CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P26190_001	Banana	cytosol	18.8	26.04
KRH50033	Soybean	endoplasmic reticulum, nucleus	63.25	19.84
KRH20460	Soybean	endoplasmic reticulum	62.82	19.81
Solyc01g104920.2.1	Tomato	plastid	54.27	18.35
GSMUA_Achr9P05850_001	Banana	cytosol	56.41	17.77
Bra000808.1-P	Field mustard	cytosol	53.85	17.65
CDY21320	Canola	plastid	53.85	17.65
GSMUA_Achr8P27650_001	Banana	cytosol	55.56	17.4
VIT_19s0014g02750.t01	Wine grape	cytosol	54.7	17.32
CDX90880	Canola	plastid	53.85	17.19
TraesCS1A01G339900.1	Wheat	unclear	54.7	17.14
EER93779	Sorghum	cytosol	54.27	17.09
TraesCS1B01G352200.2	Wheat	cytosol, mitochondrion	54.27	17.09
TraesCS1D01G341900.2	Wheat	cytosol	54.27	17.05
Zm00001d038808_P001	Maize	cytosol	53.85	17.0
Bra029529.1-P	Field mustard	plastid	53.42	16.98
CDX86132	Canola	plastid	52.99	16.8
Zm00001d051286_P013	Maize	cytosol	54.27	16.71
Os05t0519400-01	Rice	plasma membrane	52.99	16.69
Bra033538.1-P	Field mustard	cytosol	46.58	16.64
CDY16637	Canola	plastid	52.14	16.53
AT4G04910.1	Thale cress	plastid	52.14	16.44
PGSC0003DMT400076472	Potato	cytosol	54.27	16.08
HORVU1Hr1G076180.22	Barley	cytosol	54.27	15.97
CDY34435	Canola	cytosol	48.29	15.44
CDY32219	Canola	cytosol	47.01	14.91
CDY09518	Canola	cytosol	29.06	14.85
CDY39223	Canola	cytosol, mitochondrion	6.84	14.04
Zm00001d000156_P001	Maize	cytosol	24.79	13.62
Solyc01g104930.1.1	Tomato	cytosol	8.55	10.93
PGSC0003DMT400076471	Potato	cytosol	6.84	8.25
KRH29644	Soybean	nucleus	18.38	3.6
KRH24642	Soybean	cytosol, nucleus	18.38	3.58
KRH27288	Soybean	nucleus	18.8	2.42
KRH22028	Soybean	nucleus	19.23	2.41

Protein Annotations

EMBL:ACUP02007178	EnsemblPlants:KRH24495	EnsemblPlantsGene:GLYMA_12G044800	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	InterPro:ATPase_AAA_core	InterPro:P-loop_NTPase	PANTHER:PTHR23078	PANTHER:PTHR23078:SF11	PFAM:PF00004
ProteinID:KRH24495	ProteinID:KRH24495.1	SUPFAM:SSF52540	UniParc:UPI0006ED9401	UniProt:A0A0R0HDX2	MapMan:35.1

Description

hypothetical protein

Coordinates

chr12:-:3258721..3263850

Molecular Weight (calculated)

26572.2 Da

IEP (calculated)

7.528

GRAVY (calculated)

-0.159

Length

234 amino acids

Sequence
(BLAST)

001: MDNLVHATGN IFKQKEFNLE SLGIKHVKGM LLYGPPRTGK TLMAEIENSF LAADVNLQEL DDLTKQVEEE NIKVTMDDFL NALHEVTSAL GASTDDHERC
101: SLHDIVECAK SMIGLHESTK CAQIIKVFEY SYKSPLSVII LDDIERLLEY VPIGPRFSNL ISQTLLVLLK RFPPKVCIHP RSFSSFLKHI GYKFKSRTNR
201: NRSGFSGCVK IYCHATLLCQ WANQNLSYDF QTVK

Best Arabidopsis Sequence Match ( AT4G04910.1 )
(BLAST)

001: MAGRYGSQVM TMTVTNTPSA DLAFTNLAYC SSSDLRQFSV PGSDLFLANV ADSFILSLCG HGSIRDGNIA LNAIQRRHAR VSTGDMVSVS RFVPPENFDL
101: AMLTLELEFV KKGTKSEQVD AALLSTQLKR KYTNQVLTVG QKATFEYHGT NYILTVNRAD VEGQDHTNGI ERGLLSKDTY IVFEASNASG IKIVNQREAA
201: SSNIFKHKEF NLESLGIGGL GAEFADIFRR AFASRVFPPH VTSRLGIKHV KGMLLFGPPG TGKTLMARQI GKMLNGKDPK IVNGPEVLSK FVGETEKNVR
301: DLFADAEQDQ RTLGDASELH VIIFDEIDAI CKSRGSTRDG TGVHDSIVNQ LLTKIDGVEA LNNVLLIGMT NRKDLLDEAL LRPGRLEVQV EISLPDEAGR
401: LQILQIHTNK MKENSFLGTD INLQELAART KNYSGAELEG VVKSATSYAL NRQLSMDDLT KPVEEENIKI TMEDFLHAIY EVQPAFGAST DDLERCRLNG
501: MVDCGHRHNH IYKRAMLLVE QVKVSTRSPL VTCLLEGPSG SGKTALAATI GIDSDFPYVK IVSAETMIGL SESTKCAHIV KVFEDAYKSP MSIIILDDIE
601: RLLEFIAIGP RFSNIISQTL MVLLKRLPPK GKKLLVFGTT SEVTFLESVG ISDCFSVTHS VPTLQKEDAK KVLNQLNLFS EDDVDSAAEA LNDMPIKKIY
701: MLIEMAAQGE NGGSAEAIYA GREKININHF YDCLGDFIRF TG

Arabidopsis Description

NSFNSF [Source:UniProtKB/TrEMBL;Acc:A0A178UTB9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.