Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G302000.1 | Wheat | nucleus | 99.17 | 99.42 |
| TraesCS5B01G299500.1 | Wheat | nucleus | 99.09 | 99.09 |
| HORVU5Hr1G078780.1 | Barley | nucleus | 97.26 | 96.61 |
| Os09t0515100-02 | Rice | cytosol | 84.87 | 85.23 |
| Zm00001d021145_P003 | Maize | plasma membrane | 83.29 | 84.06 |
| EER97044 | Sorghum | cytosol | 83.37 | 83.79 |
| GSMUA_Achr10P... | Banana | nucleus | 60.68 | 67.84 |
| VIT_05s0102g00260.t01 | Wine grape | nucleus | 66.58 | 65.76 |
| KRH24642 | Soybean | cytosol, nucleus | 65.59 | 65.7 |
| Solyc04g076180.2.1 | Tomato | nucleus | 64.51 | 64.99 |
| KRH29644 | Soybean | nucleus | 64.51 | 64.88 |
| GSMUA_Achr11P... | Banana | nucleus | 64.34 | 64.72 |
| CDY47705 | Canola | nucleus | 61.76 | 62.59 |
| CDY10163 | Canola | nucleus | 61.6 | 62.32 |
| AT1G05910.1 | Thale cress | nucleus | 62.26 | 61.9 |
| Bra015464.1-P | Field mustard | nucleus | 61.85 | 61.64 |
| CDY06186 | Canola | nucleus | 61.18 | 61.28 |
| CDY10003 | Canola | nucleus | 60.93 | 61.19 |
| Bra032449.1-P | Field mustard | nucleus | 61.76 | 61.1 |
| TraesCS1D01G341900.2 | Wheat | cytosol | 12.39 | 20.0 |
| TraesCS3D01G245000.1 | Wheat | cytosol | 20.28 | 12.1 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:1.20.920.10 | Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_CS |
| InterPro:ATPase_AAA_core | InterPro:Bromodomain | InterPro:Bromodomain-like_sf | InterPro:Bromodomain_CS | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0031936 | GO:GO:0040029 |
| GO:GO:0042393 | GO:GO:0080111 | InterPro:IPR001487 | InterPro:IPR036427 | InterPro:P-loop_NTPase | PFAM:PF00004 |
| PFAM:PF00439 | PRINTS:PR00503 | ScanProsite:PS00633 | ScanProsite:PS00674 | PFscan:PS50014 | PANTHER:PTHR23069 |
| PANTHER:PTHR23069:SF0 | SMART:SM00297 | SMART:SM00382 | SUPFAM:SSF47370 | SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS5D01G306800 |
| EnsemblPlants:TraesCS5D01G306800.1 | TIGR:cd00009 | TIGR:cd05528 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr5D:+:403069402..403076292
Molecular Weight (calculated)
134183.0 Da
IEP (calculated)
6.439
GRAVY (calculated)
-0.624
Length
1203 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAGMAGKGDE SVAPVRSSDR LRQRPKYYGR GYLYYSPNMR NKMNSNKKRT AASQIAKKLL RKPAAREPPA DSIAANLRRS TRKRRMSVTL EDYGTDSSSM
0101: EDDDLMRPRY RSSSKSKGDD QVSARPKRKK MSNSNSIPRR EGLRPRRSLR GQRHLPYQVS DDDQESSEEE HEQDQRENGN EIEEDGANEE EIDGGDEAEE
0201: DGDDEDGEEE QEVRRRYDLR DRAEVRRPSP QKEGKHRPQS PRRVLVQGVG PKNSKYLKKG GSRMHKRPRF SMPDDSDDSL LVDEPDEGPS MPWMRSGRGG
