Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g062760.1.1 | Tomato | nucleus | 49.86 | 82.97 |
| VIT_19s0014g02080.t01 | Wine grape | cytosol, plastid | 49.05 | 47.07 |
| Zm00001d043928_P001 | Maize | cytosol, nucleus, plastid | 22.37 | 44.77 |
| KRH22028 | Soybean | nucleus | 45.07 | 44.37 |
| KRH27288 | Soybean | nucleus | 43.49 | 44.02 |
| CDX82447 | Canola | nucleus | 40.66 | 40.69 |
| GSMUA_Achr1P13870_001 | Banana | nucleus, plastid | 39.19 | 40.68 |
| CDX75809 | Canola | nucleus | 40.72 | 40.59 |
| Bra001584.1-P | Field mustard | nucleus | 40.66 | 39.46 |
| OQU87303 | Sorghum | cytosol | 35.82 | 39.03 |
| HORVU3Hr1G061240.1 | Barley | cytosol | 38.43 | 38.37 |
| TraesCS3B01G272900.1 | Wheat | cytosol | 38.38 | 38.09 |
| TraesCS3A01G246500.2 | Wheat | cytosol | 38.05 | 37.95 |
| AT3G15120.2 | Thale cress | cytosol | 40.45 | 37.83 |
| Zm00001d043927_P001 | Maize | plastid | 36.91 | 37.05 |
| TraesCS3D01G245000.1 | Wheat | cytosol | 38.32 | 34.92 |
| PGSC0003DMT400076472 | Potato | cytosol | 7.73 | 17.97 |
| PGSC0003DMT400076471 | Potato | cytosol | 1.47 | 13.92 |
Protein Annotations
| Gene3D:1.10.8.60 | EntrezGene:102599159 | MapMan:14.3.1.1 | Gene3D:3.30.40.10 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase |
| InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | InterPro:EPHD | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0046872 | InterPro:IPR013083 | InterPro:IPR034732 | UniProt:M1AX52 | InterPro:P-loop_NTPase |
| PFAM:PF00004 | PFAM:PF13771 | EnsemblPlantsGene:PGSC0003DMG400012401 | PGSC:PGSC0003DMG400012401 | EnsemblPlants:PGSC0003DMT400032278 | ScanProsite:PS00674 |
| PFscan:PS51805 | PANTHER:PTHR23069 | PANTHER:PTHR23069:SF3 | SMART:SM00382 | SUPFAM:SSF52540 | UniParc:UPI0002949459 |
| RefSeq:XP_006348278.1 | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : |
Description
26S proteasome subunit 4 [Source:PGSC_GENE;Acc:PGSC0003DMG400012401]
Coordinates
chr7:+:52936408..52946185
Molecular Weight (calculated)
204254.0 Da
IEP (calculated)
6.091
GRAVY (calculated)
-0.451
Length
1837 amino acids
Sequence
(BLAST)
(BLAST)
0001: MRFSRIASVE RSRTDTKLVY SRARKKHKRL DEVCEETYNQ NHNGVDKVET SESNGEESEV ELRRSSRVRK APVVLDASPP PARKRQKIDR SGVRSGSRLE
