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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plastid 5
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
EpiLoc:cytosol
iPSORT:plastid
MultiLoc:nucleus
Plant-mPloc:nucleus
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:nucleus
YLoc:cytosol
nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH22028 Soybean nucleus 84.35 82.05
Solyc07g062760.1.1 Tomato nucleus 27.55 45.29
VIT_19s0014g02080.t01 Wine grape cytosol, plastid 47.38 44.93
PGSC0003DMT400032278 Potato cytosol, mitochondrion, nucleus 44.02 43.49
Zm00001d043928_P001 Maize cytosol, nucleus, plastid 21.93 43.36
CDX75809 Canola nucleus 41.54 40.91
CDX82447 Canola nucleus 41.1 40.63
Bra001584.1-P Field mustard nucleus 41.1 39.41
OQU87303 Sorghum cytosol 36.2 38.97
GSMUA_Achr1P13870_001 Banana nucleus, plastid 37.85 38.81
AT3G15120.2 Thale cress cytosol 41.32 38.19
TraesCS3A01G246500.2 Wheat cytosol 37.69 37.13
HORVU3Hr1G061240.1 Barley cytosol 37.58 37.07
TraesCS3B01G272900.1 Wheat cytosol 37.8 37.06
Zm00001d043927_P001 Maize plastid 36.91 36.61
TraesCS3D01G245000.1 Wheat cytosol 37.58 33.83
KRH24642 Soybean cytosol, nucleus 13.83 20.9
KRH29644 Soybean nucleus 13.72 20.82
KRH20460 Soybean endoplasmic reticulum 7.82 19.14
KRH24495 Soybean cytosol 2.42 18.8
KRH50033 Soybean endoplasmic reticulum, nucleus 7.71 18.77
Protein Annotations
Gene3D:1.10.8.60MapMan:14.3.1.1Gene3D:3.30.40.10Gene3D:3.40.50.300InterPro:AAA+_ATPaseEMBL:ACUP02007798
InterPro:ATPase_AAA_coreInterPro:EPHDEnsemblPlantsGene:GLYMA_12G227000GO:GO:0000166GO:GO:0003674GO:GO:0003682
GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0016043GO:GO:0016787GO:GO:0016887GO:GO:0031936GO:GO:0040029
GO:GO:0042393GO:GO:0045944GO:GO:0046872InterPro:IPR013083InterPro:IPR034732UniProt:K7LWF1
EnsemblPlants:KRH27288ProteinID:KRH27288ProteinID:KRH27288.1InterPro:P-loop_NTPasePFAM:PF00004PFAM:PF13771
PFscan:PS51805PANTHER:PTHR23069PANTHER:PTHR23069:SF3SMART:SM00382SUPFAM:SSF52540UniParc:UPI000295AC69
InterPro:Znf_RING/FYVE/PHDSEG:seg::::
Description
hypothetical protein
Coordinates
chr12:+:38689090..38697428
Molecular Weight (calculated)
200707.0 Da
IEP (calculated)
6.179
GRAVY (calculated)
-0.473
Length
1815 amino acids
Sequence
(BLAST)
