Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G246500.2 | Wheat | cytosol | 95.46 | 95.93 |
| HORVU3Hr1G061240.1 | Barley | cytosol | 93.03 | 93.59 |
| TraesCS3D01G245000.1 | Wheat | cytosol | 97.78 | 89.78 |
| OQU87303 | Sorghum | cytosol | 61.86 | 67.91 |
| Zm00001d043927_P001 | Maize | plastid | 63.91 | 64.64 |
| Zm00001d043928_P001 | Maize | cytosol, nucleus, plastid | 28.63 | 57.73 |
| GSMUA_Achr1P13870_001 | Banana | nucleus, plastid | 44.14 | 46.16 |
| Solyc07g062760.1.1 | Tomato | nucleus | 25.93 | 43.48 |
| KRH22028 | Soybean | nucleus | 38.84 | 38.53 |
| PGSC0003DMT400032278 | Potato | cytosol, mitochondrion, nucleus | 38.09 | 38.38 |
| CDX75809 | Canola | nucleus | 38.14 | 38.31 |
| CDX82447 | Canola | nucleus | 37.98 | 38.29 |
| VIT_19s0014g02080.t01 | Wine grape | cytosol, plastid | 39.33 | 38.04 |
| KRH27288 | Soybean | nucleus | 37.06 | 37.8 |
| Bra001584.1-P | Field mustard | nucleus | 36.63 | 35.82 |
| AT3G15120.2 | Thale cress | cytosol | 37.44 | 35.29 |
| TraesCS5B01G299500.1 | Wheat | nucleus | 13.45 | 20.7 |
| TraesCS1B01G352200.2 | Wheat | cytosol, mitochondrion | 7.02 | 17.5 |
Protein Annotations
| Gene3D:1.10.8.60 | MapMan:14.3.1.1 | Gene3D:3.30.40.10 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_CS |
| InterPro:ATPase_AAA_core | InterPro:EPHD | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 |
| InterPro:IPR013083 | InterPro:IPR034732 | InterPro:P-loop_NTPase | PFAM:PF00004 | PFAM:PF13771 | ScanProsite:PS00674 |
| PFscan:PS51805 | PANTHER:PTHR23069 | PANTHER:PTHR23069:SF3 | SMART:SM00382 | SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS3B01G272900 |
| EnsemblPlants:TraesCS3B01G272900.1 | InterPro:Znf_RING/FYVE/PHD | TIGR:cd00009 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr3B:+:439446723..439455376
Molecular Weight (calculated)
202539.0 Da
IEP (calculated)
6.063
GRAVY (calculated)
-0.434
Length
1851 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPPSMPKRRR GVAASPRCRK KQKRLDAICD VAPTPPPGGG GGGGGGGEDS DPESVRRSTR SRRAPVTLDT SPAPSPRRMR PRRGGGVAGP SGSPRTGGKG
0101: RARGQAVARA VDGEEDEEDG GGNAAWRSRL RDRAKGKAGA GRRVRTLWFQ DEDEDEEGIK EEGGEESGGL SSRGREIREG EINLTIDVSV QTHEAVEGVT
