Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d038808_P001 | Maize | cytosol | 92.5 | 94.87 |
EER93779 | Sorghum | cytosol | 92.5 | 94.62 |
Os05t0519400-01 | Rice | plasma membrane | 86.58 | 88.56 |
TraesCS1B01G352200.2 | Wheat | cytosol, mitochondrion | 84.47 | 86.41 |
TraesCS1D01G341900.2 | Wheat | cytosol | 84.34 | 86.04 |
TraesCS1A01G339900.1 | Wheat | unclear | 84.47 | 85.94 |
CDY39223 | Canola | cytosol, mitochondrion | 12.5 | 83.33 |
HORVU1Hr1G076180.22 | Barley | cytosol | 84.74 | 81.01 |
Solyc01g104920.2.1 | Tomato | plastid | 69.21 | 76.01 |
GSMUA_Achr8P27650_001 | Banana | cytosol | 74.21 | 75.5 |
GSMUA_Achr9P05850_001 | Banana | cytosol | 73.68 | 75.37 |
VIT_19s0014g02750.t01 | Wine grape | cytosol | 72.11 | 74.15 |
CDY21320 | Canola | plastid | 68.29 | 72.69 |
Bra000808.1-P | Field mustard | cytosol | 68.16 | 72.55 |
KRH50033 | Soybean | endoplasmic reticulum, nucleus | 71.18 | 72.52 |
KRH20460 | Soybean | endoplasmic reticulum | 70.26 | 71.97 |
Bra029529.1-P | Field mustard | plastid | 68.82 | 71.06 |
CDX90880 | Canola | plastid | 68.42 | 70.94 |
CDX86132 | Canola | plastid | 68.55 | 70.6 |
CDY16637 | Canola | plastid | 68.29 | 70.33 |
AT4G04910.1 | Thale cress | plastid | 68.55 | 70.22 |
PGSC0003DMT400076472 | Potato | cytosol | 70.0 | 67.34 |
Bra033538.1-P | Field mustard | cytosol | 56.45 | 65.5 |
CDY34435 | Canola | cytosol | 60.79 | 63.11 |
CDY32219 | Canola | cytosol | 59.61 | 61.38 |
CDY09518 | Canola | cytosol | 34.34 | 56.99 |
Solyc01g104930.1.1 | Tomato | cytosol | 13.16 | 54.64 |
KRH24495 | Soybean | cytosol | 16.71 | 54.27 |
PGSC0003DMT400076471 | Potato | cytosol | 12.63 | 49.48 |
Zm00001d000156_P001 | Maize | cytosol | 21.05 | 37.56 |
Zm00001d016467_P001 | Maize | cytosol | 5.53 | 37.17 |
Zm00001d013148_P001 | Maize | cytosol | 6.58 | 30.67 |
Zm00001d021145_P003 | Maize | plasma membrane | 20.13 | 12.84 |
Zm00001d043928_P001 | Maize | cytosol, nucleus, plastid | 13.68 | 11.33 |
Zm00001d043927_P001 | Maize | plastid | 17.89 | 7.43 |
Protein Annotations
Gene3D:1.10.8.60 | EntrezGene:100193565 | Gene3D:2.40.40.20 | Gene3D:3.10.330.10 | Gene3D:3.40.50.300 | MapMan:50.3.6 |
UniProt:A0A1D6Q604 | InterPro:AAA+_ATPase | ProteinID:AQK53947.1 | InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | InterPro:Asp_de-COase-like_dom_sf |
InterPro:CDC48_domain_2-like_sf | InterPro:Cdc48_dom2 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 |
InterPro:P-loop_NTPase | PFAM:PF00004 | PFAM:PF02933 | ScanProsite:PS00674 | PANTHER:PTHR23078 | PANTHER:PTHR23078:SF11 |
SMART:SM00382 | SUPFAM:SSF50692 | SUPFAM:SSF52540 | SUPFAM:SSF54585 | UniParc:UPI0008456B8C | EnsemblPlantsGene:Zm00001d051286 |
EnsemblPlants:Zm00001d051286_P013 | EnsemblPlants:Zm00001d051286_T013 | SEG:seg | : | : | : |
Description
Vesicle-fusing ATPase
Coordinates
chr4:+:151640870..151648407
Molecular Weight (calculated)
83974.1 Da
IEP (calculated)
6.012
GRAVY (calculated)
-0.100
Length
760 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGRYHQDQG GDGGASMEVV STPNQELALT NCAYVSPADL RRFPNGLALV ADAWVFTLRY PFVDGLRRQA KVSAGDSVTV SSFVPPDDFK LALLTLDLDY
101: AKARANRNDE LDAVVLAQQL RKRFLNQVMT SGQRVPFEFY GTNYVFTVNQ ALLEGQESST PLDRGFLSSD TYIIFEAAPN SGIKVINQKE AASSKLFKHK