0101: KGDVVKVESP CSTSNHLEEG TSSWGLRLRA RSKRTTNRVR NSVDSSPVGK RKIFQDVDEL KEETELEVGE LDKEEDSECE KSTIVKSKRP GRIKASNVMV
0201: TEQQETGTGG GVEDGKMVDQ EELLHVRDET DDGISTTRFK EGVEDGNAAL PLDNEDNAQL ETCVEPEECH ATDQVSMLEQ DLQRRNEVSV GVIDQKDGVE
0301: GGLLPNDEKD GGTEKQAEDE VDRIDYAQEK DGGTEEQAED EVDRVDYAQE KDEGVFSDKA LEMEKVVKKE CASDSTLRKR RIREGRHCGL CGGGTDGKPP
0401: KKLVYGAATD DEAHSGSSAS DEPNYDMWDG FGDEPGWLGR LLGPINDRYG IAGIWVHQQC AVWSPEVYFA GLGCLKNVRA ALCRGRVLKC SRCGRPGATI
0501: GCRVDRCPKT YHLPCARANG CIFDHRKFLI ACTDHRHLFQ PYGSNYLQRI KKLKARKMKF ELRKLSNDAL RKDVDAEEKW LENCGEDEEF LKRESKRLHR
0601: DLLRIAPVYI GGSNSDAGVQ FQGWDSVAGL QDVIQCMKEV VILPLLYPEL FSSLGLTPPR GVLLHGYPGT GKTLIVRALI GSCARGDKRI AYFARKGADC
0701: LGKYVGDAER QLRLLFQVAE KSQPSVIFFD EIDGLAPCRG RQQDQTHSSV VSTLLALMDG LKSRGSVVVI GATNRPDAVD PALRRPGRFD REIYFPLPSV
0801: KDRESILSLH TKKWPKPVSG PVLKWIASKT VGFAGADLQA LCTQAAIIAL KRSFPLHKRL SAVVKVPNAA CPPLPNFKVE ERDWVEALTC APPPCSRREA
0901: GMAANDVVSA PLHTFLVPCL LQPLSRLIVS LYLDERLWLP PLLFKAAEFV KDVVLSAMVE KKLPSNNWQS YVNDLLQEPD VISQIENHFV RANILDGDAN
1001: IGGFDAVDDG NVHGLSNSQP SKLQWAGARP KLLKNIFHMA GKKSGFRILI SGNPRSGQRH LASSLLHCFV GNVDVQKVDL ATISQEGHGD VIQGLTQILM
1101: RCASVEKCMI FMPRVDLWAM ETSDLVCQED GCSLLNPESL GKDEERSFNH SADQAGDALK RASYLWSSFV EQVESICMAT SVMLLATSDV PLEALPVRVR
1201: QFFKSQPLNS SIPFPLEDSV SRFSEQLDRN FDQECLIDSS AAMLSKDIAQ HFIQLIHRTN HVHLQTCNDE ASDKSEGNAA IECQRSDLRS TIEPVNKQCP
1301: LPTSAIANSR NVKGKSNLML AITTFGYQIL RYPHFAELCW FTSKLREGPC VDINGPWKGW PFNSCVIRPI ISTGNVTLPP NNNKGKEKYC MVRGLIAIGL
1401: LAYRGKYSSV REVSAEVRKV LELLVEQIND KIRNGRDRYQ FVRLLSQVAY LDDMVNSWVY SLQSLGGDSQ LAEANPKIGC AGLPESADAP ENTPLREGGC
1501: ELEEPLDKAE TLETCRPELT AENCTPANPE ANGVSNFPDI GAVEHEPLHL VAVNHSAPSR QVTCSVHSVL NDNSCMPDDT DKHLGNIGDC VLKRQSNGLM
1601: ELNIDDVQED GSNYSKDSCG IEHSNYTLSS NSNGRLTTLN NLQIGDSNQK SVGNSIGLEC SNISSNLSTD SSIVCLYRCC PQCLLNLQRT LKKMLSYEWG
1701: LKKAEFIVED AYDFLASLAA NLHSALRVWL LADDSTSFDE KRVQERYSES FECKQTNLCE CRNLENRLIK LIECNCHLKS SVQTEKCKSS QNLSQEFIFR
1801: DGVLTNLDEK DVSTHCKFET LCLCSLVEWI VMRKKTT
0101: KGDVVKVESP CSTSNHLEEG TSSWGLRLRA RSKRTTNRVR NSVDSSPVGK RKIFQDVDEL KEETELEVGE LDKEEDSECE KSTIVKSKRP GRIKASNVMV
