Factsheet for HORVU1Hr1G076180.22

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G339900.1	Wheat	unclear	91.57	97.46
TraesCS1D01G341900.2	Wheat	cytosol	91.32	97.45
TraesCS1B01G352200.2	Wheat	cytosol, mitochondrion	91.07	97.44
Os05t0519400-01	Rice	plasma membrane	83.65	89.5
EER93779	Sorghum	cytosol	82.64	88.43
Zm00001d038808_P001	Maize	cytosol	82.39	88.39
Zm00001d051286_P013	Maize	cytosol	81.01	84.74
CDY39223	Canola	cytosol, mitochondrion	11.7	81.58
Solyc01g104920.2.1	Tomato	plastid	65.53	75.29
GSMUA_Achr9P05850_001	Banana	cytosol	70.31	75.24
GSMUA_Achr8P27650_001	Banana	cytosol	70.57	75.1
CDY21320	Canola	plastid	66.04	73.53
VIT_19s0014g02750.t01	Wine grape	cytosol	68.18	73.34
Bra000808.1-P	Field mustard	cytosol	65.79	73.25
KRH50033	Soybean	endoplasmic reticulum, nucleus	67.3	71.72
KRH20460	Soybean	endoplasmic reticulum	66.92	71.7
CDX90880	Canola	plastid	66.04	71.62
Bra029529.1-P	Field mustard	plastid	65.91	71.2
CDX86132	Canola	plastid	65.53	70.6
CDY16637	Canola	plastid	65.53	70.6
AT4G04910.1	Thale cress	plastid	65.66	70.35
PGSC0003DMT400076472	Potato	cytosol	65.79	66.2
Bra033538.1-P	Field mustard	cytosol	53.96	65.5
CDY34435	Canola	cytosol	57.99	62.98
CDY32219	Canola	cytosol	57.61	62.06
CDY09518	Canola	cytosol	32.08	55.68
KRH24495	Soybean	cytosol	15.97	54.27
Solyc01g104930.1.1	Tomato	cytosol	12.45	54.1
PGSC0003DMT400076471	Potato	cytosol	12.45	51.03
Zm00001d000156_P001	Maize	cytosol	18.49	34.51
HORVU5Hr1G078780.1	Barley	nucleus	19.12	12.55
HORVU3Hr1G061240.1	Barley	cytosol	17.36	7.5

Protein Annotations

Gene3D:1.10.8.60	Gene3D:2.40.40.20	Gene3D:3.10.330.10	Gene3D:3.40.50.300	MapMan:50.3.6	UniProt:A0A287GAU2
InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	InterPro:Asp_de-COase-like_dom_sf	InterPro:CDC48_domain_2-like_sf	InterPro:CDC4_N-term_subdom
InterPro:Cdc48_dom2	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005794	GO:GO:0005886
GO:GO:0009506	GO:GO:0016020	EnsemblPlantsGene:HORVU1Hr1G076180	EnsemblPlants:HORVU1Hr1G076180.22	InterPro:P-loop_NTPase	PFAM:PF00004
PFAM:PF02359	PFAM:PF02933	ScanProsite:PS00674	PANTHER:PTHR23078	PANTHER:PTHR23078:SF11	SMART:SM00382
SMART:SM01073	SUPFAM:SSF50692	SUPFAM:SSF52540	SUPFAM:SSF54585	UniParc:UPI000B4653F7	SEG:seg

Description

No Description!

Coordinates

chrchr1H:-:513250153..513258444

Molecular Weight (calculated)

86293.6 Da

IEP (calculated)

6.431

GRAVY (calculated)

-0.111

Length

795 amino acids

Sequence
(BLAST)

001: PRPVSACAQR RVASHRTASH HTLPRSPPPP PPRAPDPSPP HPRDLSPAMA GRGYQGRGAG GSAGAGAGVP MAVVSTPSQE LALTNCAYVS PADVRRFPTA
101: LALVGDGLVF ALRAHDAVAT GSIALNAIQR RQVKVSAGDS ITVSSFAPPD DFKLALLTLE LEYTKARSNR VEDLDAVLLA QQLRKRFLDQ VMTSGQRVPF
201: EFYGTNYIFT VNQALLEGQE SSTPLDRGFL SSDTYIIFEA APNSGIKVIN QKEAASSKLF KDKEFNLEKL GIGGLSSEFT DIFRRAFASR VFPPHVVSKL
301: GIKHVKGMLL YGPPGTGKTL MARQIGKLLN GKDPKIVNGP EVLSKFVGET EKNVRDLFLD AENDQKAQGD HSDLHVIIFD EIDAICKSRG SSRDGTGVHD
401: SIVNQLLTKI DGVEALNNVL LIGMTNRKDL LDEALLRPGR LEVHIEINLP DENGRLQILQ IHTSKMRESS FLSPDVNLQE LAARTKNYSG AELEGVVKSA
501: VSFALNRQIS MDDLTKPLDE ESIKVTMDDF VNGLHEITPA FGASTDDLER CRLHGIVDCG KAHQHIFQRA MLLVEQVKVS KGSPLVTCLL TGSAGSGKSA
601: LAATVGIDSD FAYVKIISAE TMIGFSESSK CAQICKVFED AYKSQFSIII LDDIERLLEF VAIGPRFSNL ISQTLMVLLK RVPPKGKNLL VIGTTSETTF
701: LDSIGMSGVF SVTYEVPKLT KEDAAKVLRH LNVFDEGDIE TAAEALDDMP IKKLYTLVEM AAQGPQGGSA EAIYAGEEKI DLNHFFSILS DIIRY

Best Arabidopsis Sequence Match ( AT4G04910.1 )
(BLAST)

001: MAGRYGSQVM TMTVTNTPSA DLAFTNLAYC SSSDLRQFSV PGSDLFLANV ADSFILSLCG HGSIRDGNIA LNAIQRRHAR VSTGDMVSVS RFVPPENFDL
101: AMLTLELEFV KKGTKSEQVD AALLSTQLKR KYTNQVLTVG QKATFEYHGT NYILTVNRAD VEGQDHTNGI ERGLLSKDTY IVFEASNASG IKIVNQREAA
201: SSNIFKHKEF NLESLGIGGL GAEFADIFRR AFASRVFPPH VTSRLGIKHV KGMLLFGPPG TGKTLMARQI GKMLNGKDPK IVNGPEVLSK FVGETEKNVR
301: DLFADAEQDQ RTLGDASELH VIIFDEIDAI CKSRGSTRDG TGVHDSIVNQ LLTKIDGVEA LNNVLLIGMT NRKDLLDEAL LRPGRLEVQV EISLPDEAGR
401: LQILQIHTNK MKENSFLGTD INLQELAART KNYSGAELEG VVKSATSYAL NRQLSMDDLT KPVEEENIKI TMEDFLHAIY EVQPAFGAST DDLERCRLNG
501: MVDCGHRHNH IYKRAMLLVE QVKVSTRSPL VTCLLEGPSG SGKTALAATI GIDSDFPYVK IVSAETMIGL SESTKCAHIV KVFEDAYKSP MSIIILDDIE
601: RLLEFIAIGP RFSNIISQTL MVLLKRLPPK GKKLLVFGTT SEVTFLESVG ISDCFSVTHS VPTLQKEDAK KVLNQLNLFS EDDVDSAAEA LNDMPIKKIY
701: MLIEMAAQGE NGGSAEAIYA GREKININHF YDCLGDFIRF TG

Arabidopsis Description

NSFNSF [Source:UniProtKB/TrEMBL;Acc:A0A178UTB9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.