0301: MPPWLMGGLD MHNSAAWGLN AGASGWGHQG DTGVSTSSLM PGAQTAGPSS KGGADIQPLQ IDESVSFNDI GGLSEYIDAL KEMVFFPLLY PDFFANYHIT
0401: PPRGVLLCGP PGTGKTLIAR ALACAASKAG QKVSFYMRKG ADVLSKWVGE AERQLKLLFE EAQKNQPAII FFDEIDGLAP VRSSKQEQIH NSIVSTLLAL
0501: MDGLDSRGQV VLIGATNRID AIDGALRRPG RFDREFYFPL PGYEARAEIL DIHTRKWKEP PPKELKMELA ASCVGYCGAD LKALCTEAAI RAFREKYPQV
0601: YTSDDKFVID VDSVRVERNH FLEAMSTITP AAHRGSIVHS RPLSPVIAPC LKRHLEKIME RISDIFPYLS ALDLSKYSTL SYGSSIPLVY RPRLLMCGVE
0701: GVGLDHVGPA VLHELEKFPV HSLGLPSLLS DPSAKTPEEA LVHIFGEARR TTPSILYLPQ FHLWWDTAHE QLRAVLLTLL NELASNLPVL LLGTSSVAFD
0801: ELEEECASIF SSRNVYQVDR PSDDDRLRYF SILFESLLSL QMEDSRSKSK EQKSIDLPKA PKKVDGPKVS ELKAKAEAEQ HAVRRMRMCL RDICNRILYN
0901: KRFTAFHFPV SEEEVPDYRT IVHNPMDMAA VLQRVDSGQY FSQAAFLKDI NLIVTNAKTY NGDDYNGSRI VSRACELRDV VQGMLSQMDP SLVSFCDKIA
1001: AQGGPLQAMD DEDSSILQAP PVVQLVSVTR TSARLRNVQP EVDLSRSYEV LKRHKKSTEN EHGTSAKEST ARDGMSPGDV DLSKPTSPEE APKGPHSNGP
1101: LKEADKAPAE APPILPGSPP DPMETDNGED SAMPTSDDTL EQLEGLKQRF MELTVGYGVP QLERLYSRIM KGAIELTGKE TNKDHRRLVV RHLLAFVENS
1201: DNF
0101: EDDDLMRPRY RSSSKSKGDD QVSARPKRKK MSNSNSIPRR EGLRPRRSLR GQRHLPYQVS DDDQESSEEE HEQDQRENGN EIEEDGANEE EIDGGDEAEE
0201: DGDDEDGEEE QEVRRRYDLR DRAEVRRPSP QKEGKHRPQS PRRVLVQGVG PKNSKYLKKG GSRMHKRPRF SMPDDSDDSL LVDEPDEGPS MPWMRSGRGG
0301: MPPWLMGGLD MHNSAAWGLN AGASGWGHQG DTGVSTSSLM PGAQTAGPSS KGGADIQPLQ IDESVSFNDI GGLSEYIDAL KEMVFFPLLY PDFFANYHIT
0401: PPRGVLLCGP PGTGKTLIAR ALACAASKAG QKVSFYMRKG ADVLSKWVGE AERQLKLLFE EAQKNQPAII FFDEIDGLAP VRSSKQEQIH NSIVSTLLAL
0501: MDGLDSRGQV VLIGATNRID AIDGALRRPG RFDREFYFPL PGYEARAEIL DIHTRKWKEP PPKELKMELA ASCVGYCGAD LKALCTEAAI RAFREKYPQV
0601: YTSDDKFVID VDSVRVERNH FLEAMSTITP AAHRGSIVHS RPLSPVIAPC LKRHLEKIME RISDIFPYLS ALDLSKYSTL SYGSSIPLVY RPRLLMCGVE
0701: GVGLDHVGPA VLHELEKFPV HSLGLPSLLS DPSAKTPEEA LVHIFGEARR TTPSILYLPQ FHLWWDTAHE QLRAVLLTLL NELASNLPVL LLGTSSVAFD
0801: ELEEECASIF SSRNVYQVDR PSDDDRLRYF SILFESLLSL QMEDSRSKSK EQKSIDLPKA PKKVDGPKVS ELKAKAEAEQ HAVRRMRMCL RDICNRILYN
0901: KRFTAFHFPV SEEEVPDYRT IVHNPMDMAA VLQRVDSGQY FSQAAFLKDI NLIVTNAKTY NGDDYNGSRI VSRACELRDV VQGMLSQMDP SLVSFCDKIA
1001: AQGGPLQAMD DEDSSILQAP PVVQLVSVTR TSARLRNVQP EVDLSRSYEV LKRHKKSTEN EHGTSAKEST ARDGMSPGDV DLSKPTSPEE APKGPHSNGP
1101: LKEADKAPAE APPILPGSPP DPMETDNGED SAMPTSDDTL EQLEGLKQRF MELTVGYGVP QLERLYSRIM KGAIELTGKE TNKDHRRLVV RHLLAFVENS
1201: DNF
0001: MHPKRSSQGD GSVTKPVRTS DRLRRRPKLH GRSYLYYSSP NMLHNRKRNT KTRTAASQIA KMLHKGNRPA RASNAAPIAS DLRRSTRKRR ISVNLEDYTD
0101: SSGAEDEDMM SPAYRTLRRR VHKNFSTSKS RKDMDAELAP RREGLRPRRS TTIANKRLKT ESGADQDTSE EKDGQDETEN GNELDDADDG ENEVEAEDEG
