Factsheet for Bra029529.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
plastid 3
endoplasmic reticulum 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000808.1-P	Field mustard	cytosol	94.57	97.48
CDY16637	Canola	plastid	97.69	97.43
CDX86132	Canola	plastid	96.74	96.48
AT4G04910.1	Thale cress	plastid	93.21	92.45
VIT_19s0014g02750.t01	Wine grape	cytosol	79.76	79.43
KRH50033	Soybean	endoplasmic reticulum, nucleus	78.8	77.75
KRH20460	Soybean	endoplasmic reticulum	77.99	77.36
Bra033538.1-P	Field mustard	cytosol	65.62	73.74
PGSC0003DMT400076472	Potato	cytosol	77.04	71.77
GSMUA_Achr6P26250_001	Banana	cytosol	4.48	71.74
Zm00001d038808_P001	Maize	cytosol	72.15	71.66
EER93779	Sorghum	cytosol	72.28	71.6
Os05t0519400-01	Rice	plasma membrane	72.28	71.6
TraesCS1B01G352200.2	Wheat	cytosol, mitochondrion	70.79	70.12
TraesCS1D01G341900.2	Wheat	cytosol	70.92	70.07
TraesCS1A01G339900.1	Wheat	unclear	70.92	69.88
Zm00001d051286_P013	Maize	cytosol	71.06	68.82
HORVU1Hr1G076180.22	Barley	cytosol	71.2	65.91
PGSC0003DMT400076471	Potato	cytosol	15.9	60.31
KRH24495	Soybean	cytosol	16.98	53.42
Zm00001d000156_P001	Maize	cytosol	17.93	30.99
Bra032449.1-P	Field mustard	nucleus	19.57	11.84
Bra015464.1-P	Field mustard	nucleus	19.29	11.76
Bra001584.1-P	Field mustard	nucleus	16.85	6.55
Solyc07g062770.2.1	Tomato	nucleus	6.39	6.39

Protein Annotations

Gene3D:1.10.8.60	Gene3D:2.40.40.20	Gene3D:3.10.330.10	Gene3D:3.40.50.300	MapMan:50.3.6	InterPro:AAA+_ATPase
InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	InterPro:Asp_de-COase-like_dom_sf	EnsemblPlantsGene:Bra029529	EnsemblPlants:Bra029529.1	EnsemblPlants:Bra029529.1-P
InterPro:CDC48_domain_2-like_sf	InterPro:CDC4_N-term_subdom	InterPro:Cdc48_dom2	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	UniProt:M4EL62	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF02933	ScanProsite:PS00674
PANTHER:PTHR23078	PANTHER:PTHR23078:SF11	SMART:SM00382	SMART:SM01073	SUPFAM:SSF50692	SUPFAM:SSF52540
SUPFAM:SSF54585	UniParc:UPI0002542684	SEG:seg	:	:	:

Description

AT4G04910 (E=0.0) NSF | NSF (N-ethylmaleimide sensitive factor); ATP binding / binding / nucleoside-triphosphatase/ nucleotide binding

Coordinates

chrA09:+:17329220..17334762

Molecular Weight (calculated)

80904.4 Da

IEP (calculated)

5.683

GRAVY (calculated)

-0.109

Length

736 amino acids

Sequence
(BLAST)

001: MAGRSGSQVM TMTVTNTPSA DLAFTNLAYC SSSDLRQFSV PGSDLFLANV ADTFILSLCI RDGSLALNAI QRRHARVSTG DIVSVSRFVP PENFELAMLT
101: LELEFVKKGT KSEQVDAALL STQLKRKYTN QVLTVGQKAT FEYHGTNYIL TVNQADVEGQ NQSNGIERGM LSPDTYIVFE ASNASGIKIV NQREAASSNI
201: FKHKEFNLES LGIGGLGAEF ADIFRRAFAS RVFPPHVTSR LGIKHVKGML LFGPPGTGKT LMARQIGKML NGKDPKIVNG PEVLSKFVGE TEKNVRDLFA
301: DAEQDQRTLG DASELHVIIF DEIDAICKSR GSTRDGTGVH DSIVNQLLTK IDGVEALNNV LLIGMTNRKD LLDEALLRPG RLEVQVEISL PDEAGRFQIL
401: QIHTNKMKEN SFLGHDINLQ ELAARTKNYS GAELEGVVKS ATSYALNRQL SMDDLTKPVE EENIKITMED FLHAIHEVQP AFGASTDDLE RCRLNGMVDS
501: GDRHNHIYKR AMLLVEQVKV STRSPLVTCL LEGPSGSGKT ALAATVGIDS DFPYVKIVSA ETMIGLQEST KCAHIVKVFE DAYKSPMSII ILDDIERLLE
601: YVAIGPRFSN IISQTLMVLL KRLPPKGKKL LVFGTTSQLT FLDSVGICEA FSITYSVPTL RTEDAKKVLK QLNVFSEDDI DAAAEALDDM PIKKLYMLIE
701: MAAQGEDGGS AEAIYAGREK IKITHFFDCL QDVVRF

Best Arabidopsis Sequence Match ( AT4G04910.1 )
(BLAST)

001: MAGRYGSQVM TMTVTNTPSA DLAFTNLAYC SSSDLRQFSV PGSDLFLANV ADSFILSLCG HGSIRDGNIA LNAIQRRHAR VSTGDMVSVS RFVPPENFDL
101: AMLTLELEFV KKGTKSEQVD AALLSTQLKR KYTNQVLTVG QKATFEYHGT NYILTVNRAD VEGQDHTNGI ERGLLSKDTY IVFEASNASG IKIVNQREAA
201: SSNIFKHKEF NLESLGIGGL GAEFADIFRR AFASRVFPPH VTSRLGIKHV KGMLLFGPPG TGKTLMARQI GKMLNGKDPK IVNGPEVLSK FVGETEKNVR
301: DLFADAEQDQ RTLGDASELH VIIFDEIDAI CKSRGSTRDG TGVHDSIVNQ LLTKIDGVEA LNNVLLIGMT NRKDLLDEAL LRPGRLEVQV EISLPDEAGR
401: LQILQIHTNK MKENSFLGTD INLQELAART KNYSGAELEG VVKSATSYAL NRQLSMDDLT KPVEEENIKI TMEDFLHAIY EVQPAFGAST DDLERCRLNG
501: MVDCGHRHNH IYKRAMLLVE QVKVSTRSPL VTCLLEGPSG SGKTALAATI GIDSDFPYVK IVSAETMIGL SESTKCAHIV KVFEDAYKSP MSIIILDDIE
601: RLLEFIAIGP RFSNIISQTL MVLLKRLPPK GKKLLVFGTT SEVTFLESVG ISDCFSVTHS VPTLQKEDAK KVLNQLNLFS EDDVDSAAEA LNDMPIKKIY
701: MLIEMAAQGE NGGSAEAIYA GREKININHF YDCLGDFIRF TG

Arabidopsis Description

NSFNSF [Source:UniProtKB/TrEMBL;Acc:A0A178UTB9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.