Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | nucleus | 81.69 | 73.5 |
| Zm00001d021145_P003 | Maize | plasma membrane | 68.22 | 61.58 |
| EER97044 | Sorghum | cytosol | 68.4 | 61.49 |
| Os09t0515100-02 | Rice | cytosol | 67.94 | 61.02 |
| TraesCS5D01G306800.1 | Wheat | nucleus | 67.84 | 60.68 |
| TraesCS5A01G302000.1 | Wheat | nucleus | 67.66 | 60.67 |
| HORVU5Hr1G078780.1 | Barley | nucleus | 68.12 | 60.53 |
| TraesCS5B01G299500.1 | Wheat | nucleus | 67.66 | 60.52 |
| VIT_05s0102g00260.t01 | Wine grape | nucleus | 68.4 | 60.43 |
| Solyc04g076180.2.1 | Tomato | nucleus | 66.54 | 59.97 |
| KRH29644 | Soybean | nucleus | 65.43 | 58.86 |
| KRH24642 | Soybean | cytosol, nucleus | 65.33 | 58.53 |
| CDY47705 | Canola | nucleus | 61.06 | 55.35 |
| CDY10003 | Canola | nucleus | 61.52 | 55.26 |
| CDY10163 | Canola | nucleus | 60.87 | 55.09 |
| AT1G05910.1 | Thale cress | nucleus | 61.9 | 55.04 |
| CDY06186 | Canola | nucleus | 61.43 | 55.04 |
| Bra032449.1-P | Field mustard | nucleus | 61.8 | 54.69 |
| Bra015464.1-P | Field mustard | nucleus | 60.97 | 54.35 |
| GSMUA_Achr6P26250_001 | Banana | cytosol | 0.74 | 17.39 |
| GSMUA_Achr8P27650_001 | Banana | cytosol | 10.69 | 15.39 |
| GSMUA_Achr9P05850_001 | Banana | cytosol | 10.59 | 15.34 |
| GSMUA_Achr6P26190_001 | Banana | cytosol | 1.95 | 12.43 |
| GSMUA_Achr1P13870_001 | Banana | nucleus, plastid | 17.47 | 10.62 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:1.20.920.10 | Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:ATPase_AAA_core | InterPro:Bromodomain |
| InterPro:Bromodomain-like_sf | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 |
| EnsemblPlantsGene:GSMUA_Achr10G04260_001 | EnsemblPlants:GSMUA_Achr10P04260_001 | EnsemblPlants:GSMUA_Achr10T04260_001 | InterPro:IPR001487 | InterPro:IPR036427 | UniProt:M0RFA3 |
| InterPro:P-loop_NTPase | PFAM:PF00004 | PFAM:PF00439 | PRINTS:PR00503 | PFscan:PS50014 | PANTHER:PTHR23069 |
| PANTHER:PTHR23069:SF0 | SMART:SM00297 | SUPFAM:SSF47370 | SUPFAM:SSF52540 | UniParc:UPI000296B48C | SEG:seg |
Description
bromodomain protein 103, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G04260_001]
Coordinates
chr10:+:13800970..13813273
Molecular Weight (calculated)
119428.0 Da
IEP (calculated)
5.398
GRAVY (calculated)
-0.432
Length
1076 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPPSDVRDYL NCSSSISFLK ACAVWFCLSL VDRYILSLES LILDSVATNL RRSTRKRKMS INLEDYETDT SGTEDDDLMT PRYRSSRNKA ENNVSHDEVL
0101: GPRNKKITNT NSLPRREEED IGNEEDGDGG DEVAEDGDDE DGEEEQEGRR RYDLRNRAEV RRLSSEKDGQ QRPRSPRRVL HHGMGSKSNR YLRRGGSRVH