0201: VVEEEGEEKG AGEEGDECDE EEEAIGVGTD LDEGNMEEVG EDDSLQGEEK PEQLDLPVLE GENGDENTDE VEFGDLGENE QLDVHHGQIA EVSNLPDEQP
0301: MELDGPDEQV EEVQQDEQMD DAPNIALPEE ALNERVGKSL ISDEKRGVVD VKEGRRCGLC GGGTDGRPPK VALHDTADSE NEAYEGAMPS EEPNYDIWDG
0401: FSDDPGWLGR LLGPIHDRFG IARVWVHQNC AVWSPEVYFA GLGCLKNVRA ALCRGRLLKC SRCGRPGATI GCRVDRCPKT YHLPCSRTEA CIFDHRKFLI
0501: TCNDHRHLFQ PQGDKYAELL RKMKIKKMKA NIRKLSHDAW RKDIEAEEKW LENCGEDEEF LKREGKRLNR DLLRIAPVYI GGSSENDKAY GGWESVAGLS
0601: DVIQSMKEVV ILPLLYPEFF SSLGLTPPRG VLLHGHPGTG KTLVVRALIG ACSQGNRRIA YFARKGADCL GKYVGDAERQ LRLLFQVAEK CQPSIIFFDE
0701: MDGLAPCRSR QQDQTHNSVV ATLLSLLDGL KSRGSVIVIG ATNRPDAIDP ALRRPGRFDR EIYFPLPTLE ARSAILSLHT KNWPSPISGT FLSAVASQTI
0801: GYAGADLQAI CTQAALNALK RTCPLQDILR FAEKGTEHGR LPLPSITVEE RDWLSALAAA PPPCSQREAG IAANDLVSAP IDSYLLPCLL KPLLHLLISL
0901: CLDERIWLPS SLLKASSSIK AVVFSSMEKN NVPHTFWSSY LPSLIQQKDV GNKIVSILSS YGLTASQLGN HGSMLLSQNK QHEKFDDRKL SSTCSLNKGG
1001: LAYKLAGFRA LVAGAPRSGQ QHLVHCLLHG FVGQTVIHKL DLATMAQEGN GDILNGLTQI LLKGLHLGRC IIYMPRIDLW AVNTVHEQET EDHGRNMGTS
1101: KLASSPVESM PKCSEVWNTL VDQMGSLSAS VSISVLATSE LKFQDLPCGV KHFFSTHVVD QCLSSSEHTV PRFSVNVDSS ISWDEVLNSC ALRLSHDLIQ
1201: HHVQLLHGRA HNNHDEQKEV FVPMEISAPD ESKSCENQES IILAKSSLYV DKRPSYPTKL ATCSAQLQPS ASDVKDKEED PEKLDFHESV SRNPSSRTMK
1301: GNESLSIIAF GIQILQHPQF SKLCWVTSKL REGPCTDING PWKGWPFNSC LLHSSTSSVK SLSEGHSVVK GKEKSLCVRG LVAVGLLAYR GVYASVMEVC
1401: AEVRKVLELL VEQIRIKILE KKSRYRYFHI LSQVAYLDDI VNSWAYTFQR LHPDTRTRAL GTETASLGKS CTRECESTSY ATESNVLAGP VGGFPHVQDN
1501: SAQQSHDHLV GPASCPSEMH DKPVQQGPDQ LEIHSVVCNI GNDHLTSISR MDAVEHDLLC SASPDAHKGA LTSADPVIND GGSGEVNNGW KMSRVTNGKE
1601: KCKPDIQRSE SLSKSVEDFN NMQRAENLSA CPATMDSVEV SKKTMSSESH GSGNELNTSF PLNDVGSGHS INGQMQDRRN NLSVPKSSCL YECCSSCFRA
1701: VYKVSHDILS NSVRSNKHCL TVDDMHDILS SCSLNLLATV RKWHSSQGVV GCQEEIGKKR YLEIISEHCV CQGDVSSVSR DCACHLESSA EAEASNKERH
1801: SLCGQSLSFF FKDGVLMPQD LTAGTTLHCS FKRLCVCSLP GTISMLVQIP S
0101: RARGQAVARA VDGEEDEEDG GGNAAWRSRL RDRAKGKAGA GRRVRTLWFQ DEDEDEEGIK EEGGEESGGL SSRGREIREG EINLTIDVSV QTHEAVEGVT
0201: VVEEEGEEKG AGEEGDECDE EEEAIGVGTD LDEGNMEEVG EDDSLQGEEK PEQLDLPVLE GENGDENTDE VEFGDLGENE QLDVHHGQIA EVSNLPDEQP