0001: MWGFVEAPGF AVPPVLLDAS PAPPKKRRKV GKGGISRSVE GARRLGRKNK GSGGTWSSRL RSRVGNVGVR VKEETESPRG KRKLFEGMVR RRGDREVGRK
0101: EELGGLMPKV VKSKRPGRIK ATKHEEGHEE DVSDGSLEES KSQEVEIVLS SGEESDSDSE TESCGGDRMD DSDGNTSPVI GNEEGNLMDD SDGDVSPMIR
0201: NEEGDQMDDL DGNDPLMVGN EEKNLPNDLQ IEECGGNAEP SPVEHLVKVD DQLESAKESK RVGDVAEQVD NKGSVGKEVD VNENVLKDAN DGKEADVDEN
0301: VLKDANVGRL DELKHASVDK RGHQRIKEGR RCGLCGGGSD GKPPKRLAQD NGESENEAYS GSSSSEETNY DIWDGFDDEP AWLGRLLGPI NDHCGIARIW
0401: VHLHCAVWSP EVYFANFGCL KNVRAALFRG RALKCTRCGR RGATTGCRVD RCPRTYHLPC ARASGCIFDH RKFLIACTDH RHLFQPCGNK YLSWIKKLKA
0501: RKMMWEIRKR SNEACRKDIG DEERWLENCG EDEEFLKREN KRLHRDLLRI APVYIGGSES ASENSFQGWE SVAGLKDVIC CMKEVVILPL LYPELFDNLG
0601: LTPPRGVLLH GHPGTGKTLV VRALIGACSR GDKRVAYFAR KGADCLGKYV GDAERQLRLL FQVAEKCQPS IIFFDEIDGL APCRTRQQDQ THSSVVSTLL
0701: ALMDGLKSRG SVVVIGATNC PESVDPALRR PGRFDREIYF PLPSIEDRAS ILSLHTQKWP KPITGSLLEW IARKTSGFAG ADLQALCTQA AMNALKRNFP
0801: LQEVLSLAAE EKHSGSKHIP LPSFAVEERD WLEAYFSSPL PCSRRDAGNA ANDVVCYPLP IQLIPCLLQP LCTLLVSLYL DERLWLPLPI SKAATVIKDV
0901: MISALDKKQK PSDHWWLHMD DFLQETNIVY ELKRNLTCSG ILSANDGIAG SFDTVDDANN NSLKFESSTR NHLGMHSGLC ALTNKSGFRI LISGNSRSGQ
1001: RHLASSLLHC FIGNIEVQKI DMATILQEGH GVVVQGIGQI LMKCASRQSC IVFLPRIDLW AVEKHFQIAE RIDSCLTMGK SCFTPNEVVQ KENDISNEKN
1101: STEMTKGQAN TKASYAWMSF IEQVESIDVS TSLMILATSE VPYTELPCKV REFFKSYQSK DGRSTPLEQT IPRFSVQIDE NFDHDMVINL SALELLRIVV
1201: EQLVQLIHQR SHVHMGSQKG RSYKSIEVSK DKEVCQRKED GPANDKREIQ LESFTKVPPT PNSKSMKGKS ILLLAISTFG YQILLYPHFT ELCWVTSKLD
1301: EGPCTDVSGP WRGWPFNSCI IRPNNSHDQV AVSCSSGGTK SREASGLVRG LIAVGLSAYR GVYKSVREVS LDVRKVLEIL IEKINTRIQA GKDRYQYFRI
1401: LSQVAYLEDM VNNWAYSLLS LEQDSPEHKI KAIPASGGPL NSHLTHENHQ TEGEDCHLVV PVDGNDLETL EGSQKEIPAE TTGCLASDDK NDNADIFDCD
1501: DGNASSEGHL QNHSFSDKNI NNSIAASQPL YPSTSQENGI LFGQSEFVTA GNNEEMDGEL GISKGLNKST CTQSVVPSEN GLHTACEPKK HDVEIGNIRS
1601: DQPLSLPSVE TGAKSSDVKS DKQENAPDSN VSSSNGCGPA ESGVICLYQC CPACLHSLHH LTKKILVEKW GLNSDKWTAE DVHDAVASLS VDLISAVRKC
1701: FMPEDFIDSS NKTSRNEKRG TSLDCLKLST CNNGNQRKDV VPAECVSHSA SQHATAMEGM VLNEESSKHD LKFVFRDGVL VHLDPDKDVS VHCKFENLCL
1801: CSLRELIVMK KRPFD
Best Arabidopsis Sequence Match ( AT3G15120.2 )
(BLAST)
0001: MKSSHEVTKN HSGSPSGKKS KKLAAICEEE YKKNHGESQD RDGGSGLACA DSELRRSSRV RKIPSILDAS PPPPKKRQRF NKSSSSIEKG KRNEDGDSDA