201: EFNLEKLGIG GLSAEFTDIF RRAFASRVFP PHVVSKLGIK HVKGILLYGP PGTGKTLMAR QIGKLLNGKD PKIVNGPEVL SKFVGETEKN VRDLFADAEN
301: EQRTRGDQSD LHVIIFDEID AICKSRGSTR DGTGVHDSIV NQLLTKIDGV EALNNVLLIG MTNRKDLLDE ALLRPGRLEV HIEINLPDEN GRLQILQIHT
401: NKMKENSFLS PDINLQELAI TLLMHISTQF YLWKFFMYQM TTEFLNKAAR TKNYSGAELE GVVKSAVSFA LNRQITMDDL TKPLDEESIK VTMDDFVNAL
501: HEITPAFGAS TDDLERCRLR GIVDCGKAHK HIYQRAMLLV EQVKVSKGSP LVTCLLEGPA GSGKTAMAAS VGIDSDFAYV KIISAETMIG FSESSKCAQI
601: CKVFEDAYKS QFSMIILDDI ERLLEYVAIG PRFSNLISQT LLVLLKRVPP KGKNLLVVGT TSEVGFLESV GMCDVFSVTY HVPKLKKEDA KKVLHHLDVF
701: DDGDLDAAAE ALDDMPIKKL YTLVEMAAQG PTGGSAEAIY AGEKIDINHF FSILSDIIRY
101: AKARANRNDE LDAVVLAQQL RKRFLNQVMT SGQRVPFEFY GTNYVFTVNQ ALLEGQESST PLDRGFLSSD TYIIFEAAPN SGIKVINQKE AASSKLFKHK
201: EFNLEKLGIG GLSAEFTDIF RRAFASRVFP PHVVSKLGIK HVKGILLYGP PGTGKTLMAR QIGKLLNGKD PKIVNGPEVL SKFVGETEKN VRDLFADAEN
301: EQRTRGDQSD LHVIIFDEID AICKSRGSTR DGTGVHDSIV NQLLTKIDGV EALNNVLLIG MTNRKDLLDE ALLRPGRLEV HIEINLPDEN GRLQILQIHT
401: NKMKENSFLS PDINLQELAI TLLMHISTQF YLWKFFMYQM TTEFLNKAAR TKNYSGAELE GVVKSAVSFA LNRQITMDDL TKPLDEESIK VTMDDFVNAL
501: HEITPAFGAS TDDLERCRLR GIVDCGKAHK HIYQRAMLLV EQVKVSKGSP LVTCLLEGPA GSGKTAMAAS VGIDSDFAYV KIISAETMIG FSESSKCAQI
601: CKVFEDAYKS QFSMIILDDI ERLLEYVAIG PRFSNLISQT LLVLLKRVPP KGKNLLVVGT TSEVGFLESV GMCDVFSVTY HVPKLKKEDA KKVLHHLDVF
701: DDGDLDAAAE ALDDMPIKKL YTLVEMAAQG PTGGSAEAIY AGEKIDINHF FSILSDIIRY
001: MAGRYGSQVM TMTVTNTPSA DLAFTNLAYC SSSDLRQFSV PGSDLFLANV ADSFILSLCG HGSIRDGNIA LNAIQRRHAR VSTGDMVSVS RFVPPENFDL
101: AMLTLELEFV KKGTKSEQVD AALLSTQLKR KYTNQVLTVG QKATFEYHGT NYILTVNRAD VEGQDHTNGI ERGLLSKDTY IVFEASNASG IKIVNQREAA
201: SSNIFKHKEF NLESLGIGGL GAEFADIFRR AFASRVFPPH VTSRLGIKHV KGMLLFGPPG TGKTLMARQI GKMLNGKDPK IVNGPEVLSK FVGETEKNVR
301: DLFADAEQDQ RTLGDASELH VIIFDEIDAI CKSRGSTRDG TGVHDSIVNQ LLTKIDGVEA LNNVLLIGMT NRKDLLDEAL LRPGRLEVQV EISLPDEAGR
401: LQILQIHTNK MKENSFLGTD INLQELAART KNYSGAELEG VVKSATSYAL NRQLSMDDLT KPVEEENIKI TMEDFLHAIY EVQPAFGAST DDLERCRLNG
501: MVDCGHRHNH IYKRAMLLVE QVKVSTRSPL VTCLLEGPSG SGKTALAATI GIDSDFPYVK IVSAETMIGL SESTKCAHIV KVFEDAYKSP MSIIILDDIE
601: RLLEFIAIGP RFSNIISQTL MVLLKRLPPK GKKLLVFGTT SEVTFLESVG ISDCFSVTHS VPTLQKEDAK KVLNQLNLFS EDDVDSAAEA LNDMPIKKIY
701: MLIEMAAQGE NGGSAEAIYA GREKININHF YDCLGDFIRF TG
101: AMLTLELEFV KKGTKSEQVD AALLSTQLKR KYTNQVLTVG QKATFEYHGT NYILTVNRAD VEGQDHTNGI ERGLLSKDTY IVFEASNASG IKIVNQREAA
201: SSNIFKHKEF NLESLGIGGL GAEFADIFRR AFASRVFPPH VTSRLGIKHV KGMLLFGPPG TGKTLMARQI GKMLNGKDPK IVNGPEVLSK FVGETEKNVR
301: DLFADAEQDQ RTLGDASELH VIIFDEIDAI CKSRGSTRDG TGVHDSIVNQ LLTKIDGVEA LNNVLLIGMT NRKDLLDEAL LRPGRLEVQV EISLPDEAGR
401: LQILQIHTNK MKENSFLGTD INLQELAART KNYSGAELEG VVKSATSYAL NRQLSMDDLT KPVEEENIKI TMEDFLHAIY EVQPAFGAST DDLERCRLNG
501: MVDCGHRHNH IYKRAMLLVE QVKVSTRSPL VTCLLEGPSG SGKTALAATI GIDSDFPYVK IVSAETMIGL SESTKCAHIV KVFEDAYKSP MSIIILDDIE
601: RLLEFIAIGP RFSNIISQTL MVLLKRLPPK GKKLLVFGTT SEVTFLESVG ISDCFSVTHS VPTLQKEDAK KVLNQLNLFS EDDVDSAAEA LNDMPIKKIY
701: MLIEMAAQGE NGGSAEAIYA GREKININHF YDCLGDFIRF TG
Arabidopsis Description
NSFNSF [Source:UniProtKB/TrEMBL;Acc:A0A178UTB9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.