Factsheet for Bra033538.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
endoplasmic reticulum 3
extracellular 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
EpiLoc:	endoplasmic reticulum
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32219	Canola	cytosol	99.24	88.08
Bra000808.1-P	Field mustard	cytosol	74.05	67.93
Bra029529.1-P	Field mustard	plastid	73.74	65.62
GSMUA_Achr6P26250_001	Banana	cytosol	4.43	63.04
VIT_19s0014g02750.t01	Wine grape	cytosol	70.38	62.38
KRH20460	Soybean	endoplasmic reticulum	69.77	61.59
KRH50033	Soybean	endoplasmic reticulum, nucleus	69.92	61.39
Zm00001d038808_P001	Maize	cytosol	65.8	58.16
EER93779	Sorghum	cytosol	65.95	58.14
TraesCS1B01G352200.2	Wheat	cytosol, mitochondrion	65.34	57.6
Os05t0519400-01	Rice	plasma membrane	65.34	57.6
TraesCS1D01G341900.2	Wheat	cytosol	65.34	57.45
TraesCS1A01G339900.1	Wheat	unclear	65.34	57.3
PGSC0003DMT400076472	Potato	cytosol	68.55	56.84
Zm00001d051286_P013	Maize	cytosol	65.5	56.45
HORVU1Hr1G076180.22	Barley	cytosol	65.5	53.96
KRH24495	Soybean	cytosol	16.64	46.58
PGSC0003DMT400076471	Potato	cytosol	9.47	31.96
Zm00001d000156_P001	Maize	cytosol	15.88	24.41
Bra015464.1-P	Field mustard	nucleus	20.0	10.85
Bra032449.1-P	Field mustard	nucleus	19.69	10.61
Solyc07g062770.2.1	Tomato	nucleus	7.18	6.39
Bra001584.1-P	Field mustard	nucleus	17.71	6.13

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.10.330.10	Gene3D:3.40.50.300	MapMan:50.3.6	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS
InterPro:ATPase_AAA_core	EnsemblPlantsGene:Bra033538	EnsemblPlants:Bra033538.1	EnsemblPlants:Bra033538.1-P	InterPro:CDC48_domain_2-like_sf	InterPro:Cdc48_dom2
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	UniProt:M4EXK1	InterPro:P-loop_NTPase
PFAM:PF00004	PFAM:PF02933	PRINTS:PR00830	ScanProsite:PS00674	PANTHER:PTHR23078	PANTHER:PTHR23078:SF11
SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF54585	UniParc:UPI00025448B4	:	:

Description

AT4G04910 (E=2e-273) NSF | NSF (N-ethylmaleimide sensitive factor); ATP binding / binding / nucleoside-triphosphatase/ nucleotide binding

Coordinates

chrA01:+:11263475..11267340

Molecular Weight (calculated)

73411.8 Da

IEP (calculated)

6.292

GRAVY (calculated)

-0.196

Length

655 amino acids

Sequence
(BLAST)

001: MVTITRFVPP EKFDLILLAL ELEFVKKGTK NEQVDAVVLS TQLKKKFMYQ VFTVGQRVTF EFHGTNYILT VNRAVIEADG SQTNGIERGM IFNDTYFVFE
101: ASNASGIKIM NQREAATRKI FKEKEFFNNL SLEIGGLNAV FVDLFRRAFS YRILPPYLRD RLGRKQVKGV LLYGPPGTGK TLMARQIGKM LNGKEPKIVN
201: GPEVLNKFVG ETEKNIRDLF ADAENDQRTH GDDSELHVII FDEIDAICKS RGSSSDGTGV HDSIVNQLLT KIDGVEALNN VLLIGMTNRK DMLDEALLRS
301: GRLEVHIEIG LPDEAGRVQI LHIHTKMLKE NSFLAPDVNL QELAAQTKNY SGAELEGVVK SATSYALFRH LNMEDLSNPV DEENIKITME DFRQGLREVM
401: PAFGASPKAL QNCRPKGFVD CGDRQNLIYK RIMFLVEQVS NETSPPVTCL LKGPSGSGKT ALAATIGIDS NFPYVKIVSA ETMAGLQEST KAARIAKVFE
501: DAYKSPLSIV ILDNIERLLE YSEIGPRFSN MILQTLLIYL NQLPKEGSKL LVLGTTSELT FLKAVGLRKA FSVTYDVPLL RTEDAKKVLK QLNVFSDDDM
601: EEASKALNDI PIKKLYFLIE MAAQRDGRSK ETIYTRKEKL DLAHFFDCLE EVTEN

Best Arabidopsis Sequence Match ( AT4G04910.1 )
(BLAST)

001: MAGRYGSQVM TMTVTNTPSA DLAFTNLAYC SSSDLRQFSV PGSDLFLANV ADSFILSLCG HGSIRDGNIA LNAIQRRHAR VSTGDMVSVS RFVPPENFDL
101: AMLTLELEFV KKGTKSEQVD AALLSTQLKR KYTNQVLTVG QKATFEYHGT NYILTVNRAD VEGQDHTNGI ERGLLSKDTY IVFEASNASG IKIVNQREAA
201: SSNIFKHKEF NLESLGIGGL GAEFADIFRR AFASRVFPPH VTSRLGIKHV KGMLLFGPPG TGKTLMARQI GKMLNGKDPK IVNGPEVLSK FVGETEKNVR
301: DLFADAEQDQ RTLGDASELH VIIFDEIDAI CKSRGSTRDG TGVHDSIVNQ LLTKIDGVEA LNNVLLIGMT NRKDLLDEAL LRPGRLEVQV EISLPDEAGR
401: LQILQIHTNK MKENSFLGTD INLQELAART KNYSGAELEG VVKSATSYAL NRQLSMDDLT KPVEEENIKI TMEDFLHAIY EVQPAFGAST DDLERCRLNG
501: MVDCGHRHNH IYKRAMLLVE QVKVSTRSPL VTCLLEGPSG SGKTALAATI GIDSDFPYVK IVSAETMIGL SESTKCAHIV KVFEDAYKSP MSIIILDDIE
601: RLLEFIAIGP RFSNIISQTL MVLLKRLPPK GKKLLVFGTT SEVTFLESVG ISDCFSVTHS VPTLQKEDAK KVLNQLNLFS EDDVDSAAEA LNDMPIKKIY
701: MLIEMAAQGE NGGSAEAIYA GREKININHF YDCLGDFIRF TG

Arabidopsis Description

NSFNSF [Source:UniProtKB/TrEMBL;Acc:A0A178UTB9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.