CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39223	Canola	cytosol, mitochondrion	22.71	91.23
CDY21320	Canola	plastid	63.76	40.9
CDY16637	Canola	plastid	64.41	39.97
CDX90880	Canola	plastid	63.76	39.84
CDX86132	Canola	plastid	63.97	39.7
AT4G04910.1	Thale cress	plastid	63.54	39.22
KRH20460	Soybean	endoplasmic reticulum	59.83	36.93
KRH50033	Soybean	endoplasmic reticulum, nucleus	59.83	36.73
VIT_19s0014g02750.t01	Wine grape	cytosol	58.95	36.54
Zm00001d038808_P001	Maize	cytosol	56.99	35.22
Os05t0519400-01	Rice	plasma membrane	56.99	35.13
EER93779	Sorghum	cytosol	56.99	35.13
PGSC0003DMT400076472	Potato	cytosol	59.83	34.68
CDY34435	Canola	cytosol	55.02	34.43
Zm00001d051286_P013	Maize	cytosol	56.99	34.34
TraesCS1B01G352200.2	Wheat	cytosol, mitochondrion	55.68	34.32
TraesCS1D01G341900.2	Wheat	cytosol	55.68	34.23
TraesCS1A01G339900.1	Wheat	unclear	55.68	34.14
CDY32219	Canola	cytosol	52.62	32.66
HORVU1Hr1G076180.22	Barley	cytosol	55.68	32.08
KRH24495	Soybean	cytosol	14.85	29.06
PGSC0003DMT400076471	Potato	cytosol	9.61	22.68
Zm00001d000156_P001	Maize	cytosol	15.72	16.9
CDX96221	Canola	cytosol	3.28	12.2
CDY10163	Canola	nucleus	24.02	9.25
CDY47705	Canola	nucleus	23.8	9.18
CDY10003	Canola	nucleus	24.02	9.18
CDY06186	Canola	nucleus	24.02	9.16
GSMUA_Achr6P26250_001	Banana	cytosol	0.66	6.52
CDX75809	Canola	nucleus	24.02	5.97
CDX82447	Canola	nucleus	23.36	5.83
Solyc07g062770.2.1	Tomato	nucleus	8.08	5.03

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:50.3.6	GO:A0A078FC25	UniProt:A0A078FC25	InterPro:AAA+_ATPase
InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	EnsemblPlants:CDY09518	ProteinID:CDY09518	ProteinID:CDY09518.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	EnsemblPlantsGene:GSBRNA2T00031093001	InterPro:P-loop_NTPase	PFAM:PF00004
ScanProsite:PS00674	PANTHER:PTHR23078	PANTHER:PTHR23078:SF11	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI0004EDF738
SEG:seg	:	:	:	:	:

Description

BnaC05g24010DBnaC05g24010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FC25]

Coordinates

chrLK031997:-:12754..15991

Molecular Weight (calculated)

50745.0 Da

IEP (calculated)

6.701

GRAVY (calculated)

-0.300

Length

458 amino acids

Sequence
(BLAST)

001: MLKKAPKCES QNEPFGDVAV GEWEPCNFLD FFHATRESPA HRQTLASFSL AQTAISSPSS FPLPSVYRLK SVQSNLHQRG IGGLGAEFAD IFRRAFASRV
101: FPLHVTSRLG IKNVKGMLLF GPPGTGKTLM ARQIGKMLNG KDPKIVNGPE VLSKFVGETE KNVRDLFADA EQDQRTLGDA SELHVIIFDE IDAICKSRGS
201: TRDGTGVHDS IVNQLLTKID GVEALNNVLL IGMTNRKDLL DEALLRPGRL EVQVEISLPD EAGRFQILQI HTNKMKEISF LGHDINLQEL AARTKNYSGA
301: ELEGVVKSAT SYALNRQLSM DDLTKPVEEK NIKITMEDFL HAIHEVQPAF GASTDDLDVA AMVNASEVKH EPAQCLFSLK LPNCKSMPLD TRQRDLPPQL
401: CFEDNTARTV PLPELGRPYA AELQARCLQP SPLQSLLWSH HDKESCGKRF SILLRKDL

Best Arabidopsis Sequence Match ( AT4G04910.1 )
(BLAST)

001: MAGRYGSQVM TMTVTNTPSA DLAFTNLAYC SSSDLRQFSV PGSDLFLANV ADSFILSLCG HGSIRDGNIA LNAIQRRHAR VSTGDMVSVS RFVPPENFDL
101: AMLTLELEFV KKGTKSEQVD AALLSTQLKR KYTNQVLTVG QKATFEYHGT NYILTVNRAD VEGQDHTNGI ERGLLSKDTY IVFEASNASG IKIVNQREAA
201: SSNIFKHKEF NLESLGIGGL GAEFADIFRR AFASRVFPPH VTSRLGIKHV KGMLLFGPPG TGKTLMARQI GKMLNGKDPK IVNGPEVLSK FVGETEKNVR
301: DLFADAEQDQ RTLGDASELH VIIFDEIDAI CKSRGSTRDG TGVHDSIVNQ LLTKIDGVEA LNNVLLIGMT NRKDLLDEAL LRPGRLEVQV EISLPDEAGR
401: LQILQIHTNK MKENSFLGTD INLQELAART KNYSGAELEG VVKSATSYAL NRQLSMDDLT KPVEEENIKI TMEDFLHAIY EVQPAFGAST DDLERCRLNG
501: MVDCGHRHNH IYKRAMLLVE QVKVSTRSPL VTCLLEGPSG SGKTALAATI GIDSDFPYVK IVSAETMIGL SESTKCAHIV KVFEDAYKSP MSIIILDDIE
601: RLLEFIAIGP RFSNIISQTL MVLLKRLPPK GKKLLVFGTT SEVTFLESVG ISDCFSVTHS VPTLQKEDAK KVLNQLNLFS EDDVDSAAEA LNDMPIKKIY
701: MLIEMAAQGE NGGSAEAIYA GREKININHF YDCLGDFIRF TG

Arabidopsis Description

NSFNSF [Source:UniProtKB/TrEMBL;Acc:A0A178UTB9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.