Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 3
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g062760.1.1 | Tomato | nucleus | 29.1 | 50.45 |
| PGSC0003DMT400032278 | Potato | cytosol, mitochondrion, nucleus | 47.07 | 49.05 |
| KRH22028 | Soybean | nucleus | 46.34 | 47.53 |
| KRH27288 | Soybean | nucleus | 44.93 | 47.38 |
| Zm00001d043928_P001 | Maize | cytosol, nucleus, plastid | 21.89 | 45.64 |
| CDX75809 | Canola | nucleus | 41.43 | 43.03 |
| GSMUA_Achr1P13870_001 | Banana | nucleus, plastid | 39.76 | 42.99 |
| CDX82447 | Canola | nucleus | 41.01 | 42.76 |
| Bra001584.1-P | Field mustard | nucleus | 41.74 | 42.21 |
| OQU87303 | Sorghum | cytosol | 35.53 | 40.33 |
| TraesCS3A01G246500.2 | Wheat | cytosol | 38.19 | 39.69 |
| AT3G15120.2 | Thale cress | cytosol | 40.7 | 39.66 |
| HORVU3Hr1G061240.1 | Barley | cytosol | 37.93 | 39.46 |
| TraesCS3B01G272900.1 | Wheat | cytosol | 38.04 | 39.33 |
| Zm00001d043927_P001 | Maize | plastid | 36.73 | 38.42 |
| TraesCS3D01G245000.1 | Wheat | cytosol | 38.09 | 36.16 |
| VIT_05s0102g00260.t01 | Wine grape | nucleus | 13.43 | 21.1 |
| VIT_19s0014g02750.t01 | Wine grape | cytosol | 6.58 | 17.05 |
Protein Annotations
| Gene3D:1.10.8.60 | EntrezGene:100243511 | wikigene:100243511 | MapMan:14.3.1.1 | Gene3D:3.30.40.10 | Gene3D:3.40.50.300 |
| InterPro:AAA+_ATPase | InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | ProteinID:CCB46307 | ProteinID:CCB46307.1 | ncoils:Coil |
| InterPro:EPHD | UniProt:F6H211 | EMBL:FN595229 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003682 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0031936 | GO:GO:0040029 |
| GO:GO:0042393 | GO:GO:0045944 | GO:GO:0046872 | InterPro:IPR013083 | InterPro:IPR034732 | EntrezGene:LOC100243511 |
| wikigene:LOC100243511 | InterPro:P-loop_NTPase | PFAM:PF00004 | PFAM:PF13771 | ScanProsite:PS00674 | PFscan:PS51805 |
| PANTHER:PTHR23069 | PANTHER:PTHR23069:SF3 | SMART:SM00382 | SUPFAM:SSF52540 | UniParc:UPI0002109A70 | ArrayExpress:VIT_19s0014g02080 |
| EnsemblPlantsGene:VIT_19s0014g02080 | EnsemblPlants:VIT_19s0014g02080.t01 | RefSeq:XP_002282706 | RefSeq:XP_002282706.1 | RefSeq:XP_010644166.1 | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr19:-:2237245..2251081
Molecular Weight (calculated)
