Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47705 | Canola | nucleus | 96.72 | 96.88 |
| Bra015464.1-P | Field mustard | nucleus | 96.64 | 95.19 |
| CDY06186 | Canola | nucleus | 91.17 | 90.26 |
| CDY10003 | Canola | nucleus | 90.75 | 90.07 |
| AT1G05910.1 | Thale cress | nucleus | 89.15 | 87.6 |
| VIT_05s0102g00260.t01 | Wine grape | nucleus | 71.4 | 69.7 |
| Solyc04g076180.2.1 | Tomato | nucleus | 69.55 | 69.26 |
| KRH24642 | Soybean | cytosol, nucleus | 69.22 | 68.53 |
| KRH29644 | Soybean | nucleus | 68.71 | 68.31 |
| TraesCS5B01G299500.1 | Wheat | nucleus | 62.57 | 61.85 |
| TraesCS5A01G302000.1 | Wheat | nucleus | 62.41 | 61.83 |
| TraesCS5D01G306800.1 | Wheat | nucleus | 62.32 | 61.6 |
| EER97044 | Sorghum | cytosol | 61.82 | 61.4 |
| Zm00001d021145_P003 | Maize | plasma membrane | 61.31 | 61.16 |
| HORVU5Hr1G078780.1 | Barley | nucleus | 62.15 | 61.02 |
| GSMUA_Achr10P... | Banana | nucleus | 55.09 | 60.87 |
| Os09t0515100-02 | Rice | cytosol | 61.14 | 60.68 |
| GSMUA_Achr11P... | Banana | nucleus | 58.2 | 57.86 |
| CDY39223 | Canola | cytosol, mitochondrion | 3.45 | 35.96 |
| CDY09518 | Canola | cytosol | 9.25 | 24.02 |
| CDY21320 | Canola | plastid | 11.86 | 19.75 |
| CDX90880 | Canola | plastid | 12.03 | 19.51 |
| CDY16637 | Canola | plastid | 12.03 | 19.38 |
| CDX86132 | Canola | plastid | 12.03 | 19.38 |
| CDY34435 | Canola | cytosol | 11.86 | 19.26 |
| CDY32219 | Canola | cytosol | 11.61 | 18.7 |
| CDX96221 | Canola | cytosol | 1.68 | 16.26 |
| CDX75809 | Canola | nucleus | 20.69 | 13.35 |
| CDX82447 | Canola | nucleus | 20.27 | 13.13 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:1.20.920.10 | Gene3D:3.40.50.300 | MapMan:35.1 | GO:A0A078FDM1 | UniProt:A0A078FDM1 |
| InterPro:AAA+_ATPase | InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | InterPro:Bromodomain | InterPro:Bromodomain-like_sf | EnsemblPlants:CDY10163 |
| ProteinID:CDY10163 | ProteinID:CDY10163.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005524 | EnsemblPlantsGene:GSBRNA2T00031977001 | InterPro:IPR001487 | InterPro:IPR036427 | InterPro:P-loop_NTPase | PFAM:PF00004 |
| PFAM:PF00439 | PRINTS:PR00503 | ScanProsite:PS00674 | PFscan:PS50014 | PANTHER:PTHR23069 | PANTHER:PTHR23069:SF0 |
| SMART:SM00297 | SMART:SM00382 | SUPFAM:SSF47370 | SUPFAM:SSF52540 | UniParc:UPI0004EED492 | SEG:seg |
Description
BnaC05g04060DBnaC05g04060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FDM1]
Coordinates
chrLK032001:+:334421..339696
Molecular Weight (calculated)
131959.0 Da
IEP (calculated)
5.879
GRAVY (calculated)
-0.618
Length
1189 amino acids
Sequence
(BLAST)
(BLAST)
0001: MHPKGSSQGD GSDTKPVRSS DRLRRRPKLY GRSYYYYSPN LHNRKRNTKT RTAASQIAKM LHKGNKPARA SNATPIASDL RRSTRKRRLS VNLEDYTDSS
