Factsheet for Zm00001d038808_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93779	Sorghum	cytosol	96.9	96.64
Zm00001d051286_P013	Maize	cytosol	94.87	92.5
Os05t0519400-01	Rice	plasma membrane	90.42	90.17
TraesCS1B01G352200.2	Wheat	cytosol, mitochondrion	88.12	87.89
TraesCS1D01G341900.2	Wheat	cytosol	87.99	87.52
TraesCS1A01G339900.1	Wheat	unclear	88.12	87.42
CDY39223	Canola	cytosol, mitochondrion	12.82	83.33
HORVU1Hr1G076180.22	Barley	cytosol	88.39	82.39
Solyc01g104920.2.1	Tomato	plastid	71.93	77.02
GSMUA_Achr8P27650_001	Banana	cytosol	77.06	76.44
GSMUA_Achr9P05850_001	Banana	cytosol	76.11	75.91
VIT_19s0014g02750.t01	Wine grape	cytosol	75.03	75.24
CDY21320	Canola	plastid	70.99	73.67
Bra000808.1-P	Field mustard	cytosol	70.85	73.53
KRH50033	Soybean	endoplasmic reticulum, nucleus	73.82	73.32
KRH20460	Soybean	endoplasmic reticulum	72.47	72.37
Bra029529.1-P	Field mustard	plastid	71.66	72.15
CDX90880	Canola	plastid	71.12	71.9
CDX86132	Canola	plastid	71.39	71.68
CDY16637	Canola	plastid	71.12	71.41
AT4G04910.1	Thale cress	plastid	71.26	71.16
PGSC0003DMT400076472	Potato	cytosol	72.47	67.97
Bra033538.1-P	Field mustard	cytosol	58.16	65.8
CDY34435	Canola	cytosol	63.02	63.8
CDY32219	Canola	cytosol	62.21	62.47
CDY09518	Canola	cytosol	35.22	56.99
Solyc01g104930.1.1	Tomato	cytosol	13.36	54.1
KRH24495	Soybean	cytosol	17.0	53.85
PGSC0003DMT400076471	Potato	cytosol	13.63	52.06
Zm00001d000156_P001	Maize	cytosol	21.32	37.09
Zm00001d016467_P001	Maize	cytosol	5.53	36.28
Zm00001d013148_P001	Maize	cytosol	6.61	30.06
Zm00001d021145_P003	Maize	plasma membrane	20.78	12.92
Zm00001d043928_P001	Maize	cytosol, nucleus, plastid	14.44	11.66
Zm00001d043927_P001	Maize	plastid	17.81	7.21

Protein Annotations

Gene3D:1.10.8.60	EntrezGene:100382060	Gene3D:2.40.40.20	Gene3D:3.10.330.10	Gene3D:3.40.50.300	MapMan:50.3.6
InterPro:AAA+_ATPase	ProteinID:AQK87874.1	ProteinID:AQK87875.1	ProteinID:AQK87877.1	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core
InterPro:Asp_de-COase-like_dom_sf	EMBL:BT063025	UniProt:C0P406	InterPro:CDC48_domain_2-like_sf	InterPro:CDC4_N-term_subdom	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF02359
ScanProsite:PS00674	PANTHER:PTHR23078	PANTHER:PTHR23078:SF11	SMART:SM00382	SMART:SM01073	SUPFAM:SSF50692
SUPFAM:SSF52540	SUPFAM:SSF54585	UniParc:UPI000194908C	EnsemblPlantsGene:Zm00001d038808	EnsemblPlants:Zm00001d038808_P001	EnsemblPlants:Zm00001d038808_T001
SEG:seg	:	:	:	:	:

Description

Vesicle-fusing ATPase

Coordinates

chr6:+:164864362..164873051

Molecular Weight (calculated)

81322.8 Da

IEP (calculated)

5.923

GRAVY (calculated)

-0.103

Length

741 amino acids

Sequence
(BLAST)

