Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d013148_P001 | Maize | cytosol | 5.69 | 4.29 |
| CDY39223 | Canola | cytosol, mitochondrion | 3.25 | 3.51 |
| CDY09518 | Canola | cytosol | 12.2 | 3.28 |
| CDY21320 | Canola | plastid | 15.45 | 2.66 |
| Zm00001d016467_P001 | Maize | cytosol | 2.44 | 2.65 |
| CDX90880 | Canola | plastid | 15.45 | 2.59 |
| CDY16637 | Canola | plastid | 15.45 | 2.57 |
| CDX86132 | Canola | plastid | 15.45 | 2.57 |
| CDY32219 | Canola | cytosol | 14.63 | 2.44 |
| CDY34435 | Canola | cytosol | 13.82 | 2.32 |
| CDY47705 | Canola | nucleus | 16.26 | 1.68 |
| CDY10163 | Canola | nucleus | 16.26 | 1.68 |
| CDY10003 | Canola | nucleus | 16.26 | 1.67 |
| CDY06186 | Canola | nucleus | 16.26 | 1.67 |
| Os01t0668200-00 | Rice | nucleus | 6.5 | 1.44 |
| CDX75809 | Canola | nucleus | 17.89 | 1.19 |
| CDX82447 | Canola | nucleus | 17.07 | 1.14 |
| Os01t0668300-01 | Rice | cytosol | 8.13 | 1.06 |
Protein Annotations
| EnsemblPlants:CDX96221 | EnsemblPlantsGene:GSBRNA2T00102326001 | ProteinID:CDX96221 | ProteinID:CDX96221.1 | SEG:seg | UniParc:UPI0004EE8763 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC02g14300D
Coordinates
chrLK031893:-:833201..834385
Molecular Weight (calculated)
13837.6 Da
IEP (calculated)
5.982
GRAVY (calculated)
-0.374
Length
123 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDFLHAIHE VQPAFGASTD DLDVAAMVNA SEVKHEPAQC LFSLKLPNCK SMPLDTRQRD LPPQLCFEDN TARTVPLPEL GRPYAAELQA RCLQPSPLQS
101: LLWSHHDKES CGKRFSILLR KDL
101: LLWSHHDKES CGKRFSILLR KDL
001: MPLDKRQRDL PLGLSPQACF KDIVGRSVLP RIPLPELGKL YAAKLQARCL QPPPFQSLLC SHDKESYGKR FSRSDMRSWC AAATTTTTPL GALESSQKRL
101: LIFDQSGDQT RLLQCPFPLR FPSHAAAEPV KLSELQGIEK AFKEDGEEFH KSDGTESEMH EDTEEINALL YSDDDYDDDC ESDDEVMSTG HSPYPNEGVC
201: NKRELEEIDG PCKRQKLLDK VNNISDLSSL VGTESSTQLN GSSFLKDKKL PESKTISTKE DTGSGLSNEQ SKKDKIRTAL KILESVVPGA KGNEALLLLD
301: EAIDYLKLLK RDLISTEVKN QSSTTHKSPI LLLKETTWGT RNLQTDKA
101: LIFDQSGDQT RLLQCPFPLR FPSHAAAEPV KLSELQGIEK AFKEDGEEFH KSDGTESEMH EDTEEINALL YSDDDYDDDC ESDDEVMSTG HSPYPNEGVC
201: NKRELEEIDG PCKRQKLLDK VNNISDLSSL VGTESSTQLN GSSFLKDKKL PESKTISTKE DTGSGLSNEQ SKKDKIRTAL KILESVVPGA KGNEALLLLD
301: EAIDYLKLLK RDLISTEVKN QSSTTHKSPI LLLKETTWGT RNLQTDKA
Arabidopsis Description
SAC51Transcription factor SAC51 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMF4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.