0201: RRHRLSLPDD SDDSLLVDEM DQGPSIPWTR NGSRSGTPWL LGGLDMHGAT AWGLNVAASG WGFQGDNIAS LTTGVQTAGP SSKGGADIQP LQVDESVSFE
0301: DIGGLSEYID ALKEMVFFPL LYPDFFAKYH ITPPRGVLLC GPPGTGKTLI ARALACAASK AGQKVSFYMR KGADVLSKWV GEAERQSSKQ EQIHNSIVST
0401: LLALMDGLDS RGQVFVFPLP GYEARAEILN IHTRKWKEPP SKELKMELAA NCVGYCGADL KSLCTEAAIR AFREKYPQVY TSDDKFVIDV DSIRVEKHHF
0501: LEAMSTITPA AHRGSIVHSR PLSSVVAPCL QRHLQKIMEH ISDIFPCLSA VDVSRLSVLS YSSALPLVYR PRLLIYGDEN VGLDHVGPAV LHELEKFPVH
0601: SLGLPSLLSD PSAKTPEEAL VHIFGEARRT TPSILYLPQF HIWWETAHEQ LKAVLMSLLE ELPSNLPILL VGTSSVSLSK MDEDSTSIFA LRNVYQVDKP
0701: TADDRSQFLG KLVEAVLSMQ VDESTNKLEE MTSLPELPKA PKEVSGPKAS ELKAKAEAEQ HALRRLRMCL RDVCNRLLYD KRFSVFHYPV LDEDAPDYRS
0801: IIHNPMDVAT LLQHVDCGQY LTLAAFLRDI DLIVANAKAY NGDDYNGARI VSRAYELRDV VQGMLSQMDP ALVSFCDKIA VQGGPLHLAD DMEELNIPAA
0901: PVVQLASVTR TSARLRNVQP DVNLAQSYEA LRRPKKNADH DPGSGRDERA PVEPDSTTVS SYPGLQDPPD TNGPSGGPED HSNTGLPESL EVASSPPANE
1001: NIVDAVMTDT DISKQKDSVK QHFMERTGGY GVPQLERLYA RVIKGVMAIG SERREEDRRL LVLGHLLKFV EDDEIF
0101: GPRNKKITNT NSLPRREEED IGNEEDGDGG DEVAEDGDDE DGEEEQEGRR RYDLRNRAEV RRLSSEKDGQ QRPRSPRRVL HHGMGSKSNR YLRRGGSRVH
0201: RRHRLSLPDD SDDSLLVDEM DQGPSIPWTR NGSRSGTPWL LGGLDMHGAT AWGLNVAASG WGFQGDNIAS LTTGVQTAGP SSKGGADIQP LQVDESVSFE
0301: DIGGLSEYID ALKEMVFFPL LYPDFFAKYH ITPPRGVLLC GPPGTGKTLI ARALACAASK AGQKVSFYMR KGADVLSKWV GEAERQSSKQ EQIHNSIVST
0401: LLALMDGLDS RGQVFVFPLP GYEARAEILN IHTRKWKEPP SKELKMELAA NCVGYCGADL KSLCTEAAIR AFREKYPQVY TSDDKFVIDV DSIRVEKHHF
0501: LEAMSTITPA AHRGSIVHSR PLSSVVAPCL QRHLQKIMEH ISDIFPCLSA VDVSRLSVLS YSSALPLVYR PRLLIYGDEN VGLDHVGPAV LHELEKFPVH
0601: SLGLPSLLSD PSAKTPEEAL VHIFGEARRT TPSILYLPQF HIWWETAHEQ LKAVLMSLLE ELPSNLPILL VGTSSVSLSK MDEDSTSIFA LRNVYQVDKP
0701: TADDRSQFLG KLVEAVLSMQ VDESTNKLEE MTSLPELPKA PKEVSGPKAS ELKAKAEAEQ HALRRLRMCL RDVCNRLLYD KRFSVFHYPV LDEDAPDYRS
0801: IIHNPMDVAT LLQHVDCGQY LTLAAFLRDI DLIVANAKAY NGDDYNGARI VSRAYELRDV VQGMLSQMDP ALVSFCDKIA VQGGPLHLAD DMEELNIPAA
0901: PVVQLASVTR TSARLRNVQP DVNLAQSYEA LRRPKKNADH DPGSGRDERA PVEPDSTTVS SYPGLQDPPD TNGPSGGPED HSNTGLPESL EVASSPPANE
1001: NIVDAVMTDT DISKQKDSVK QHFMERTGGY GVPQLERLYA RVIKGVMAIG SERREEDRRL LVLGHLLKFV EDDEIF
0001: MHPKRSSQGD GSVTKPVRTS DRLRRRPKLH GRSYLYYSSP NMLHNRKRNT KTRTAASQIA KMLHKGNRPA RASNAAPIAS DLRRSTRKRR ISVNLEDYTD
0101: SSGAEDEDMM SPAYRTLRRR VHKNFSTSKS RKDMDAELAP RREGLRPRRS TTIANKRLKT ESGADQDTSE EKDGQDETEN GNELDDADDG ENEVEAEDEG
0201: NGEDEGDGED EGEEDGDDDE EGDEEQEGRK RYDLRNRAEV RRMPTGEINK QQQPRSPRRV LHQGMGTRVG RDGRRGGSRP HKRHRFTRTD DSDDSLLVDE