0201: TEQQETGTGG GVEDGKMVDQ EELLHVRDET DDGISTTRFK EGVEDGNAAL PLDNEDNAQL ETCVEPEECH ATDQVSMLEQ DLQRRNEVSV GVIDQKDGVE
0301: GGLLPNDEKD GGTEKQAEDE VDRIDYAQEK DGGTEEQAED EVDRVDYAQE KDEGVFSDKA LEMEKVVKKE CASDSTLRKR RIREGRHCGL CGGGTDGKPP
0401: KKLVYGAATD DEAHSGSSAS DEPNYDMWDG FGDEPGWLGR LLGPINDRYG IAGIWVHQQC AVWSPEVYFA GLGCLKNVRA ALCRGRVLKC SRCGRPGATI
0501: GCRVDRCPKT YHLPCARANG CIFDHRKFLI ACTDHRHLFQ PYGSNYLQRI KKLKARKMKF ELRKLSNDAL RKDVDAEEKW LENCGEDEEF LKRESKRLHR
0601: DLLRIAPVYI GGSNSDAGVQ FQGWDSVAGL QDVIQCMKEV VILPLLYPEL FSSLGLTPPR GVLLHGYPGT GKTLIVRALI GSCARGDKRI AYFARKGADC
0701: LGKYVGDAER QLRLLFQVAE KSQPSVIFFD EIDGLAPCRG RQQDQTHSSV VSTLLALMDG LKSRGSVVVI GATNRPDAVD PALRRPGRFD REIYFPLPSV
0801: KDRESILSLH TKKWPKPVSG PVLKWIASKT VGFAGADLQA LCTQAAIIAL KRSFPLHKRL SAVVKVPNAA CPPLPNFKVE ERDWVEALTC APPPCSRREA
0901: GMAANDVVSA PLHTFLVPCL LQPLSRLIVS LYLDERLWLP PLLFKAAEFV KDVVLSAMVE KKLPSNNWQS YVNDLLQEPD VISQIENHFV RANILDGDAN
1001: IGGFDAVDDG NVHGLSNSQP SKLQWAGARP KLLKNIFHMA GKKSGFRILI SGNPRSGQRH LASSLLHCFV GNVDVQKVDL ATISQEGHGD VIQGLTQILM
1101: RCASVEKCMI FMPRVDLWAM ETSDLVCQED GCSLLNPESL GKDEERSFNH SADQAGDALK RASYLWSSFV EQVESICMAT SVMLLATSDV PLEALPVRVR
1201: QFFKSQPLNS SIPFPLEDSV SRFSEQLDRN FDQECLIDSS AAMLSKDIAQ HFIQLIHRTN HVHLQTCNDE ASDKSEGNAA IECQRSDLRS TIEPVNKQCP
1301: LPTSAIANSR NVKGKSNLML AITTFGYQIL RYPHFAELCW FTSKLREGPC VDINGPWKGW PFNSCVIRPI ISTGNVTLPP NNNKGKEKYC MVRGLIAIGL
1401: LAYRGKYSSV REVSAEVRKV LELLVEQIND KIRNGRDRYQ FVRLLSQVAY LDDMVNSWVY SLQSLGGDSQ LAEANPKIGC AGLPESADAP ENTPLREGGC
1501: ELEEPLDKAE TLETCRPELT AENCTPANPE ANGVSNFPDI GAVEHEPLHL VAVNHSAPSR QVTCSVHSVL NDNSCMPDDT DKHLGNIGDC VLKRQSNGLM
1601: ELNIDDVQED GSNYSKDSCG IEHSNYTLSS NSNGRLTTLN NLQIGDSNQK SVGNSIGLEC SNISSNLSTD SSIVCLYRCC PQCLLNLQRT LKKMLSYEWG
1701: LKKAEFIVED AYDFLASLAA NLHSALRVWL LADDSTSFDE KRVQERYSES FECKQTNLCE CRNLENRLIK LIECNCHLKS SVQTEKCKSS QNLSQEFIFR
1801: DGVLTNLDEK DVSTHCKFET LCLCSLVEWI VMRKKTT
0001: MKSSHEVTKN HSGSPSGKKS KKLAAICEEE YKKNHGESQD RDGGSGLACA DSELRRSSRV RKIPSILDAS PPPPKKRQRF NKSSSSIEKG KRNEDGDSDA
0101: PDGWKSRLRS RRKKNVGFQA SGRQRRVVKG KRKLVFRNRA CELSEKAEAS DREEEKGALK GGKLNKAKKP VDVKESESSE DGGKESDTSN SEDVQKESDT