211360.0 Da
IEP (calculated)
6.074
GRAVY (calculated)
-0.442
Length
1914 amino acids
Sequence
(BLAST)
(BLAST)
0001: MRLSSGSVSS SKRVKNHRSN SRTRTKHKKL DAICEKTYNR NRGVSGESNE GNGGAGSAGV DSELRRSSRV RRAPVLLDSS PPPSKKRRRI DWNGESFSKR
0101: REKGKAVVRS CSSPGEDSGE LKEGEVWKSR LRSRAKTKRV RFVEKDKEAS ASGKRKLFRD MDGCREEETM VERELDEKKE ELDGGKSTVV RSKRPGRIKA
0201: SNVLGNSEEE IDLQSNKGVE DERVEVEMLV DKGERDFLVL NSEMDGGNEV EAVEGGNEVE AVGNEVEAGV GAVGNEVEAV DGENEVEAIG NEVEAVDGGN
0301: EVEAVDGETA DLLEKEKSEN QNGLSGNDNV ETIEQNDKQM EHPECVNEGE NERDVLEVGV AASQVEDVVD HDGQDACLDN PDEKPVEPEN SMGVDKSNKA
0401: LAYTLGKPRI KEGRRCGLCG GGTDGKPPKR VVQDIGESEN EACSGSSASD EPNYDPWDGF GDEPSWLGRL LGPINDRYGI AGIWIHQHCA VWSPEVYFAG
0501: LGCLKNVRAA LCRGRALKCS RCGRPGATIG CRVDRCPKTY HLPCARANGC IFDHRKFLIA CTDHRHLFQP HGNQYLQQIK KMKAKKMKLE IRKVSNDACR
0601: KDLEAEEKWL EHCGEDEEFL KRESKRLHRD ILRIAPVYIG GPGSEGEKLF QGWESVAGLQ DVIRCLKEVV ILPLLYPEFF NNLGLTPPRG VLLHGYPGTG
0701: KTLVVRALIG SCARGDKRIA YFARKGADCL GKYVGDAERQ LRLLFQVAER SQPSIIFFDE IDGLAPCRTR QQDQTHSSVV STLLALLDGL KSRGSVVVIG
0801: ATNRPEAVDP ALRRPGRFDR EIYFPLPSVK DRISILSLHT QRWPKPVTGP LLNWIARKTA GFAGADLQAL CTQAAIIALK RNCPFQALVS HAGEKAPDRN
0901: RYPLPSFAVE ERDWLEALSC APPPCSRREA GMSANEVVSS PLPTHLISCL LRPLSSLLVS LYLDECLYLP PLLYKAAKMI KNVIVGALRK KKMPNDHWWA
1001: QVNDLLQKAD VIKEIERNLS CLGILIGEAG FPFSDALNDD TDEDRVRFDP SRAYHNGIHT TLLRNISYTS GKKSGFRILI AGSPRSGQRH LASCILHCFV
1101: GNVEIQKVDL ATISQEGRGD VLEGLTRILM KCTSVGSCML FLPRIDLWAI ETSDQDDEEC SSSTDHQSSE EEFCITNSQV VEKENVSGPR ACKSTETGVP
1201: EDVLQRASHA WRSFIEQVDS MCVSTSLIIL ATSDVPYAAL PKRIREFFKT DILNYSCSAS SEHTVPQFSV QVDGNFNRDT LIDSSATELS RDLVQQFVQL
1301: IHHRTHILTS VFEEYKACDT SQGNKDMVYH GADHVLANEG EDRAQCPEES VAKVPSPPNS RTVKGKSNLL LAISTFGYQM LRYPHFAELC WVTSKLKDGP
1401: CADINGPWKG WPFNSCIIRP SNSLEKVAVA CSPSNTKSKE KFGLVRGLVA VGLSAYRGAY VSLREVSLEV RKVLELLVDQ INAKIQSGKD RYEFGRILSQ
1501: VACLEDMVNS WVYTLQSLEV DGQMTVVNPK PGTVGSSSYA CGDDVDNLIE SKECGPNVSN RSSHEEVPEE RPEGFTSENT GFVNLHKGDV NSGDPNLKEG
1601: VPLSEKSPLQ TAFLTDSAPV EQFQSSLAAN FLDGKVPNMH DGTSKSFKSE NSVKCMVNKG DSGLWRQSNG FAFVEPVVHS EDSLCSAGEL SGLKLSSCGK
1701: FCNQFNGLSM AETDIPPPDG KSIPDEPIVN VNVSSIKTTN IAADSGVICL YRCCAECLYT LHSLMQKILI REWEVNGTYW TVEDVHDVVA SLSVDLLSAV
