Factsheet for GSMUA_Achr6P26250_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
endoplasmic reticulum 2
mitochondrion 1
extracellular 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P26190_001	Banana	cytosol	65.22	17.75
GSMUA_Achr9P05850_001	Banana	cytosol	78.26	4.85
GSMUA_Achr8P27650_001	Banana	cytosol	78.26	4.82
Bra000808.1-P	Field mustard	cytosol	71.74	4.62
CDY21320	Canola	plastid	71.74	4.62
CDX90880	Canola	plastid	71.74	4.5
Bra029529.1-P	Field mustard	plastid	71.74	4.48
CDX86132	Canola	plastid	71.74	4.47
CDY16637	Canola	plastid	71.74	4.47
Bra033538.1-P	Field mustard	cytosol	63.04	4.43
AT4G04910.1	Thale cress	plastid	67.39	4.18
CDY34435	Canola	cytosol	63.04	3.96
CDY32219	Canola	cytosol	63.04	3.93
GSMUA_Achr10P...	Banana	nucleus	17.39	0.74
CDY09518	Canola	cytosol	6.52	0.66
GSMUA_Achr11P...	Banana	nucleus	15.22	0.59
GSMUA_Achr1P13870_001	Banana	nucleus, plastid	13.04	0.34
CDY39223	Canola	cytosol, mitochondrion	0.0	0.0
Solyc07g062770.2.1	Tomato	nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr6P26250_001	EnsemblPlants:GSMUA_Achr6T26250_001	EnsemblPlantsGene:GSMUA_Achr6G26250_001	PANTHER:PTHR23078	PANTHER:PTHR23078:SF11	SEG:seg
UniParc:UPI000295A840	UniProt:M0TAC0	MapMan:35.2	:	:	:

Description

Vesicle-fusing ATPase [Source:GMGC_GENE;Acc:GSMUA_Achr6G26250_001]

Coordinates

chr6:-:27080945..27082099

Molecular Weight (calculated)

5332.7 Da

IEP (calculated)

8.218

GRAVY (calculated)

0.441

Length

46 amino acids

Sequence
(BLAST)

1: MVRVPCKCAQ IVKVFEDANK SQLSIIILDD IERLLEYVVI GPRFRI

Best Arabidopsis Sequence Match ( AT4G04910.1 )
(BLAST)

001: MAGRYGSQVM TMTVTNTPSA DLAFTNLAYC SSSDLRQFSV PGSDLFLANV ADSFILSLCG HGSIRDGNIA LNAIQRRHAR VSTGDMVSVS RFVPPENFDL
101: AMLTLELEFV KKGTKSEQVD AALLSTQLKR KYTNQVLTVG QKATFEYHGT NYILTVNRAD VEGQDHTNGI ERGLLSKDTY IVFEASNASG IKIVNQREAA
201: SSNIFKHKEF NLESLGIGGL GAEFADIFRR AFASRVFPPH VTSRLGIKHV KGMLLFGPPG TGKTLMARQI GKMLNGKDPK IVNGPEVLSK FVGETEKNVR
301: DLFADAEQDQ RTLGDASELH VIIFDEIDAI CKSRGSTRDG TGVHDSIVNQ LLTKIDGVEA LNNVLLIGMT NRKDLLDEAL LRPGRLEVQV EISLPDEAGR
401: LQILQIHTNK MKENSFLGTD INLQELAART KNYSGAELEG VVKSATSYAL NRQLSMDDLT KPVEEENIKI TMEDFLHAIY EVQPAFGAST DDLERCRLNG
501: MVDCGHRHNH IYKRAMLLVE QVKVSTRSPL VTCLLEGPSG SGKTALAATI GIDSDFPYVK IVSAETMIGL SESTKCAHIV KVFEDAYKSP MSIIILDDIE
601: RLLEFIAIGP RFSNIISQTL MVLLKRLPPK GKKLLVFGTT SEVTFLESVG ISDCFSVTHS VPTLQKEDAK KVLNQLNLFS EDDVDSAAEA LNDMPIKKIY
701: MLIEMAAQGE NGGSAEAIYA GREKININHF YDCLGDFIRF TG

Arabidopsis Description

NSFNSF [Source:UniProtKB/TrEMBL;Acc:A0A178UTB9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.