CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96531	Canola	cytosol	80.12	87.89
CDX73074	Canola	cytosol	79.88	87.62
CDX85823	Canola	nucleus	94.85	87.54
Bra003807.1-P	Field mustard	nucleus	94.72	87.53
AT1G74310.1	Thale cress	nucleus	91.78	82.11
KRH56831	Soybean	endoplasmic reticulum	86.14	77.06
VIT_17s0000g07190.t01	Wine grape	nucleus	85.77	76.73
GSMUA_Achr1P13710_001	Banana	cytosol	77.79	74.5
Solyc03g115230.2.1	Tomato	plastid	82.82	74.09
KRH54672	Soybean	endoplasmic reticulum	68.22	73.84
PGSC0003DMT400063352	Potato	nucleus	82.45	73.68
TraesCS3A01G274400.1	Wheat	cytosol	82.33	73.49
Zm00001d038806_P001	Maize	nucleus	82.09	73.36
Os05t0519700-01	Rice	nucleus	81.96	73.25
TraesCS3B01G308100.1	Wheat	cytosol	81.96	73.17
TraesCS3D01G273600.1	Wheat	cytosol	81.96	73.17
EES19828	Sorghum	nucleus	81.96	73.17
GSMUA_Achr3P16240_001	Banana	cytosol	76.44	73.12
TraesCS1D01G342100.1	Wheat	golgi	82.33	73.09
TraesCS1B01G352400.1	Wheat	cytosol, golgi	82.21	73.06
TraesCS1A01G340100.1	Wheat	nucleus	81.72	72.55
EES01468	Sorghum	nucleus	80.0	71.26
Solyc06g082560.1.1	Tomato	plastid	73.5	70.14
TraesCS4B01G393100.1	Wheat	cytosol	67.61	61.02
HORVU7Hr1G008950.1	Barley	cytosol, plastid	14.36	49.16
CDX85552	Canola	cytosol	15.34	49.02
CDY64721	Canola	cytosol	14.23	47.54
CDY53470	Canola	mitochondrion	44.17	45.4
CDY68892	Canola	mitochondrion, plastid	44.79	44.03
CDX90991	Canola	plastid	49.94	42.22
CDX69524	Canola	plastid	49.45	41.42
CDY26423	Canola	plastid	49.33	41.32
CDY64710	Canola	cytosol	40.98	40.63
CDX76768	Canola	mitochondrion	48.22	40.39
CDY56280	Canola	mitochondrion	48.22	40.35
CDX84888	Canola	cytosol	40.74	40.15
CDX85551	Canola	plastid	29.45	36.7
CDX83052	Canola	mitochondrion	41.6	36.57
CDX68504	Canola	mitochondrion	41.6	36.53
CDY05878	Canola	mitochondrion	41.35	36.16
CDY45800	Canola	plastid	40.86	36.16
CDY38846	Canola	plastid	38.28	33.51
CDY32646	Canola	plastid	38.4	33.51
CDX71686	Canola	plastid	38.28	33.48

Protein Annotations

Gene3D:1.10.1780.10	Gene3D:1.10.8.60	MapMan:26.4.2.3	Gene3D:3.40.50.300	GO:A0A078BU48	InterPro:AAA+_ATPase
InterPro:ATPase_AAA_core	EnsemblPlants:CDX68190	ProteinID:CDX68190	ProteinID:CDX68190.1	InterPro:ClpA/B	InterPro:ClpA/B_CS1
InterPro:ClpA/B_CS2	InterPro:Clp_ATPase_C	InterPro:Clp_N	InterPro:Clp_N_dom_sf	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0008150	GO:GO:0008152	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00099450001	InterPro:IPR036628	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF02861	PFAM:PF07724
PFAM:PF10431	PRINTS:PR00300	ScanProsite:PS00870	ScanProsite:PS00871	PANTHER:PTHR11638	PANTHER:PTHR11638:SF146
SMART:SM00382	SMART:SM01086	SUPFAM:SSF52540	SUPFAM:SSF81923	UniParc:UPI0004EDAE02	SEG:seg

Description

BnaA07g22300D

Coordinates

chrLK031787:+:4355333..4358843

Molecular Weight (calculated)

90491.8 Da

IEP (calculated)

5.556

GRAVY (calculated)

-0.332

Length

815 amino acids

Sequence
(BLAST)