0301: MELDGPDEQV EEVQQDEQMD DAPNIALPEE ALNERVGKSL ISDEKRGVVD VKEGRRCGLC GGGTDGRPPK VALHDTADSE NEAYEGAMPS EEPNYDIWDG
0401: FSDDPGWLGR LLGPIHDRFG IARVWVHQNC AVWSPEVYFA GLGCLKNVRA ALCRGRLLKC SRCGRPGATI GCRVDRCPKT YHLPCSRTEA CIFDHRKFLI
0501: TCNDHRHLFQ PQGDKYAELL RKMKIKKMKA NIRKLSHDAW RKDIEAEEKW LENCGEDEEF LKREGKRLNR DLLRIAPVYI GGSSENDKAY GGWESVAGLS
0601: DVIQSMKEVV ILPLLYPEFF SSLGLTPPRG VLLHGHPGTG KTLVVRALIG ACSQGNRRIA YFARKGADCL GKYVGDAERQ LRLLFQVAEK CQPSIIFFDE
0701: MDGLAPCRSR QQDQTHNSVV ATLLSLLDGL KSRGSVIVIG ATNRPDAIDP ALRRPGRFDR EIYFPLPTLE ARSAILSLHT KNWPSPISGT FLSAVASQTI
0801: GYAGADLQAI CTQAALNALK RTCPLQDILR FAEKGTEHGR LPLPSITVEE RDWLSALAAA PPPCSQREAG IAANDLVSAP IDSYLLPCLL KPLLHLLISL
0901: CLDERIWLPS SLLKASSSIK AVVFSSMEKN NVPHTFWSSY LPSLIQQKDV GNKIVSILSS YGLTASQLGN HGSMLLSQNK QHEKFDDRKL SSTCSLNKGG
1001: LAYKLAGFRA LVAGAPRSGQ QHLVHCLLHG FVGQTVIHKL DLATMAQEGN GDILNGLTQI LLKGLHLGRC IIYMPRIDLW AVNTVHEQET EDHGRNMGTS
1101: KLASSPVESM PKCSEVWNTL VDQMGSLSAS VSISVLATSE LKFQDLPCGV KHFFSTHVVD QCLSSSEHTV PRFSVNVDSS ISWDEVLNSC ALRLSHDLIQ
1201: HHVQLLHGRA HNNHDEQKEV FVPMEISAPD ESKSCENQES IILAKSSLYV DKRPSYPTKL ATCSAQLQPS ASDVKDKEED PEKLDFHESV SRNPSSRTMK
1301: GNESLSIIAF GIQILQHPQF SKLCWVTSKL REGPCTDING PWKGWPFNSC LLHSSTSSVK SLSEGHSVVK GKEKSLCVRG LVAVGLLAYR GVYASVMEVC
1401: AEVRKVLELL VEQIRIKILE KKSRYRYFHI LSQVAYLDDI VNSWAYTFQR LHPDTRTRAL GTETASLGKS CTRECESTSY ATESNVLAGP VGGFPHVQDN
1501: SAQQSHDHLV GPASCPSEMH DKPVQQGPDQ LEIHSVVCNI GNDHLTSISR MDAVEHDLLC SASPDAHKGA LTSADPVIND GGSGEVNNGW KMSRVTNGKE
1601: KCKPDIQRSE SLSKSVEDFN NMQRAENLSA CPATMDSVEV SKKTMSSESH GSGNELNTSF PLNDVGSGHS INGQMQDRRN NLSVPKSSCL YECCSSCFRA
1701: VYKVSHDILS NSVRSNKHCL TVDDMHDILS SCSLNLLATV RKWHSSQGVV GCQEEIGKKR YLEIISEHCV CQGDVSSVSR DCACHLESSA EAEASNKERH
1801: SLCGQSLSFF FKDGVLMPQD LTAGTTLHCS FKRLCVCSLP GTISMLVQIP S
0001: MKSSHEVTKN HSGSPSGKKS KKLAAICEEE YKKNHGESQD RDGGSGLACA DSELRRSSRV RKIPSILDAS PPPPKKRQRF NKSSSSIEKG KRNEDGDSDA
0101: PDGWKSRLRS RRKKNVGFQA SGRQRRVVKG KRKLVFRNRA CELSEKAEAS DREEEKGALK GGKLNKAKKP VDVKESESSE DGGKESDTSN SEDVQKESDT
0201: SNSEDESASE SEESMQADSA AREKYQEKKA TKRSVFLESE NEAEVDRTET ESEDGTDSTD NEIDDSDEEG ESETQCSAEK TGSETEANVE EMRADTNVTM