1801: RKNYAAESFG NLFDKKMRQE NHGKLSECQE MSICQCKNSG NRLVMPIECS CHSLNKSLSA KANPSRQLDL KFIYRDGVLV PIDLDKDVSF HCKFETLCLC
1901: SLIEWIVMTK QPFD
0101: REKGKAVVRS CSSPGEDSGE LKEGEVWKSR LRSRAKTKRV RFVEKDKEAS ASGKRKLFRD MDGCREEETM VERELDEKKE ELDGGKSTVV RSKRPGRIKA
0201: SNVLGNSEEE IDLQSNKGVE DERVEVEMLV DKGERDFLVL NSEMDGGNEV EAVEGGNEVE AVGNEVEAGV GAVGNEVEAV DGENEVEAIG NEVEAVDGGN
0301: EVEAVDGETA DLLEKEKSEN QNGLSGNDNV ETIEQNDKQM EHPECVNEGE NERDVLEVGV AASQVEDVVD HDGQDACLDN PDEKPVEPEN SMGVDKSNKA
0401: LAYTLGKPRI KEGRRCGLCG GGTDGKPPKR VVQDIGESEN EACSGSSASD EPNYDPWDGF GDEPSWLGRL LGPINDRYGI AGIWIHQHCA VWSPEVYFAG
0501: LGCLKNVRAA LCRGRALKCS RCGRPGATIG CRVDRCPKTY HLPCARANGC IFDHRKFLIA CTDHRHLFQP HGNQYLQQIK KMKAKKMKLE IRKVSNDACR
0601: KDLEAEEKWL EHCGEDEEFL KRESKRLHRD ILRIAPVYIG GPGSEGEKLF QGWESVAGLQ DVIRCLKEVV ILPLLYPEFF NNLGLTPPRG VLLHGYPGTG
0701: KTLVVRALIG SCARGDKRIA YFARKGADCL GKYVGDAERQ LRLLFQVAER SQPSIIFFDE IDGLAPCRTR QQDQTHSSVV STLLALLDGL KSRGSVVVIG
0801: ATNRPEAVDP ALRRPGRFDR EIYFPLPSVK DRISILSLHT QRWPKPVTGP LLNWIARKTA GFAGADLQAL CTQAAIIALK RNCPFQALVS HAGEKAPDRN
0901: RYPLPSFAVE ERDWLEALSC APPPCSRREA GMSANEVVSS PLPTHLISCL LRPLSSLLVS LYLDECLYLP PLLYKAAKMI KNVIVGALRK KKMPNDHWWA
1001: QVNDLLQKAD VIKEIERNLS CLGILIGEAG FPFSDALNDD TDEDRVRFDP SRAYHNGIHT TLLRNISYTS GKKSGFRILI AGSPRSGQRH LASCILHCFV
1101: GNVEIQKVDL ATISQEGRGD VLEGLTRILM KCTSVGSCML FLPRIDLWAI ETSDQDDEEC SSSTDHQSSE EEFCITNSQV VEKENVSGPR ACKSTETGVP
1201: EDVLQRASHA WRSFIEQVDS MCVSTSLIIL ATSDVPYAAL PKRIREFFKT DILNYSCSAS SEHTVPQFSV QVDGNFNRDT LIDSSATELS RDLVQQFVQL
1301: IHHRTHILTS VFEEYKACDT SQGNKDMVYH GADHVLANEG EDRAQCPEES VAKVPSPPNS RTVKGKSNLL LAISTFGYQM LRYPHFAELC WVTSKLKDGP
1401: CADINGPWKG WPFNSCIIRP SNSLEKVAVA CSPSNTKSKE KFGLVRGLVA VGLSAYRGAY VSLREVSLEV RKVLELLVDQ INAKIQSGKD RYEFGRILSQ
1501: VACLEDMVNS WVYTLQSLEV DGQMTVVNPK PGTVGSSSYA CGDDVDNLIE SKECGPNVSN RSSHEEVPEE RPEGFTSENT GFVNLHKGDV NSGDPNLKEG
1601: VPLSEKSPLQ TAFLTDSAPV EQFQSSLAAN FLDGKVPNMH DGTSKSFKSE NSVKCMVNKG DSGLWRQSNG FAFVEPVVHS EDSLCSAGEL SGLKLSSCGK
1701: FCNQFNGLSM AETDIPPPDG KSIPDEPIVN VNVSSIKTTN IAADSGVICL YRCCAECLYT LHSLMQKILI REWEVNGTYW TVEDVHDVVA SLSVDLLSAV
1801: RKNYAAESFG NLFDKKMRQE NHGKLSECQE MSICQCKNSG NRLVMPIECS CHSLNKSLSA KANPSRQLDL KFIYRDGVLV PIDLDKDVSF HCKFETLCLC
1901: SLIEWIVMTK QPFD
