Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06186 | Canola | nucleus | 97.16 | 96.92 |
| Bra032449.1-P | Field mustard | nucleus | 96.66 | 95.23 |
| CDY47705 | Canola | nucleus | 90.48 | 91.32 |
| CDY10163 | Canola | nucleus | 90.07 | 90.75 |
| AT1G05910.1 | Thale cress | nucleus | 88.4 | 87.52 |
| VIT_05s0102g00260.t01 | Wine grape | nucleus | 70.28 | 69.13 |
| Solyc04g076180.2.1 | Tomato | nucleus | 67.61 | 67.84 |
| KRH24642 | Soybean | cytosol, nucleus | 67.7 | 67.53 |
| KRH29644 | Soybean | nucleus | 67.36 | 67.47 |
| GSMUA_Achr10P... | Banana | nucleus | 55.26 | 61.52 |
| Zm00001d021145_P003 | Maize | plasma membrane | 61.02 | 61.33 |
| EER97044 | Sorghum | cytosol | 61.27 | 61.32 |
| TraesCS5B01G299500.1 | Wheat | nucleus | 61.44 | 61.18 |
| TraesCS5A01G302000.1 | Wheat | nucleus | 61.27 | 61.17 |
| TraesCS5D01G306800.1 | Wheat | nucleus | 61.19 | 60.93 |
| Os09t0515100-02 | Rice | cytosol | 60.52 | 60.52 |
| HORVU5Hr1G078780.1 | Barley | nucleus | 61.1 | 60.45 |
| GSMUA_Achr11P... | Banana | nucleus | 57.43 | 57.53 |
| CDY39223 | Canola | cytosol, mitochondrion | 3.42 | 35.96 |
| CDY09518 | Canola | cytosol | 9.18 | 24.02 |
| CDY21320 | Canola | plastid | 11.85 | 19.89 |
| CDX90880 | Canola | plastid | 11.94 | 19.51 |
| CDY16637 | Canola | plastid | 11.94 | 19.38 |
| CDX86132 | Canola | plastid | 11.94 | 19.38 |
| CDY34435 | Canola | cytosol | 11.6 | 18.99 |
| CDY32219 | Canola | cytosol | 11.35 | 18.43 |
| CDX96221 | Canola | cytosol | 1.67 | 16.26 |
| CDX75809 | Canola | nucleus | 20.37 | 13.24 |
| CDX82447 | Canola | nucleus | 20.28 | 13.24 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:1.20.920.10 | Gene3D:3.40.50.300 | MapMan:35.1 | GO:A0A078FD79 | UniProt:A0A078FD79 |
| InterPro:AAA+_ATPase | InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | InterPro:Bromodomain | InterPro:Bromodomain-like_sf | EnsemblPlants:CDY10003 |
| ProteinID:CDY10003 | ProteinID:CDY10003.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005524 | EnsemblPlantsGene:GSBRNA2T00031784001 | InterPro:IPR001487 | InterPro:IPR036427 | InterPro:P-loop_NTPase | PFAM:PF00004 |
| PFAM:PF00439 | PRINTS:PR00503 | ScanProsite:PS00674 | PFscan:PS50014 | PANTHER:PTHR23069 | PANTHER:PTHR23069:SF0 |
| SMART:SM00297 | SMART:SM00382 | SUPFAM:SSF47370 | SUPFAM:SSF52540 | UniParc:UPI0004EEA4A8 | SEG:seg |
Description
BnaC08g44480DBnaC08g44480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FD79]
Coordinates
chrLK032000:-:430554..435869
Molecular Weight (calculated)
132672.0 Da
IEP (calculated)
5.998
GRAVY (calculated)
-0.590
Length
1198 amino acids
Sequence
(BLAST)
(BLAST)
0001: MHPKGSSQGD ETDAKPVRSS DRLRRRPRLY GRSCYYYSPN MVHNRKRKNT KTRTAASQIA KMLHKGNKPA RASNAAPDAS DLRRSTRKRR SSVNLEDYTD