0201: NGEDEGDGED EGEEDGDDDE EGDEEQEGRK RYDLRNRAEV RRMPTGEINK QQQPRSPRRV LHQGMGTRVG RDGRRGGSRP HKRHRFTRTD DSDDSLLVDE
0301: LDQGPAIPWA RGGNRSGAPW LFGGLDTYGS SSLGLNVGAS GWGHQSDGLA ALTSGVQTAG PSSKGGADIQ PLQINEDINF DDIGGLSEYI NDLKEMVFFP
0401: LLYPEFFASY SITPPRGVLL CGPPGTGKTL IARALACAAS KAGQKVSFYM RKGADVLSKW VGEAERQLKL LFEEAQRNQP SIIFFDEIDG LAPVRSSKQE
0501: QIHNSIVSTL LALMDGLDSR GQVVLIGATN RVDAIDGALR RPGRFDREFN FSLPGCEARA EILDIHTRKW KHPPTRELKE ELAATCVGYC GADLKALCTE
0601: AAIRAFREKY PQVYTSDDKY AIDVGLVNVE KSHFVEAMSA ITPAAHRGSV VQSRPLSPVV LPCLHRHLLE SMSLISDIFP SSATSSELTK LSILTFGSAI
0701: PLVYRPRLLL LGGEGVGLDH LGPAILHELE KFPIHSLGLP SLLSDPGAKT PEEALVHIFS EARRTTPSIL YIPMFNNWWE NAHEQLRAVF LTLLEELPSN
0801: LPILLLATSY GELSDMEEQS VFDNRSVYTV DKPSSEDRSL FFDRLIEAAL SVISGLNGKP DGPQPLPELP KVPKEPTGPK PAEVKAKVEA EQHALRRLRM
0901: CLRDVCNRIL YDKRFSAFHF PVTDEDAPNY RSIIQIPMDT ATLLQRVDTG QYLTCTPFLQ DVDLIVRNAK AYNGDDYAGA RIVSRAYELR DVVHGMLSQM
1001: DPALLTYCDK IAAEGGPSLI PDDLSGSILG LAPVVQMGTV TRTSARLRNV QPEVNLDRDY EGLKKPKKTT DAVSIDSAAD KSQNQDSGQE MPSPDAANPQ
1101: SAAPSPTDGD REDQSEPPSK EASAEDMSGD SCKGPAAKSD KEISSRTESV KGVFMERTDN YSIPQMERLY TRIMKGVLET LDKGLRDDDN NPKHSILRFL
1201: SEFAQHQANF
0101: SSGAEDEDMM SPAYRTLRRR VHKNFSTSKS RKDMDAELAP RREGLRPRRS TTIANKRLKT ESGADQDTSE EKDGQDETEN GNELDDADDG ENEVEAEDEG
0201: NGEDEGDGED EGEEDGDDDE EGDEEQEGRK RYDLRNRAEV RRMPTGEINK QQQPRSPRRV LHQGMGTRVG RDGRRGGSRP HKRHRFTRTD DSDDSLLVDE
0301: LDQGPAIPWA RGGNRSGAPW LFGGLDTYGS SSLGLNVGAS GWGHQSDGLA ALTSGVQTAG PSSKGGADIQ PLQINEDINF DDIGGLSEYI NDLKEMVFFP
0401: LLYPEFFASY SITPPRGVLL CGPPGTGKTL IARALACAAS KAGQKVSFYM RKGADVLSKW VGEAERQLKL LFEEAQRNQP SIIFFDEIDG LAPVRSSKQE
0501: QIHNSIVSTL LALMDGLDSR GQVVLIGATN RVDAIDGALR RPGRFDREFN FSLPGCEARA EILDIHTRKW KHPPTRELKE ELAATCVGYC GADLKALCTE
0601: AAIRAFREKY PQVYTSDDKY AIDVGLVNVE KSHFVEAMSA ITPAAHRGSV VQSRPLSPVV LPCLHRHLLE SMSLISDIFP SSATSSELTK LSILTFGSAI
0701: PLVYRPRLLL LGGEGVGLDH LGPAILHELE KFPIHSLGLP SLLSDPGAKT PEEALVHIFS EARRTTPSIL YIPMFNNWWE NAHEQLRAVF LTLLEELPSN
0801: LPILLLATSY GELSDMEEQS VFDNRSVYTV DKPSSEDRSL FFDRLIEAAL SVISGLNGKP DGPQPLPELP KVPKEPTGPK PAEVKAKVEA EQHALRRLRM
0901: CLRDVCNRIL YDKRFSAFHF PVTDEDAPNY RSIIQIPMDT ATLLQRVDTG QYLTCTPFLQ DVDLIVRNAK AYNGDDYAGA RIVSRAYELR DVVHGMLSQM
1001: DPALLTYCDK IAAEGGPSLI PDDLSGSILG LAPVVQMGTV TRTSARLRNV QPEVNLDRDY EGLKKPKKTT DAVSIDSAAD KSQNQDSGQE MPSPDAANPQ
1101: SAAPSPTDGD REDQSEPPSK EASAEDMSGD SCKGPAAKSD KEISSRTESV KGVFMERTDN YSIPQMERLY TRIMKGVLET LDKGLRDDDN NPKHSILRFL
1201: SEFAQHQANF
Arabidopsis Description
ATPase family AAA domain-containing protein At1g05910 [Source:UniProtKB/Swiss-Prot;Acc:F4IAE9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.