0201: SNSEDESASE SEESMQADSA AREKYQEKKA TKRSVFLESE NEAEVDRTET ESEDGTDSTD NEIDDSDEEG ESETQCSAEK TGSETEANVE EMRADTNVTM
0301: EAVQNESRNQ MEELENEIEM GVEDEKKEMS VIVSESGNGT GIREDENKEM DVIVSESGNG TGILEGENKK MEVMVSGSGN GTGIREDDSD FAAKVKNREG
0401: DTLHPELLGE ASTEINESLK QNDDIGEQGV SRTPSNNKTK EHNEFLDRGG ESVEMPDELP IQNETCKKAV DSVSTSSDRL GKPLFKQTRR CGLCGVGTDG
0501: KLPKKLMQDN GDSDVEAPSG SSSSEEQKYD ILDGFGDDPG WLGRLLGPIN DRYGISGTWV HQNCAVWSPE VYFAGVGCLK NIRAALFRGR SLKCTRCDRP
0601: GATTGCRVDR CPRTYHLPCA RANGCIFDHR KFLIACTDHR HHFQPHGRQC QVRMTKMKTK RMRLEMKKHS NDAWRKDVEA EEKWFEKCGE DEEFLKRESK
0701: RLHRDLLRVA PEYIGGSDSE SGKAFEGWDS VAGLEGVTQC MKEVVLIPLL YPEFFDNLGL TPPRGILLHG HPGTGKTLVV RALIGSLARG NRRIAYFARK
0801: GADCLGKYVG DAERQLRLLF QVAEKCQPSI IFFDEIDGLA PKRSRQQDQT HSSVVSTLLA LLDGLKSRGS VVVIGATNYP DAIDPALRRP GRFDREIYFP
0901: LPSVDDRAAI ISLHTRKWPK PVSGYLLKWI AKETAGFAGA DIQALCTQAA MIALNRSFPL QESLAAAELG VSSSNRAALP SFSVEERDWL EALSRSPPPC
1001: SRRGAGIAAS DIFSSPLPTY LVPSLLPPLC SLLVALHLDE RIFLPPLLSK AAVDVQNVIR SALSDKKITE GCWWSHVDTL LHEVDVVKDI VQRLSCTGIL
1101: DGGCDLVGSV ASIPGTGDCS LGSAKFMVPR VCRHPGVLGN ASVESTSKSG FQLLIAGGPK SGQRHLASCV LHCFIGNAEM LKIDTATISQ EGNGDLVLGV
1201: THLLIKCASK KSCVVFMPRV DLWAVKTETP LNEEVECDDD SVQENCSEMG EEKALQNGVR VSHAWNTFFE QVETLRVSTK MMILATSGMP YKLLPPKIQQ
1301: FFKTDLSKEC QPTMSEAVPQ FNVQVVESSD QDIAIDLSAT ELLRRAIQVF LHLVHQGSHT HCGLKKKYKG EDLDQGCRDA APQNNTDHRA GEEAVVKSKR
1401: LDDGSLKVPP LPININVKPK SSLQLAVSTF GYQILQYPQF AELCWVTSKL KEGPSADVSG PWRGWPFNSC ITRPCNSSEQ TITSSDSNNV KGKDSTGIVR
1501: GLTAVGLSAY RGTYISLREV SFEVRKVLEL LVGRISVKIN AGKDRCRYIR ILSQVAYLED LVNSWVYAMR SFESTTQTES TNPLPCSVVN PSVRNEPTEQ
1601: GTSDQLKGSE EDLKEDTQNM NCPDPIASSN LTDNHQPVVE IANGHNGTNH ESFLEDTGHL TTHSTDGLTL VKENVDVISD TEMMIEDSGV NPFRQAVLLD
1701: LNSPAADHEQ NETPHGSCEV ETTGTVISLQ EKADSLDNPN GSGDSNSISL EDPHKSADSN NGKAWDGVHG LESANNMPEP VEQVETTGRT NPQDDPSLVC
1801: LYRCCSQCVS ILQDSMHKLV TRELRLGRSS ITTEGIHDAV SSLSVELISA VRKFISVKNN GTMQEAKVKD HEECPENEAC FCKRLSGNFL ASVECCSHSA
1901: EMQGSLDEGN TYRRPKTWLE PVFVFKDGIL VPVSTEDDRS LHCKYDSFCL GSLIELIATE MKPF
0101: PDGWKSRLRS RRKKNVGFQA SGRQRRVVKG KRKLVFRNRA CELSEKAEAS DREEEKGALK GGKLNKAKKP VDVKESESSE DGGKESDTSN SEDVQKESDT