0101: SSGAEDEDMM SPAYRTSRSR VNNGVHRNFS TSKSRKTMEA DSAPRREGLR PRRSKILANK RLKTESGANR YSSEEKDGRD ETEDGNELDD HDADGGENEV
0201: EEEDGDDEVD EEQEGRKRYD LRNRDEVRRM PTEEFNKQQQ PRSPRRVLHQ GMGTRAGRDV RRGGSRLHKR HRSTRTDDSD DSLLVDELDQ GLAIPWARGG
0301: NRSGPPWLFG GMDMHGPSSL GLNVGASGWG HQSDGLTALT SGVQTAGPSS KGGADIQPLQ INEDINFDDI GGLSEYINDL KEMVFFPLLY PEFFASYNIT
0401: PPRGVLLCGP PGTGKTLIAR ALACAASKAG QKVSFYMRKG ADVLSKWVGE AERQLKLLFE EAQRNQPSII FFDEIDGLAP VRSSKQEQIH NSIVSTLLAL
0501: MDGLDSRGQV VLIGATNRVD AIDGALRRPG RFDREFTFSL PGCEARAEIL DIHTRKWKNP PTRELKEELA ASCVGYCGAD LKALCTEAAI RAFREKYPQV
0601: YTSDDKYAID VGLVKVDKSH FVEAMSAITP AAHRGSVVQS RPLSPVVLPC LQRHLLKSMS LISDIFPSSA MSAEFTNLSM LSFGSAIPLV YRPRLLLLGG
0701: EGVGLDHLGP AILHELERFP IHSLGLPSLL SDPGAKTPEE ALVHIFTEAR RTTPSILYIP MFNNWWENAH EQLRAVFLTL LEELPSNLPI LLLATSYGEL
0801: SDIEDQPVFD NRSVYTVDKP SSEDRSLFFD RLIEAALSVI SGLNGKPDGS QALPELPKVV KEPTGPKPAE IKAKVEAEQH ALRRLRMCLR DVCNRILYDK
0901: RFSAFHFPVT DEDAPNYRSI IQNPMDTATL LQRVDAGQYL TCSPFLQDVD LIVKNAKAYN GDDYAGARIV SRAYELRDVV LGMLSQMDPA LLTYCDKISA
1001: QGGPSQIPDD LSGSILGLAP VVQMGTVTRA SARLRNLQPE ANIERDYEGL KKPKKTADAL CTDSAADKHQ DPDVEMTSVE AAGNSNSPAP CSADGDEEDQ
1101: SEQQSRKEEA ACAEEVSGDC SRDSVKSDED ISSGIESVKG VLMERTENYS IPQMERVYTR IMKGVLETLD KGLGDDDQSP KHSILRFLSE FSQCRANF
0101: SSGAEDEDMM SPAYRTSRSR VNNGVHRNFS TSKSRKTMEA DSAPRREGLR PRRSKILANK RLKTESGANR YSSEEKDGRD ETEDGNELDD HDADGGENEV
0201: EEEDGDDEVD EEQEGRKRYD LRNRDEVRRM PTEEFNKQQQ PRSPRRVLHQ GMGTRAGRDV RRGGSRLHKR HRSTRTDDSD DSLLVDELDQ GLAIPWARGG
0301: NRSGPPWLFG GMDMHGPSSL GLNVGASGWG HQSDGLTALT SGVQTAGPSS KGGADIQPLQ INEDINFDDI GGLSEYINDL KEMVFFPLLY PEFFASYNIT
0401: PPRGVLLCGP PGTGKTLIAR ALACAASKAG QKVSFYMRKG ADVLSKWVGE AERQLKLLFE EAQRNQPSII FFDEIDGLAP VRSSKQEQIH NSIVSTLLAL
0501: MDGLDSRGQV VLIGATNRVD AIDGALRRPG RFDREFTFSL PGCEARAEIL DIHTRKWKNP PTRELKEELA ASCVGYCGAD LKALCTEAAI RAFREKYPQV
0601: YTSDDKYAID VGLVKVDKSH FVEAMSAITP AAHRGSVVQS RPLSPVVLPC LQRHLLKSMS LISDIFPSSA MSAEFTNLSM LSFGSAIPLV YRPRLLLLGG
0701: EGVGLDHLGP AILHELERFP IHSLGLPSLL SDPGAKTPEE ALVHIFTEAR RTTPSILYIP MFNNWWENAH EQLRAVFLTL LEELPSNLPI LLLATSYGEL
0801: SDIEDQPVFD NRSVYTVDKP SSEDRSLFFD RLIEAALSVI SGLNGKPDGS QALPELPKVV KEPTGPKPAE IKAKVEAEQH ALRRLRMCLR DVCNRILYDK
0901: RFSAFHFPVT DEDAPNYRSI IQNPMDTATL LQRVDAGQYL TCSPFLQDVD LIVKNAKAYN GDDYAGARIV SRAYELRDVV LGMLSQMDPA LLTYCDKISA
1001: QGGPSQIPDD LSGSILGLAP VVQMGTVTRA SARLRNLQPE ANIERDYEGL KKPKKTADAL CTDSAADKHQ DPDVEMTSVE AAGNSNSPAP CSADGDEEDQ
1101: SEQQSRKEEA ACAEEVSGDC SRDSVKSDED ISSGIESVKG VLMERTENYS IPQMERVYTR IMKGVLETLD KGLGDDDQSP KHSILRFLSE FSQCRANF
0001: MHPKRSSQGD GSVTKPVRTS DRLRRRPKLH GRSYLYYSSP NMLHNRKRNT KTRTAASQIA KMLHKGNRPA RASNAAPIAS DLRRSTRKRR ISVNLEDYTD