0101: GGEDEDMMSP AYRTLRSRVS NGVHRNRKAK ETESAPRREG LRPRRSKIIA NRRLKTESGA NQDSSEEKDG PEETENGNEL DDHDADDGED EVEAEDEDEE
0201: EDGDDDEDEE QEGRKRYDLR NRAEVRRMPT EEINKQQQPR SPRRVLHQGM GTRNGRDVRR GGSRLHKRHR FARTDDSDDS LLVDELDQGP AIPWARGGNR
0301: SGPPWLFGGL DTYGSSSLGL NAGASGWGHQ SDGLTALTSG AQTAGPSSKG GADIQPLQIN ENINFDDIGG LSEYINDLKE MVFFPLLYPE FFASYNITPP
0401: RGVLLCGPPG TGKTLIARAL ACAASKAGQK VSFYMRKGAD VLSKWVGEAE RQLKLLFEEA QRNQPSIIFF DEIDGLAPVR SSKQEQIHNS IVSTLLALMD
0501: GLDSRGQVVL IGATNRVDAI DGALRRPGRF DREFNFSLPG CEARAEILDI HTRKWKNPPS RELKEELAAS CVGYCGADLK ALCTEAAIRA FREKYPQVYT
0601: SDDKYAIDVG LVKVNKSHFV EAMTAITPAA HRGSVVQSRP LSPVVLPCLH RHLLGSMRLI SDIFPSSAMS SELTKLSMLS FGSAIPLVYR PRLLLLGGEG
0701: VGLDHLGPAI LHELEKFPIH SLGLPSLLSD PGAKTPEEAL VHIFSEARRT TPSILYIPMF NNWWENAHEQ LRAVFLTLLE ELPSNLPILL LATSYGEISD
0801: IEEQSVFDKR SVYTVDKPSG EDRSLFFDRL IEAALSVISG LNGKPDGPPL PELPKVPKEP TGPKPAEIRA KVEAEQHALR RLRMCLRDVC NRILYDKRFS
0901: AFHFPVSDED APNYRTIIQI PMDTATLLQR VDAGQYLTCS PFLQDVDLIV KNAKAYNGDD YAGARIVSRA YELRDVVHGM LAQMDPALLT YCDKIAAEGG
1001: PSQIPDDLSE SILGLAPVVQ MGTVTRASAR LRNMQPEVNI DRDHEGFKKP KKTADAACTD SAADKPEHQD SDVEMTPLEA AKSNSSDGDK EDQTRKEDEA
1101: CGEEVSGDCS QDSVKSDEDI SSEIESVKGV LMERTENYSI PQMERVYTRI MKGVLETLDK GLGDDDHHQS LKHSILRFLS KFAQLQANF
0101: GGEDEDMMSP AYRTLRSRVS NGVHRNRKAK ETESAPRREG LRPRRSKIIA NRRLKTESGA NQDSSEEKDG PEETENGNEL DDHDADDGED EVEAEDEDEE
0201: EDGDDDEDEE QEGRKRYDLR NRAEVRRMPT EEINKQQQPR SPRRVLHQGM GTRNGRDVRR GGSRLHKRHR FARTDDSDDS LLVDELDQGP AIPWARGGNR
0301: SGPPWLFGGL DTYGSSSLGL NAGASGWGHQ SDGLTALTSG AQTAGPSSKG GADIQPLQIN ENINFDDIGG LSEYINDLKE MVFFPLLYPE FFASYNITPP
0401: RGVLLCGPPG TGKTLIARAL ACAASKAGQK VSFYMRKGAD VLSKWVGEAE RQLKLLFEEA QRNQPSIIFF DEIDGLAPVR SSKQEQIHNS IVSTLLALMD
0501: GLDSRGQVVL IGATNRVDAI DGALRRPGRF DREFNFSLPG CEARAEILDI HTRKWKNPPS RELKEELAAS CVGYCGADLK ALCTEAAIRA FREKYPQVYT
0601: SDDKYAIDVG LVKVNKSHFV EAMTAITPAA HRGSVVQSRP LSPVVLPCLH RHLLGSMRLI SDIFPSSAMS SELTKLSMLS FGSAIPLVYR PRLLLLGGEG
0701: VGLDHLGPAI LHELEKFPIH SLGLPSLLSD PGAKTPEEAL VHIFSEARRT TPSILYIPMF NNWWENAHEQ LRAVFLTLLE ELPSNLPILL LATSYGEISD
0801: IEEQSVFDKR SVYTVDKPSG EDRSLFFDRL IEAALSVISG LNGKPDGPPL PELPKVPKEP TGPKPAEIRA KVEAEQHALR RLRMCLRDVC NRILYDKRFS
0901: AFHFPVSDED APNYRTIIQI PMDTATLLQR VDAGQYLTCS PFLQDVDLIV KNAKAYNGDD YAGARIVSRA YELRDVVHGM LAQMDPALLT YCDKIAAEGG
1001: PSQIPDDLSE SILGLAPVVQ MGTVTRASAR LRNMQPEVNI DRDHEGFKKP KKTADAACTD SAADKPEHQD SDVEMTPLEA AKSNSSDGDK EDQTRKEDEA
1101: CGEEVSGDCS QDSVKSDEDI SSEIESVKGV LMERTENYSI PQMERVYTRI MKGVLETLDK GLGDDDHHQS LKHSILRFLS KFAQLQANF
0001: MHPKRSSQGD GSVTKPVRTS DRLRRRPKLH GRSYLYYSSP NMLHNRKRNT KTRTAASQIA KMLHKGNRPA RASNAAPIAS DLRRSTRKRR ISVNLEDYTD