0201: SNSEDESASE SEESMQADSA AREKYQEKKA TKRSVFLESE NEAEVDRTET ESEDGTDSTD NEIDDSDEEG ESETQCSAEK TGSETEANVE EMRADTNVTM
0301: EAVQNESRNQ MEELENEIEM GVEDEKKEMS VIVSESGNGT GIREDENKEM DVIVSESGNG TGILEGENKK MEVMVSGSGN GTGIREDDSD FAAKVKNREG
0401: DTLHPELLGE ASTEINESLK QNDDIGEQGV SRTPSNNKTK EHNEFLDRGG ESVEMPDELP IQNETCKKAV DSVSTSSDRL GKPLFKQTRR CGLCGVGTDG
0501: KLPKKLMQDN GDSDVEAPSG SSSSEEQKYD ILDGFGDDPG WLGRLLGPIN DRYGISGTWV HQNCAVWSPE VYFAGVGCLK NIRAALFRGR SLKCTRCDRP
0601: GATTGCRVDR CPRTYHLPCA RANGCIFDHR KFLIACTDHR HHFQPHGRQC QVRMTKMKTK RMRLEMKKHS NDAWRKDVEA EEKWFEKCGE DEEFLKRESK
0701: RLHRDLLRVA PEYIGGSDSE SGKAFEGWDS VAGLEGVTQC MKEVVLIPLL YPEFFDNLGL TPPRGILLHG HPGTGKTLVV RALIGSLARG NRRIAYFARK
0801: GADCLGKYVG DAERQLRLLF QVAEKCQPSI IFFDEIDGLA PKRSRQQDQT HSSVVSTLLA LLDGLKSRGS VVVIGATNYP DAIDPALRRP GRFDREIYFP
0901: LPSVDDRAAI ISLHTRKWPK PVSGYLLKWI AKETAGFAGA DIQALCTQAA MIALNRSFPL QESLAAAELG VSSSNRAALP SFSVEERDWL EALSRSPPPC
1001: SRRGAGIAAS DIFSSPLPTY LVPSLLPPLC SLLVALHLDE RIFLPPLLSK AAVDVQNVIR SALSDKKITE GCWWSHVDTL LHEVDVVKDI VQRLSCTGIL
1101: DGGCDLVGSV ASIPGTGDCS LGSAKFMVPR VCRHPGVLGN ASVESTSKSG FQLLIAGGPK SGQRHLASCV LHCFIGNAEM LKIDTATISQ EGNGDLVLGV
1201: THLLIKCASK KSCVVFMPRV DLWAVKTETP LNEEVECDDD SVQENCSEMG EEKALQNGVR VSHAWNTFFE QVETLRVSTK MMILATSGMP YKLLPPKIQQ
1301: FFKTDLSKEC QPTMSEAVPQ FNVQVVESSD QDIAIDLSAT ELLRRAIQVF LHLVHQGSHT HCGLKKKYKG EDLDQGCRDA APQNNTDHRA GEEAVVKSKR
1401: LDDGSLKVPP LPININVKPK SSLQLAVSTF GYQILQYPQF AELCWVTSKL KEGPSADVSG PWRGWPFNSC ITRPCNSSEQ TITSSDSNNV KGKDSTGIVR
1501: GLTAVGLSAY RGTYISLREV SFEVRKVLEL LVGRISVKIN AGKDRCRYIR ILSQVAYLED LVNSWVYAMR SFESTTQTES TNPLPCSVVN PSVRNEPTEQ
1601: GTSDQLKGSE EDLKEDTQNM NCPDPIASSN LTDNHQPVVE IANGHNGTNH ESFLEDTGHL TTHSTDGLTL VKENVDVISD TEMMIEDSGV NPFRQAVLLD
1701: LNSPAADHEQ NETPHGSCEV ETTGTVISLQ EKADSLDNPN GSGDSNSISL EDPHKSADSN NGKAWDGVHG LESANNMPEP VEQVETTGRT NPQDDPSLVC
1801: LYRCCSQCVS ILQDSMHKLV TRELRLGRSS ITTEGIHDAV SSLSVELISA VRKFISVKNN GTMQEAKVKD HEECPENEAC FCKRLSGNFL ASVECCSHSA
1901: EMQGSLDEGN TYRRPKTWLE PVFVFKDGIL VPVSTEDDRS LHCKYDSFCL GSLIELIATE MKPF
Arabidopsis Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LIM2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.