001: MAGRYYQGQG GGGGTSMEVV STPNQELALT NCAYVCPADL RRFPNALAVV ADSWVFTLRE HNAVASGRIA LNAIQRRQAK VSAGDSVTVS SFVPPDDFKL
101: ALLTLELEYA KARANRNDEL DAVVLAQQLR KRFLDQVMTL GQRVPFEFHG TNYVFTVNQA LLEGQESSTP LDRGFLSSDT YIIFEAAPNS GIKVINQKEA
201: ASSKLFKHKE FNLEKLGIGG LSAEFTDIFR RAFASRVFPP QVVSKLGIKH VKGILLYGPP GTGKTLMARQ IGKLLNGKDP KIVNGPEVLS KFVGETEKNV
301: RDLFADAENE QRTRGDQSDL HVIIFDEIDA ICKSRGSTRD GTGVHDSIVN QLLTKIDGVE ALNNVLLIGM TNRKDLLDEA LLRPGRLEVH IEINLPDENG
401: RFQILQIHTN KMKENSFLSP DINLLELAAR TKNYSGAELE GVVKSAVSYA LNRQITMDDL TKPLDEESIK VTMDDFVNAL HEITPAFGAS TDDLERCRLR
501: GIVDCGKAHK HIYQRAMLLV EQVKVSKGSP LVTCLLEGPA GSGKTAMAAS VGIDSDFAYV KIISAETMIG FSESSKCAQI CKVFEDAYKS QFSIIVLDDI
601: ERLLEYVAIG PRFSNLISQT LLVLLKRVPP KGKNLLVIGT TSEVGFLESV GMCDVFSVTY HVPKLKKEDA KKVLHHLDVF DDGDLDAAAE ALDDMPIKKL
701: YTLVEMAAQG PTGGSAEAIY AGEDKIDINH FFSILSDIIR Y

Best Arabidopsis Sequence Match ( AT4G04910.1 )
(BLAST)

001: MAGRYGSQVM TMTVTNTPSA DLAFTNLAYC SSSDLRQFSV PGSDLFLANV ADSFILSLCG HGSIRDGNIA LNAIQRRHAR VSTGDMVSVS RFVPPENFDL
101: AMLTLELEFV KKGTKSEQVD AALLSTQLKR KYTNQVLTVG QKATFEYHGT NYILTVNRAD VEGQDHTNGI ERGLLSKDTY IVFEASNASG IKIVNQREAA
201: SSNIFKHKEF NLESLGIGGL GAEFADIFRR AFASRVFPPH VTSRLGIKHV KGMLLFGPPG TGKTLMARQI GKMLNGKDPK IVNGPEVLSK FVGETEKNVR
301: DLFADAEQDQ RTLGDASELH VIIFDEIDAI CKSRGSTRDG TGVHDSIVNQ LLTKIDGVEA LNNVLLIGMT NRKDLLDEAL LRPGRLEVQV EISLPDEAGR
401: LQILQIHTNK MKENSFLGTD INLQELAART KNYSGAELEG VVKSATSYAL NRQLSMDDLT KPVEEENIKI TMEDFLHAIY EVQPAFGAST DDLERCRLNG
501: MVDCGHRHNH IYKRAMLLVE QVKVSTRSPL VTCLLEGPSG SGKTALAATI GIDSDFPYVK IVSAETMIGL SESTKCAHIV KVFEDAYKSP MSIIILDDIE
601: RLLEFIAIGP RFSNIISQTL MVLLKRLPPK GKKLLVFGTT SEVTFLESVG ISDCFSVTHS VPTLQKEDAK KVLNQLNLFS EDDVDSAAEA LNDMPIKKIY
701: MLIEMAAQGE NGGSAEAIYA GREKININHF YDCLGDFIRF TG

Arabidopsis Description

NSFNSF [Source:UniProtKB/TrEMBL;Acc:A0A178UTB9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.