0001: MKSSHEVTKN HSGSPSGKKS KKLAAICEEE YKKNHGESQD RDGGSGLACA DSELRRSSRV RKIPSILDAS PPPPKKRQRF NKSSSSIEKG KRNEDGDSDA
0101: PDGWKSRLRS RRKKNVGFQA SGRQRRVVKG KRKLVFRNRA CELSEKAEAS DREEEKGALK GGKLNKAKKP VDVKESESSE DGGKESDTSN SEDVQKESDT
0201: SNSEDESASE SEESMQADSA AREKYQEKKA TKRSVFLESE NEAEVDRTET ESEDGTDSTD NEIDDSDEEG ESETQCSAEK TGSETEANVE EMRADTNVTM
0301: EAVQNESRNQ MEELENEIEM GVEDEKKEMS VIVSESGNGT GIREDENKEM DVIVSESGNG TGILEGENKK MEVMVSGSGN GTGIREDDSD FAAKVKNREG
0401: DTLHPELLGE ASTEINESLK QNDDIGEQGV SRTPSNNKTK EHNEFLDRGG ESVEMPDELP IQNETCKKAV DSVSTSSDRL GKPLFKQTRR CGLCGVGTDG
0501: KLPKKLMQDN GDSDVEAPSG SSSSEEQKYD ILDGFGDDPG WLGRLLGPIN DRYGISGTWV HQNCAVWSPE VYFAGVGCLK NIRAALFRGR SLKCTRCDRP
0601: GATTGCRVDR CPRTYHLPCA RANGCIFDHR KFLIACTDHR HHFQPHGRQC QVRMTKMKTK RMRLEMKKHS NDAWRKDVEA EEKWFEKCGE DEEFLKRESK
0701: RLHRDLLRVA PEYIGGSDSE SGKAFEGWDS VAGLEGVTQC MKEVVLIPLL YPEFFDNLGL TPPRGILLHG HPGTGKTLVV RALIGSLARG NRRIAYFARK
0801: GADCLGKYVG DAERQLRLLF QVAEKCQPSI IFFDEIDGLA PKRSRQQDQT HSSVVSTLLA LLDGLKSRGS VVVIGATNYP DAIDPALRRP GRFDREIYFP
0901: LPSVDDRAAI ISLHTRKWPK PVSGYLLKWI AKETAGFAGA DIQALCTQAA MIALNRSFPL QESLAAAELG VSSSNRAALP SFSVEERDWL EALSRSPPPC
1001: SRRGAGIAAS DIFSSPLPTY LVPSLLPPLC SLLVALHLDE RIFLPPLLSK AAVDVQNVIR SALSDKKITE GCWWSHVDTL LHEVDVVKDI VQRLSCTGIL
1101: DGGCDLVGSV ASIPGTGDCS LGSAKFMVPR VCRHPGVLGN ASVESTSKSG FQLLIAGGPK SGQRHLASCV LHCFIGNAEM LKIDTATISQ EGNGDLVLGV
1201: THLLIKCASK KSCVVFMPRV DLWAVKTETP LNEEVECDDD SVQENCSEMG EEKALQNGVR VSHAWNTFFE QVETLRVSTK MMILATSGMP YKLLPPKIQQ
1301: FFKTDLSKEC QPTMSEAVPQ FNVQVVESSD QDIAIDLSAT ELLRRAIQVF LHLVHQGSHT HCGLKKKYKG EDLDQGCRDA APQNNTDHRA GEEAVVKSKR
1401: LDDGSLKVPP LPININVKPK SSLQLAVSTF GYQILQYPQF AELCWVTSKL KEGPSADVSG PWRGWPFNSC ITRPCNSSEQ TITSSDSNNV KGKDSTGIVR
1501: GLTAVGLSAY RGTYISLREV SFEVRKVLEL LVGRISVKIN AGKDRCRYIR ILSQVAYLED LVNSWVYAMR SFESTTQTES TNPLPCSVVN PSVRNEPTEQ
1601: GTSDQLKGSE EDLKEDTQNM NCPDPIASSN LTDNHQPVVE IANGHNGTNH ESFLEDTGHL TTHSTDGLTL VKENVDVISD TEMMIEDSGV NPFRQAVLLD
1701: LNSPAADHEQ NETPHGSCEV ETTGTVISLQ EKADSLDNPN GSGDSNSISL EDPHKSADSN NGKAWDGVHG LESANNMPEP VEQVETTGRT NPQDDPSLVC
1801: LYRCCSQCVS ILQDSMHKLV TRELRLGRSS ITTEGIHDAV SSLSVELISA VRKFISVKNN GTMQEAKVKD HEECPENEAC FCKRLSGNFL ASVECCSHSA
1901: EMQGSLDEGN TYRRPKTWLE PVFVFKDGIL VPVSTEDDRS LHCKYDSFCL GSLIELIATE MKPF