0301: EAVQNESRNQ MEELENEIEM GVEDEKKEMS VIVSESGNGT GIREDENKEM DVIVSESGNG TGILEGENKK MEVMVSGSGN GTGIREDDSD FAAKVKNREG
0401: DTLHPELLGE ASTEINESLK QNDDIGEQGV SRTPSNNKTK EHNEFLDRGG ESVEMPDELP IQNETCKKAV DSVSTSSDRL GKPLFKQTRR CGLCGVGTDG
0501: KLPKKLMQDN GDSDVEAPSG SSSSEEQKYD ILDGFGDDPG WLGRLLGPIN DRYGISGTWV HQNCAVWSPE VYFAGVGCLK NIRAALFRGR SLKCTRCDRP
0601: GATTGCRVDR CPRTYHLPCA RANGCIFDHR KFLIACTDHR HHFQPHGRQC QVRMTKMKTK RMRLEMKKHS NDAWRKDVEA EEKWFEKCGE DEEFLKRESK
0701: RLHRDLLRVA PEYIGGSDSE SGKAFEGWDS VAGLEGVTQC MKEVVLIPLL YPEFFDNLGL TPPRGILLHG HPGTGKTLVV RALIGSLARG NRRIAYFARK
0801: GADCLGKYVG DAERQLRLLF QVAEKCQPSI IFFDEIDGLA PKRSRQQDQT HSSVVSTLLA LLDGLKSRGS VVVIGATNYP DAIDPALRRP GRFDREIYFP
0901: LPSVDDRAAI ISLHTRKWPK PVSGYLLKWI AKETAGFAGA DIQALCTQAA MIALNRSFPL QESLAAAELG VSSSNRAALP SFSVEERDWL EALSRSPPPC
1001: SRRGAGIAAS DIFSSPLPTY LVPSLLPPLC SLLVALHLDE RIFLPPLLSK AAVDVQNVIR SALSDKKITE GCWWSHVDTL LHEVDVVKDI VQRLSCTGIL
1101: DGGCDLVGSV ASIPGTGDCS LGSAKFMVPR VCRHPGVLGN ASVESTSKSG FQLLIAGGPK SGQRHLASCV LHCFIGNAEM LKIDTATISQ EGNGDLVLGV
1201: THLLIKCASK KSCVVFMPRV DLWAVKTETP LNEEVECDDD SVQENCSEMG EEKALQNGVR VSHAWNTFFE QVETLRVSTK MMILATSGMP YKLLPPKIQQ
1301: FFKTDLSKEC QPTMSEAVPQ FNVQVVESSD QDIAIDLSAT ELLRRAIQVF LHLVHQGSHT HCGLKKKYKG EDLDQGCRDA APQNNTDHRA GEEAVVKSKR
1401: LDDGSLKVPP LPININVKPK SSLQLAVSTF GYQILQYPQF AELCWVTSKL KEGPSADVSG PWRGWPFNSC ITRPCNSSEQ TITSSDSNNV KGKDSTGIVR
1501: GLTAVGLSAY RGTYISLREV SFEVRKVLEL LVGRISVKIN AGKDRCRYIR ILSQVAYLED LVNSWVYAMR SFESTTQTES TNPLPCSVVN PSVRNEPTEQ
1601: GTSDQLKGSE EDLKEDTQNM NCPDPIASSN LTDNHQPVVE IANGHNGTNH ESFLEDTGHL TTHSTDGLTL VKENVDVISD TEMMIEDSGV NPFRQAVLLD
1701: LNSPAADHEQ NETPHGSCEV ETTGTVISLQ EKADSLDNPN GSGDSNSISL EDPHKSADSN NGKAWDGVHG LESANNMPEP VEQVETTGRT NPQDDPSLVC
1801: LYRCCSQCVS ILQDSMHKLV TRELRLGRSS ITTEGIHDAV SSLSVELISA VRKFISVKNN GTMQEAKVKD HEECPENEAC FCKRLSGNFL ASVECCSHSA
1901: EMQGSLDEGN TYRRPKTWLE PVFVFKDGIL VPVSTEDDRS LHCKYDSFCL GSLIELIATE MKPF
0101: PDGWKSRLRS RRKKNVGFQA SGRQRRVVKG KRKLVFRNRA CELSEKAEAS DREEEKGALK GGKLNKAKKP VDVKESESSE DGGKESDTSN SEDVQKESDT