0101: PDGWKSRLRS RRKKNVGFQA SGRQRRVVKG KRKLVFRNRA CELSEKAEAS DREEEKGALK GGKLNKAKKP VDVKESESSE DGGKESDTSN SEDVQKESDT
0201: SNSEDESASE SEESMQADSA AREKYQEKKA TKRSVFLESE NEAEVDRTET ESEDGTDSTD NEIDDSDEEG ESETQCSAEK TGSETEANVE EMRADTNVTM
0301: EAVQNESRNQ MEELENEIEM GVEDEKKEMS VIVSESGNGT GIREDENKEM DVIVSESGNG TGILEGENKK MEVMVSGSGN GTGIREDDSD FAAKVKNREG
0401: DTLHPELLGE ASTEINESLK QNDDIGEQGV SRTPSNNKTK EHNEFLDRGG ESVEMPDELP IQNETCKKAV DSVSTSSDRL GKPLFKQTRR CGLCGVGTDG
0501: KLPKKLMQDN GDSDVEAPSG SSSSEEQKYD ILDGFGDDPG WLGRLLGPIN DRYGISGTWV HQNCAVWSPE VYFAGVGCLK NIRAALFRGR SLKCTRCDRP
0601: GATTGCRVDR CPRTYHLPCA RANGCIFDHR KFLIACTDHR HHFQPHGRQC QVRMTKMKTK RMRLEMKKHS NDAWRKDVEA EEKWFEKCGE DEEFLKRESK
0701: RLHRDLLRVA PEYIGGSDSE SGKAFEGWDS VAGLEGVTQC MKEVVLIPLL YPEFFDNLGL TPPRGILLHG HPGTGKTLVV RALIGSLARG NRRIAYFARK
0801: GADCLGKYVG DAERQLRLLF QVAEKCQPSI IFFDEIDGLA PKRSRQQDQT HSSVVSTLLA LLDGLKSRGS VVVIGATNYP DAIDPALRRP GRFDREIYFP
0901: LPSVDDRAAI ISLHTRKWPK PVSGYLLKWI AKETAGFAGA DIQALCTQAA MIALNRSFPL QESLAAAELG VSSSNRAALP SFSVEERDWL EALSRSPPPC
1001: SRRGAGIAAS DIFSSPLPTY LVPSLLPPLC SLLVALHLDE RIFLPPLLSK AAVDVQNVIR SALSDKKITE GCWWSHVDTL LHEVDVVKDI VQRLSCTGIL
1101: DGGCDLVGSV ASIPGTGDCS LGSAKFMVPR VCRHPGVLGN ASVESTSKSG FQLLIAGGPK SGQRHLASCV LHCFIGNAEM LKIDTATISQ EGNGDLVLGV
1201: THLLIKCASK KSCVVFMPRV DLWAVKTETP LNEEVECDDD SVQENCSEMG EEKALQNGVR VSHAWNTFFE QVETLRVSTK MMILATSGMP YKLLPPKIQQ
1301: FFKTDLSKEC QPTMSEAVPQ FNVQVVESSD QDIAIDLSAT ELLRRAIQVF LHLVHQGSHT HCGLKKKYKG EDLDQGCRDA APQNNTDHRA GEEAVVKSKR
1401: LDDGSLKVPP LPININVKPK SSLQLAVSTF GYQILQYPQF AELCWVTSKL KEGPSADVSG PWRGWPFNSC ITRPCNSSEQ TITSSDSNNV KGKDSTGIVR
1501: GLTAVGLSAY RGTYISLREV SFEVRKVLEL LVGRISVKIN AGKDRCRYIR ILSQVAYLED LVNSWVYAMR SFESTTQTES TNPLPCSVVN PSVRNEPTEQ
1601: GTSDQLKGSE EDLKEDTQNM NCPDPIASSN LTDNHQPVVE IANGHNGTNH ESFLEDTGHL TTHSTDGLTL VKENVDVISD TEMMIEDSGV NPFRQAVLLD
1701: LNSPAADHEQ NETPHGSCEV ETTGTVISLQ EKADSLDNPN GSGDSNSISL EDPHKSADSN NGKAWDGVHG LESANNMPEP VEQVETTGRT NPQDDPSLVC
1801: LYRCCSQCVS ILQDSMHKLV TRELRLGRSS ITTEGIHDAV SSLSVELISA VRKFISVKNN GTMQEAKVKD HEECPENEAC FCKRLSGNFL ASVECCSHSA
1901: EMQGSLDEGN TYRRPKTWLE PVFVFKDGIL VPVSTEDDRS LHCKYDSFCL GSLIELIATE MKPF
Arabidopsis Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LIM2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.