Factsheet for GSMUA_Achr9P05850_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion
BaCelLo:	cytosol
EpiLoc:	endoplasmic reticulum
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P27650_001	Banana	cytosol	90.98	90.5
GSMUA_Achr6P26250_001	Banana	cytosol	4.85	78.26
EER93779	Sorghum	cytosol	76.72	76.72
Zm00001d038808_P001	Maize	cytosol	75.91	76.11
Os05t0519400-01	Rice	plasma membrane	75.77	75.77
TraesCS1D01G341900.2	Wheat	cytosol	75.64	75.44
TraesCS1B01G352200.2	Wheat	cytosol, mitochondrion	75.1	75.1
KRH50033	Soybean	endoplasmic reticulum, nucleus	75.24	74.93
TraesCS1A01G339900.1	Wheat	unclear	75.24	74.83
KRH20460	Soybean	endoplasmic reticulum	74.7	74.8
Zm00001d051286_P013	Maize	cytosol	75.37	73.68
HORVU1Hr1G076180.22	Barley	cytosol	75.24	70.31
KRH24495	Soybean	cytosol	17.77	56.41
GSMUA_Achr6P26190_001	Banana	cytosol	11.31	49.7
Zm00001d000156_P001	Maize	cytosol	19.11	33.33
GSMUA_Achr10P...	Banana	nucleus	15.34	10.59
GSMUA_Achr11P...	Banana	nucleus	15.88	9.87
GSMUA_Achr1P13870_001	Banana	nucleus, plastid	16.42	6.89

Protein Annotations

Gene3D:1.10.8.60	Gene3D:2.40.40.20	Gene3D:3.10.330.10	Gene3D:3.40.50.300	MapMan:50.3.6	InterPro:AAA+_ATPase
InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	InterPro:Asp_de-COase-like_dom_sf	InterPro:CDC48_domain_2-like_sf	InterPro:CDC4_N-term_subdom	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	EnsemblPlantsGene:GSMUA_Achr9G05850_001	EnsemblPlants:GSMUA_Achr9P05850_001	EnsemblPlants:GSMUA_Achr9T05850_001
UniProt:M0TXU4	InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23078	PANTHER:PTHR23078:SF11
SMART:SM00382	SMART:SM01073	SUPFAM:SSF50692	SUPFAM:SSF52540	SUPFAM:SSF54585	UniParc:UPI000294D2C5
SEG:seg	:	:	:	:	:

Description

Vesicle-fusing ATPase [Source:GMGC_GENE;Acc:GSMUA_Achr9G05850_001]

Coordinates

chr9:-:3711029..3722703

Molecular Weight (calculated)

81861.8 Da

IEP (calculated)

5.839

GRAVY (calculated)

-0.077

Length

743 amino acids

Sequence
(BLAST)

001: MAGRFGFGAS SAADSMTVVN TPTQDLALTN FAYCSPADMN KFATPGSKHV LIFVGDSHLL ITTAHQNIPS DHIALNAIQR RHTRVSSGDQ ISVSRFVPPD
101: NFKLALLTLE LDFVKGKTNR TEQLDAVLLA QQLQKKFIDQ IMTTGQKVLF EYCGTNYIFT ISQALLEGQD DSKGVDRGMI SMETYFVFEA SPNSGIKIIN
201: QREAASSKIF RHKEFNLLKL GIGGLSVEFT EIFRRAFASR VFPSHVVSKL GIKHVKGMLL YGPPGTGKTL MARQIGKLLN GREPKIVNGP EVLSKYVGET
301: EKNVRDLFAD AENDQRTQGD QSDLHVIIFD EIDAICKSRG STRDGTGVHD SIVNQLLTKI DGVESLNNVL LIGMTNRKDL LDEALLRPGR LEVHVEINLP
401: DENGRLQILQ IHTSKMKENS FLAADVSLQE LAARTKNYSG AELEGVVKSA VSFALNRQIS MDDLTKPLDE ESIKVTMDDF LHALHEIVPA FGASTDDLER
501: CRLNGIVDCG ERHMHIHERA MLLVEQVKVS QGSPLVTCLL EGLSGSGKTA MAATIGIESD FPFVKIISAE TMIGLSEGSK CAQIVKVFED AYKSQLSIII
601: LDDIERLLEY VAIGPRFSNL ISQTLLVLLK RLPPKGKNML VIGTSSEVGF LESLGICDAF SVTYHVPRLN REDAKKVLQS LSVFSEDDLD LAVEELNDIS
701: IKKLYMLVEM AAQGSDGKSA EAIRSGKEKI DLNHFYDILQ DIL

Best Arabidopsis Sequence Match ( AT4G04910.1 )
(BLAST)

001: MAGRYGSQVM TMTVTNTPSA DLAFTNLAYC SSSDLRQFSV PGSDLFLANV ADSFILSLCG HGSIRDGNIA LNAIQRRHAR VSTGDMVSVS RFVPPENFDL
101: AMLTLELEFV KKGTKSEQVD AALLSTQLKR KYTNQVLTVG QKATFEYHGT NYILTVNRAD VEGQDHTNGI ERGLLSKDTY IVFEASNASG IKIVNQREAA
201: SSNIFKHKEF NLESLGIGGL GAEFADIFRR AFASRVFPPH VTSRLGIKHV KGMLLFGPPG TGKTLMARQI GKMLNGKDPK IVNGPEVLSK FVGETEKNVR
301: DLFADAEQDQ RTLGDASELH VIIFDEIDAI CKSRGSTRDG TGVHDSIVNQ LLTKIDGVEA LNNVLLIGMT NRKDLLDEAL LRPGRLEVQV EISLPDEAGR
401: LQILQIHTNK MKENSFLGTD INLQELAART KNYSGAELEG VVKSATSYAL NRQLSMDDLT KPVEEENIKI TMEDFLHAIY EVQPAFGAST DDLERCRLNG
501: MVDCGHRHNH IYKRAMLLVE QVKVSTRSPL VTCLLEGPSG SGKTALAATI GIDSDFPYVK IVSAETMIGL SESTKCAHIV KVFEDAYKSP MSIIILDDIE
601: RLLEFIAIGP RFSNIISQTL MVLLKRLPPK GKKLLVFGTT SEVTFLESVG ISDCFSVTHS VPTLQKEDAK KVLNQLNLFS EDDVDSAAEA LNDMPIKKIY
701: MLIEMAAQGE NGGSAEAIYA GREKININHF YDCLGDFIRF TG

Arabidopsis Description

NSFNSF [Source:UniProtKB/TrEMBL;Acc:A0A178UTB9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.