0101: SSGAEDEDMM SPAYRTLRRR VHKNFSTSKS RKDMDAELAP RREGLRPRRS TTIANKRLKT ESGADQDTSE EKDGQDETEN GNELDDADDG ENEVEAEDEG
0201: NGEDEGDGED EGEEDGDDDE EGDEEQEGRK RYDLRNRAEV RRMPTGEINK QQQPRSPRRV LHQGMGTRVG RDGRRGGSRP HKRHRFTRTD DSDDSLLVDE
0301: LDQGPAIPWA RGGNRSGAPW LFGGLDTYGS SSLGLNVGAS GWGHQSDGLA ALTSGVQTAG PSSKGGADIQ PLQINEDINF DDIGGLSEYI NDLKEMVFFP
0401: LLYPEFFASY SITPPRGVLL CGPPGTGKTL IARALACAAS KAGQKVSFYM RKGADVLSKW VGEAERQLKL LFEEAQRNQP SIIFFDEIDG LAPVRSSKQE
0501: QIHNSIVSTL LALMDGLDSR GQVVLIGATN RVDAIDGALR RPGRFDREFN FSLPGCEARA EILDIHTRKW KHPPTRELKE ELAATCVGYC GADLKALCTE
0601: AAIRAFREKY PQVYTSDDKY AIDVGLVNVE KSHFVEAMSA ITPAAHRGSV VQSRPLSPVV LPCLHRHLLE SMSLISDIFP SSATSSELTK LSILTFGSAI
0701: PLVYRPRLLL LGGEGVGLDH LGPAILHELE KFPIHSLGLP SLLSDPGAKT PEEALVHIFS EARRTTPSIL YIPMFNNWWE NAHEQLRAVF LTLLEELPSN
0801: LPILLLATSY GELSDMEEQS VFDNRSVYTV DKPSSEDRSL FFDRLIEAAL SVISGLNGKP DGPQPLPELP KVPKEPTGPK PAEVKAKVEA EQHALRRLRM
0901: CLRDVCNRIL YDKRFSAFHF PVTDEDAPNY RSIIQIPMDT ATLLQRVDTG QYLTCTPFLQ DVDLIVRNAK AYNGDDYAGA RIVSRAYELR DVVHGMLSQM
1001: DPALLTYCDK IAAEGGPSLI PDDLSGSILG LAPVVQMGTV TRTSARLRNV QPEVNLDRDY EGLKKPKKTT DAVSIDSAAD KSQNQDSGQE MPSPDAANPQ
1101: SAAPSPTDGD REDQSEPPSK EASAEDMSGD SCKGPAAKSD KEISSRTESV KGVFMERTDN YSIPQMERLY TRIMKGVLET LDKGLRDDDN NPKHSILRFL
1201: SEFAQHQANF
0101: SSGAEDEDMM SPAYRTLRRR VHKNFSTSKS RKDMDAELAP RREGLRPRRS TTIANKRLKT ESGADQDTSE EKDGQDETEN GNELDDADDG ENEVEAEDEG
0201: NGEDEGDGED EGEEDGDDDE EGDEEQEGRK RYDLRNRAEV RRMPTGEINK QQQPRSPRRV LHQGMGTRVG RDGRRGGSRP HKRHRFTRTD DSDDSLLVDE
0301: LDQGPAIPWA RGGNRSGAPW LFGGLDTYGS SSLGLNVGAS GWGHQSDGLA ALTSGVQTAG PSSKGGADIQ PLQINEDINF DDIGGLSEYI NDLKEMVFFP
0401: LLYPEFFASY SITPPRGVLL CGPPGTGKTL IARALACAAS KAGQKVSFYM RKGADVLSKW VGEAERQLKL LFEEAQRNQP SIIFFDEIDG LAPVRSSKQE
0501: QIHNSIVSTL LALMDGLDSR GQVVLIGATN RVDAIDGALR RPGRFDREFN FSLPGCEARA EILDIHTRKW KHPPTRELKE ELAATCVGYC GADLKALCTE
0601: AAIRAFREKY PQVYTSDDKY AIDVGLVNVE KSHFVEAMSA ITPAAHRGSV VQSRPLSPVV LPCLHRHLLE SMSLISDIFP SSATSSELTK LSILTFGSAI
0701: PLVYRPRLLL LGGEGVGLDH LGPAILHELE KFPIHSLGLP SLLSDPGAKT PEEALVHIFS EARRTTPSIL YIPMFNNWWE NAHEQLRAVF LTLLEELPSN
0801: LPILLLATSY GELSDMEEQS VFDNRSVYTV DKPSSEDRSL FFDRLIEAAL SVISGLNGKP DGPQPLPELP KVPKEPTGPK PAEVKAKVEA EQHALRRLRM
0901: CLRDVCNRIL YDKRFSAFHF PVTDEDAPNY RSIIQIPMDT ATLLQRVDTG QYLTCTPFLQ DVDLIVRNAK AYNGDDYAGA RIVSRAYELR DVVHGMLSQM
1001: DPALLTYCDK IAAEGGPSLI PDDLSGSILG LAPVVQMGTV TRTSARLRNV QPEVNLDRDY EGLKKPKKTT DAVSIDSAAD KSQNQDSGQE MPSPDAANPQ
1101: SAAPSPTDGD REDQSEPPSK EASAEDMSGD SCKGPAAKSD KEISSRTESV KGVFMERTDN YSIPQMERLY TRIMKGVLET LDKGLRDDDN NPKHSILRFL
1201: SEFAQHQANF
Arabidopsis Description
ATPase family AAA domain-containing protein At1g05910 [Source:UniProtKB/Swiss-Prot;Acc:F4IAE9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.