0101: SSGAEDEDMM SPAYRTLRRR VHKNFSTSKS RKDMDAELAP RREGLRPRRS TTIANKRLKT ESGADQDTSE EKDGQDETEN GNELDDADDG ENEVEAEDEG
0201: NGEDEGDGED EGEEDGDDDE EGDEEQEGRK RYDLRNRAEV RRMPTGEINK QQQPRSPRRV LHQGMGTRVG RDGRRGGSRP HKRHRFTRTD DSDDSLLVDE
0301: LDQGPAIPWA RGGNRSGAPW LFGGLDTYGS SSLGLNVGAS GWGHQSDGLA ALTSGVQTAG PSSKGGADIQ PLQINEDINF DDIGGLSEYI NDLKEMVFFP
0401: LLYPEFFASY SITPPRGVLL CGPPGTGKTL IARALACAAS KAGQKVSFYM RKGADVLSKW VGEAERQLKL LFEEAQRNQP SIIFFDEIDG LAPVRSSKQE
0501: QIHNSIVSTL LALMDGLDSR GQVVLIGATN RVDAIDGALR RPGRFDREFN FSLPGCEARA EILDIHTRKW KHPPTRELKE ELAATCVGYC GADLKALCTE
0601: AAIRAFREKY PQVYTSDDKY AIDVGLVNVE KSHFVEAMSA ITPAAHRGSV VQSRPLSPVV LPCLHRHLLE SMSLISDIFP SSATSSELTK LSILTFGSAI
0701: PLVYRPRLLL LGGEGVGLDH LGPAILHELE KFPIHSLGLP SLLSDPGAKT PEEALVHIFS EARRTTPSIL YIPMFNNWWE NAHEQLRAVF LTLLEELPSN
0801: LPILLLATSY GELSDMEEQS VFDNRSVYTV DKPSSEDRSL FFDRLIEAAL SVISGLNGKP DGPQPLPELP KVPKEPTGPK PAEVKAKVEA EQHALRRLRM
0901: CLRDVCNRIL YDKRFSAFHF PVTDEDAPNY RSIIQIPMDT ATLLQRVDTG QYLTCTPFLQ DVDLIVRNAK AYNGDDYAGA RIVSRAYELR DVVHGMLSQM
1001: DPALLTYCDK IAAEGGPSLI PDDLSGSILG LAPVVQMGTV TRTSARLRNV QPEVNLDRDY EGLKKPKKTT DAVSIDSAAD KSQNQDSGQE MPSPDAANPQ
1101: SAAPSPTDGD REDQSEPPSK EASAEDMSGD SCKGPAAKSD KEISSRTESV KGVFMERTDN YSIPQMERLY TRIMKGVLET LDKGLRDDDN NPKHSILRFL
1201: SEFAQHQANF
0101: SSGAEDEDMM SPAYRTLRRR VHKNFSTSKS RKDMDAELAP RREGLRPRRS TTIANKRLKT ESGADQDTSE EKDGQDETEN GNELDDADDG ENEVEAEDEG
0201: NGEDEGDGED EGEEDGDDDE EGDEEQEGRK RYDLRNRAEV RRMPTGEINK QQQPRSPRRV LHQGMGTRVG RDGRRGGSRP HKRHRFTRTD DSDDSLLVDE
0301: LDQGPAIPWA RGGNRSGAPW LFGGLDTYGS SSLGLNVGAS GWGHQSDGLA ALTSGVQTAG PSSKGGADIQ PLQINEDINF DDIGGLSEYI NDLKEMVFFP
0401: LLYPEFFASY SITPPRGVLL CGPPGTGKTL IARALACAAS KAGQKVSFYM RKGADVLSKW VGEAERQLKL LFEEAQRNQP SIIFFDEIDG LAPVRSSKQE
0501: QIHNSIVSTL LALMDGLDSR GQVVLIGATN RVDAIDGALR RPGRFDREFN FSLPGCEARA EILDIHTRKW KHPPTRELKE ELAATCVGYC GADLKALCTE
0601: AAIRAFREKY PQVYTSDDKY AIDVGLVNVE KSHFVEAMSA ITPAAHRGSV VQSRPLSPVV LPCLHRHLLE SMSLISDIFP SSATSSELTK LSILTFGSAI
0701: PLVYRPRLLL LGGEGVGLDH LGPAILHELE KFPIHSLGLP SLLSDPGAKT PEEALVHIFS EARRTTPSIL YIPMFNNWWE NAHEQLRAVF LTLLEELPSN
0801: LPILLLATSY GELSDMEEQS VFDNRSVYTV DKPSSEDRSL FFDRLIEAAL SVISGLNGKP DGPQPLPELP KVPKEPTGPK PAEVKAKVEA EQHALRRLRM
0901: CLRDVCNRIL YDKRFSAFHF PVTDEDAPNY RSIIQIPMDT ATLLQRVDTG QYLTCTPFLQ DVDLIVRNAK AYNGDDYAGA RIVSRAYELR DVVHGMLSQM
1001: DPALLTYCDK IAAEGGPSLI PDDLSGSILG LAPVVQMGTV TRTSARLRNV QPEVNLDRDY EGLKKPKKTT DAVSIDSAAD KSQNQDSGQE MPSPDAANPQ
1101: SAAPSPTDGD REDQSEPPSK EASAEDMSGD SCKGPAAKSD KEISSRTESV KGVFMERTDN YSIPQMERLY TRIMKGVLET LDKGLRDDDN NPKHSILRFL
1201: SEFAQHQANF
Arabidopsis Description
ATPase family AAA domain-containing protein At1g05910 [Source:UniProtKB/Swiss-Prot;Acc:F4IAE9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.