001: MNPEKFTHKT NETIAAAHEL AVNSGHAQIT PLHLAGALIS DPPEYSLKPS PAPAPPPNPP KESYAELIPL RNSQIKDLLS EVGVGAGKVK AEVESASGDT
101: NFQALKTYGR DLVEEAGKLD PVIGRDEEIR RVVRILSRRT KNNPVLIGEP GVGKTSVVEG LVQRIVKGDV LIDLTDVRLV SLDMGALVAG AKYRGEFEER
201: LKAVLKEVEE AEGKVILFID EIHLVLGAGK SEGSMDAANL FKPMLARGQL RCIGATTLEE YRKYVEKDAA FERRFQQVYV AEPSVVDTIS ILRGLIERYE
301: GHHGVRIQDR ALINAAQLSA RYITGRHLPD KAIDLVDEAC ANVRLEIELH ALEREKDKAS KARLVEVRKE LDDLRDKLQP LTMKYRKEKE RIDEIRRLKQ
401: KREELIYGAI QEVESAIAQL EGTSDDNMML TENVGPEHIA EVVSRWTGIP VTRLGQNEKD RLIGLADRLH KRVVGQDQAV NAVAEAILRS RAGLGRPQQP
501: TGSFLFLGPT GVGKTELAKA LAEQLFDDEN LLVRIDMSEY MEQHSVSRLI GAPPGYVGHE EGGQLTEAVR RRPYCVILFD EVEKAHVAVF NTLLQVLDDG
601: RLTDGQGRTV DFRNSVIIMT SNLGAEHLLS GLTGKVTMQV ARECVMQEVR KHFRPELLNR LDEIVVFDPL SHDQLRKVAR LQMKDVAVRL AERGVALAVT
701: DAALDYILAE SYDPVYGARP IRRWMEKKVV TELSKMVVRE EIDENSTVYI DAGSGGSDLV YRVEKNGGIV NATTGQKSDV LIHIANGPKK NDAAQAVKKM
801: RIEEIEDDDE EMVED

Best Arabidopsis Sequence Match ( AT1G74310.1 )
(BLAST)

001: MNPEKFTHKT NETIATAHEL AVNAGHAQFT PLHLAGALIS DPTGIFPQAI SSAGGENAAQ SAERVINQAL KKLPSQSPPP DDIPASSSLI KVIRRAQAAQ
101: KSRGDTHLAV DQLIMGLLED SQIRDLLNEV GVATARVKSE VEKLRGKEGK KVESASGDTN FQALKTYGRD LVEQAGKLDP VIGRDEEIRR VVRILSRRTK
201: NNPVLIGEPG VGKTAVVEGL AQRIVKGDVP NSLTDVRLIS LDMGALVAGA KYRGEFEERL KSVLKEVEDA EGKVILFIDE IHLVLGAGKT EGSMDAANLF
301: KPMLARGQLR CIGATTLEEY RKYVEKDAAF ERRFQQVYVA EPSVPDTISI LRGLKEKYEG HHGVRIQDRA LINAAQLSAR YITGRHLPDK AIDLVDEACA
401: NVRVQLDSQP EEIDNLERKR MQLEIELHAL EREKDKASKA RLIEVRKELD DLRDKLQPLT MKYRKEKERI DEIRRLKQKR EELMFSLQEA ERRYDLARAA
501: DLRYGAIQEV ESAIAQLEGT SSEENVMLTE NVGPEHIAEV VSRWTGIPVT RLGQNEKERL IGLADRLHKR VVGQNQAVNA VSEAILRSRA GLGRPQQPTG
601: SFLFLGPTGV GKTELAKALA EQLFDDENLL VRIDMSEYME QHSVSRLIGA PPGYVGHEEG GQLTEAVRRR PYCVILFDEV EKAHVAVFNT LLQVLDDGRL
701: TDGQGRTVDF RNSVIIMTSN LGAEHLLAGL TGKVTMEVAR DCVMREVRKH FRPELLNRLD EIVVFDPLSH DQLRKVARLQ MKDVAVRLAE RGVALAVTDA
801: ALDYILAESY DPVYGARPIR RWMEKKVVTE LSKMVVREEI DENSTVYIDA GAGDLVYRVE SGGLVDASTG KKSDVLIHIA NGPKRSDAAQ AVKKMRIEEI
901: EDDDNEEMIE D

Arabidopsis Description

CLPB1Chaperone protein ClpB1 [Source:UniProtKB/Swiss-Prot;Acc:P42730]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.