0201: SNSEDESASE SEESMQADSA AREKYQEKKA TKRSVFLESE NEAEVDRTET ESEDGTDSTD NEIDDSDEEG ESETQCSAEK TGSETEANVE EMRADTNVTM
0301: EAVQNESRNQ MEELENEIEM GVEDEKKEMS VIVSESGNGT GIREDENKEM DVIVSESGNG TGILEGENKK MEVMVSGSGN GTGIREDDSD FAAKVKNREG
0401: DTLHPELLGE ASTEINESLK QNDDIGEQGV SRTPSNNKTK EHNEFLDRGG ESVEMPDELP IQNETCKKAV DSVSTSSDRL GKPLFKQTRR CGLCGVGTDG
0501: KLPKKLMQDN GDSDVEAPSG SSSSEEQKYD ILDGFGDDPG WLGRLLGPIN DRYGISGTWV HQNCAVWSPE VYFAGVGCLK NIRAALFRGR SLKCTRCDRP
0601: GATTGCRVDR CPRTYHLPCA RANGCIFDHR KFLIACTDHR HHFQPHGRQC QVRMTKMKTK RMRLEMKKHS NDAWRKDVEA EEKWFEKCGE DEEFLKRESK
0701: RLHRDLLRVA PEYIGGSDSE SGKAFEGWDS VAGLEGVTQC MKEVVLIPLL YPEFFDNLGL TPPRGILLHG HPGTGKTLVV RALIGSLARG NRRIAYFARK
0801: GADCLGKYVG DAERQLRLLF QVAEKCQPSI IFFDEIDGLA PKRSRQQDQT HSSVVSTLLA LLDGLKSRGS VVVIGATNYP DAIDPALRRP GRFDREIYFP
0901: LPSVDDRAAI ISLHTRKWPK PVSGYLLKWI AKETAGFAGA DIQALCTQAA MIALNRSFPL QESLAAAELG VSSSNRAALP SFSVEERDWL EALSRSPPPC
1001: SRRGAGIAAS DIFSSPLPTY LVPSLLPPLC SLLVALHLDE RIFLPPLLSK AAVDVQNVIR SALSDKKITE GCWWSHVDTL LHEVDVVKDI VQRLSCTGIL
1101: DGGCDLVGSV ASIPGTGDCS LGSAKFMVPR VCRHPGVLGN ASVESTSKSG FQLLIAGGPK SGQRHLASCV LHCFIGNAEM LKIDTATISQ EGNGDLVLGV
1201: THLLIKCASK KSCVVFMPRV DLWAVKTETP LNEEVECDDD SVQENCSEMG EEKALQNGVR VSHAWNTFFE QVETLRVSTK MMILATSGMP YKLLPPKIQQ
1301: FFKTDLSKEC QPTMSEAVPQ FNVQVVESSD QDIAIDLSAT ELLRRAIQVF LHLVHQGSHT HCGLKKKYKG EDLDQGCRDA APQNNTDHRA GEEAVVKSKR
1401: LDDGSLKVPP LPININVKPK SSLQLAVSTF GYQILQYPQF AELCWVTSKL KEGPSADVSG PWRGWPFNSC ITRPCNSSEQ TITSSDSNNV KGKDSTGIVR
1501: GLTAVGLSAY RGTYISLREV SFEVRKVLEL LVGRISVKIN AGKDRCRYIR ILSQVAYLED LVNSWVYAMR SFESTTQTES TNPLPCSVVN PSVRNEPTEQ
1601: GTSDQLKGSE EDLKEDTQNM NCPDPIASSN LTDNHQPVVE IANGHNGTNH ESFLEDTGHL TTHSTDGLTL VKENVDVISD TEMMIEDSGV NPFRQAVLLD
1701: LNSPAADHEQ NETPHGSCEV ETTGTVISLQ EKADSLDNPN GSGDSNSISL EDPHKSADSN NGKAWDGVHG LESANNMPEP VEQVETTGRT NPQDDPSLVC
1801: LYRCCSQCVS ILQDSMHKLV TRELRLGRSS ITTEGIHDAV SSLSVELISA VRKFISVKNN GTMQEAKVKD HEECPENEAC FCKRLSGNFL ASVECCSHSA
1901: EMQGSLDEGN TYRRPKTWLE PVFVFKDGIL VPVSTEDDRS LHCKYDSFCL GSLIELIATE MKPF
Arabidopsis Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LIM2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.