTLELEFV KKGTKSEQVD AALLSTQLKR KYTNQVLTVG QKATFEYHGT NYILTVNRAD VEGQDHTNGI ERGLLSKDTY IVFEASNASG IKIVNQREAA
201: SSNIFKHKEF NLESLGIGGL GAEFADIFRR AFASRVFPPH VTSRLGIKHV KGMLLFGPPG TGKTLMARQI GKMLNGKDPK IVNGPEVLSK FVGETEKNVR
301: DLFADAEQDQ RTLGDASELH VIIFDEIDAI CKSRGSTRDG TGVHDSIVNQ LLTKIDGVEA LNNVLLIGMT NRKDLLDEAL LRPGRLEVQV EISLPDEAGR
401: LQILQIHTNK MKENSFLGTD INLQELAART KNYSGAELEG VVKSATSYAL NRQLSMDDLT KPVEEENIKI TMEDFLHAIY EVQPAFGAST DDLERCRLNG
501: MVDCGHRHNH IYKRAMLLVE QVKVSTRSPL VTCLLEGPSG SGKTALAATI GIDSDFPYVK IVSAETMIGL SESTKCAHIV KVFEDAYKSP MSIIILDDIE
601: RLLEFIAIGP RFSNIISQTL MVLLKRLPPK GKKLLVFGTT SEVTFLESVG ISDCFSVTHS VPTLQKEDAK KVLNQLNLFS EDDVDSAAEA LNDMPIKKIY
701: MLIEMAAQGE NGGSAEAIYA GREKININHF YDCLGDFIRF TG

Arabidopsis Description

NSFNSF [Source:UniProtKB/TrEMBL;Acc:A0A178UTB9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.