0301: LDQGPAIPWA RGGNRSGAPW LFGGLDTYGS SSLGLNVGAS GWGHQSDGLA ALTSGVQTAG PSSKGGADIQ PLQINEDINF DDIGGLSEYI NDLKEMVFFP
0401: LLYPEFFASY SITPPRGVLL CGPPGTGKTL IARALACAAS KAGQKVSFYM RKGADVLSKW VGEAERQLKL LFEEAQRNQP SIIFFDEIDG LAPVRSSKQE
0501: QIHNSIVSTL LALMDGLDSR GQVVLIGATN RVDAIDGALR RPGRFDREFN FSLPGCEARA EILDIHTRKW KHPPTRELKE ELAATCVGYC GADLKALCTE
0601: AAIRAFREKY PQVYTSDDKY AIDVGLVNVE KSHFVEAMSA ITPAAHRGSV VQSRPLSPVV LPCLHRHLLE SMSLISDIFP SSATSSELTK LSILTFGSAI
0701: PLVYRPRLLL LGGEGVGLDH LGPAILHELE KFPIHSLGLP SLLSDPGAKT PEEALVHIFS EARRTTPSIL YIPMFNNWWE NAHEQLRAVF LTLLEELPSN
0801: LPILLLATSY GELSDMEEQS VFDNRSVYTV DKPSSEDRSL FFDRLIEAAL SVISGLNGKP DGPQPLPELP KVPKEPTGPK PAEVKAKVEA EQHALRRLRM
0901: CLRDVCNRIL YDKRFSAFHF PVTDEDAPNY RSIIQIPMDT ATLLQRVDTG QYLTCTPFLQ DVDLIVRNAK AYNGDDYAGA RIVSRAYELR DVVHGMLSQM
1001: DPALLTYCDK IAAEGGPSLI PDDLSGSILG LAPVVQMGTV TRTSARLRNV QPEVNLDRDY EGLKKPKKTT DAVSIDSAAD KSQNQDSGQE MPSPDAANPQ
1101: SAAPSPTDGD REDQSEPPSK EASAEDMSGD SCKGPAAKSD KEISSRTESV KGVFMERTDN YSIPQMERLY TRIMKGVLET LDKGLRDDDN NPKHSILRFL
1201: SEFAQHQANF
0101: SSGAEDEDMM SPAYRTLRRR VHKNFSTSKS RKDMDAELAP RREGLRPRRS TTIANKRLKT ESGADQDTSE EKDGQDETEN GNELDDADDG ENEVEAEDEG
0201: NGEDEGDGED EGEEDGDDDE EGDEEQEGRK RYDLRNRAEV RRMPTGEINK QQQPRSPRRV LHQGMGTRVG RDGRRGGSRP HKRHRFTRTD DSDDSLLVDE
0301: LDQGPAIPWA RGGNRSGAPW LFGGLDTYGS SSLGLNVGAS GWGHQSDGLA ALTSGVQTAG PSSKGGADIQ PLQINEDINF DDIGGLSEYI NDLKEMVFFP
0401: LLYPEFFASY SITPPRGVLL CGPPGTGKTL IARALACAAS KAGQKVSFYM RKGADVLSKW VGEAERQLKL LFEEAQRNQP SIIFFDEIDG LAPVRSSKQE
0501: QIHNSIVSTL LALMDGLDSR GQVVLIGATN RVDAIDGALR RPGRFDREFN FSLPGCEARA EILDIHTRKW KHPPTRELKE ELAATCVGYC GADLKALCTE
0601: AAIRAFREKY PQVYTSDDKY AIDVGLVNVE KSHFVEAMSA ITPAAHRGSV VQSRPLSPVV LPCLHRHLLE SMSLISDIFP SSATSSELTK LSILTFGSAI
0701: PLVYRPRLLL LGGEGVGLDH LGPAILHELE KFPIHSLGLP SLLSDPGAKT PEEALVHIFS EARRTTPSIL YIPMFNNWWE NAHEQLRAVF LTLLEELPSN
0801: LPILLLATSY GELSDMEEQS VFDNRSVYTV DKPSSEDRSL FFDRLIEAAL SVISGLNGKP DGPQPLPELP KVPKEPTGPK PAEVKAKVEA EQHALRRLRM
0901: CLRDVCNRIL YDKRFSAFHF PVTDEDAPNY RSIIQIPMDT ATLLQRVDTG QYLTCTPFLQ DVDLIVRNAK AYNGDDYAGA RIVSRAYELR DVVHGMLSQM
1001: DPALLTYCDK IAAEGGPSLI PDDLSGSILG LAPVVQMGTV TRTSARLRNV QPEVNLDRDY EGLKKPKKTT DAVSIDSAAD KSQNQDSGQE MPSPDAANPQ
1101: SAAPSPTDGD REDQSEPPSK EASAEDMSGD SCKGPAAKSD KEISSRTESV KGVFMERTDN YSIPQMERLY TRIMKGVLET LDKGLRDDDN NPKHSILRFL
1201: SEFAQHQANF
Arabidopsis Description
ATPase family AAA domain-containing protein At1g05910 [Source:UniProtKB/Swiss-Prot;Acc:F4IAE9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.