0101: PDGWKSRLRS RRKKNVGFQA SGRQRRVVKG KRKLVFRNRA CELSEKAEAS DREEEKGALK GGKLNKAKKP VDVKESESSE DGGKESDTSN SEDVQKESDT
0201: SNSEDESASE SEESMQADSA AREKYQEKKA TKRSVFLESE NEAEVDRTET ESEDGTDSTD NEIDDSDEEG ESETQCSAEK TGSETEANVE EMRADTNVTM
0301: EAVQNESRNQ MEELENEIEM GVEDEKKEMS VIVSESGNGT GIREDENKEM DVIVSESGNG TGILEGENKK MEVMVSGSGN GTGIREDDSD FAAKVKNREG
0401: DTLHPELLGE ASTEINESLK QNDDIGEQGV SRTPSNNKTK EHNEFLDRGG ESVEMPDELP IQNETCKKAV DSVSTSSDRL GKPLFKQTRR CGLCGVGTDG
0501: KLPKKLMQDN GDSDVEAPSG SSSSEEQKYD ILDGFGDDPG WLGRLLGPIN DRYGISGTWV HQNCAVWSPE VYFAGVGCLK NIRAALFRGR SLKCTRCDRP
0601: GATTGCRVDR CPRTYHLPCA RANGCIFDHR KFLIACTDHR HHFQPHGRQC QVRMTKMKTK RMRLEMKKHS NDAWRKDVEA EEKWFEKCGE DEEFLKRESK
0701: RLHRDLLRVA PEYIGGSDSE SGKAFEGWDS VAGLEGVTQC MKEVVLIPLL YPEFFDNLGL TPPRGILLHG HPGTGKTLVV RALIGSLARG NRRIAYFARK
0801: GADCLGKYVG DAERQLRLLF QVAEKCQPSI IFFDEIDGLA PKRSRQQDQT HSSVVSTLLA LLDGLKSRGS VVVIGATNYP DAIDPALRRP GRFDREIYFP
0901: LPSVDDRAAI ISLHTRKWPK PVSGYLLKWI AKETAGFAGA DIQALCTQAA MIALNRSFPL QESLAAAELG VSSSNRAALP SFSVEERDWL EALSRSPPPC
1001: SRRGAGIAAS DIFSSPLPTY LVPSLLPPLC SLLVALHLDE RIFLPPLLSK AAVDVQNVIR SALSDKKITE GCWWSHVDTL LHEVDVVKDI VQRLSCTGIL
1101: DGGCDLVGSV ASIPGTGDCS LGSAKFMVPR VCRHPGVLGN ASVESTSKSG FQLLIAGGPK SGQRHLASCV LHCFIGNAEM LKIDTATISQ EGNGDLVLGV
1201: THLLIKCASK KSCVVFMPRV DLWAVKTETP LNEEVECDDD SVQENCSEMG EEKALQNGVR VSHAWNTFFE QVETLRVSTK MMILATSGMP YKLLPPKIQQ
1301: FFKTDLSKEC QPTMSEAVPQ FNVQVVESSD QDIAIDLSAT ELLRRAIQVF LHLVHQGSHT HCGLKKKYKG EDLDQGCRDA APQNNTDHRA GEEAVVKSKR
1401: LDDGSLKVPP LPININVKPK SSLQLAVSTF GYQILQYPQF AELCWVTSKL KEGPSADVSG PWRGWPFNSC ITRPCNSSEQ TITSSDSNNV KGKDSTGIVR
1501: GLTAVGLSAY RGTYISLREV SFEVRKVLEL LVGRISVKIN AGKDRCRYIR ILSQVAYLED LVNSWVYAMR SFESTTQTES TNPLPCSVVN PSVRNEPTEQ
1601: GTSDQLKGSE EDLKEDTQNM NCPDPIASSN LTDNHQPVVE IANGHNGTNH ESFLEDTGHL TTHSTDGLTL VKENVDVISD TEMMIEDSGV NPFRQAVLLD
1701: LNSPAADHEQ NETPHGSCEV ETTGTVISLQ EKADSLDNPN GSGDSNSISL EDPHKSADSN NGKAWDGVHG LESANNMPEP VEQVETTGRT NPQDDPSLVC
1801: LYRCCSQCVS ILQDSMHKLV TRELRLGRSS ITTEGIHDAV SSLSVELISA VRKFISVKNN GTMQEAKVKD HEECPENEAC FCKRLSGNFL ASVECCSHSA
1901: EMQGSLDEGN TYRRPKTWLE PVFVFKDGIL VPVSTEDDRS LHCKYDSFCL GSLIELIATE MKPF
Arabidopsis Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LIM2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.