Factsheet for HORVU7Hr1G008950.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G102460.1	Barley	cytosol	41.6	64.29
HORVU7Hr1G008380.2	Barley	cytosol	65.97	53.77
HORVU4Hr1G008860.1	Barley	cytosol, peroxisome	45.8	49.77
HORVU6Hr1G063810.3	Barley	plastid	54.62	46.1
HORVU7Hr1G008940.2	Barley	cytosol	89.92	33.7
HORVU5Hr1G123460.3	Barley	mitochondrion	54.62	27.25
HORVU7Hr1G105430.1	Barley	cytosol	55.88	23.71
HORVU7Hr1G105530.1	Barley	cytosol	55.88	20.24
HORVU5Hr1G102440.2	Barley	mitochondrion, plastid	55.88	19.91
HORVU1Hr1G068970.1	Barley	cytosol	57.98	19.14
HORVU7Hr1G105270.3	Barley	cytosol	55.88	18.63
CDX96531	Canola	cytosol	50.42	16.15
CDX73074	Canola	cytosol	50.42	16.15
KRH54672	Soybean	endoplasmic reticulum	49.58	15.67
CDX68190	Canola	nucleus	49.16	14.36
Solyc06g082560.1.1	Tomato	plastid	49.58	13.82
CDX85823	Canola	nucleus	50.42	13.59
Bra003807.1-P	Field mustard	nucleus	50.0	13.49
KRH56831	Soybean	endoplasmic reticulum	50.84	13.28
VIT_17s0000g07190.t01	Wine grape	nucleus	50.42	13.17
Bra015922.1-P	Field mustard	nucleus	50.42	13.17
AT1G74310.1	Thale cress	nucleus	50.0	13.06
PGSC0003DMT400063352	Potato	nucleus	50.0	13.05
HORVU3Hr1G071120.7	Barley	cytosol	50.0	13.02
HORVU1Hr1G076190.4	Barley	nucleus	50.0	12.99
Solyc03g115230.2.1	Tomato	plastid	49.58	12.95
HORVU5Hr1G081860.1	Barley	cytosol	39.92	12.43
HORVU4Hr1G014120.2	Barley	plastid	46.64	11.83
HORVU2Hr1G071080.3	Barley	plastid	45.38	11.78
HORVU6Hr1G028690.1	Barley	mitochondrion	47.06	11.38
HORVU2Hr1G072020.5	Barley	plastid	39.5	11.27
HORVU5Hr1G031470.6	Barley	endoplasmic reticulum, golgi, mitochondrion, plastid	45.38	11.1
GSMUA_Achr1P13710_001	Banana	cytosol	39.5	11.05
GSMUA_Achr3P16240_001	Banana	cytosol	39.08	10.92
HORVU4Hr1G090440.2	Barley	plastid	47.9	10.78
HORVU7Hr1G035110.4	Barley	cytosol	13.87	7.5
HORVU1Hr1G076100.1	Barley	cytosol	5.04	7.36
HORVU7Hr1G009000.2	Barley	cytosol	1.26	0.85

Protein Annotations

EnsemblPlants:HORVU7Hr1G008950.1	EnsemblPlantsGene:HORVU7Hr1G008950	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:ClpA/B_CS1	InterPro:P-loop_NTPase	PANTHER:PTHR11638
PANTHER:PTHR11638:SF100	PFAM:PF00004	ScanProsite:PS00870	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI000B474703
UniProt:A0A287VH41	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:11811652..11812555

Molecular Weight (calculated)

25857.2 Da

IEP (calculated)

7.873

GRAVY (calculated)

-0.095

Length

238 amino acids

Sequence
(BLAST)

001: TLAASAFYDL YLQRSHAFDI MPSDLSPGSR YIYTRTQSND KAERAITTCS VLSALDAYRA DPVDGRDDEI DRVVCILCRR TKNCAALVGP AGVGKTAIVE
101: GLAQRIATGN VPDALAGARI LELDMGAVVA GTKWRGMFEE RLKDAIKHAE EAGGKVILFI DELHMIVGAG DKGGPMDAAN ILKPALARGR IRCVGATTSE
201: EYHRYIQRDA ALERRFQKVV VEEPNVQATI GILRGRLI

Best Arabidopsis Sequence Match ( AT1G74310.1 )
(BLAST)

001: MNPEKFTHKT NETIATAHEL AVNAGHAQFT PLHLAGALIS DPTGIFPQAI SSAGGENAAQ SAERVINQAL KKLPSQSPPP DDIPASSSLI KVIRRAQAAQ
101: KSRGDTHLAV DQLIMGLLED SQIRDLLNEV GVATARVKSE VEKLRGKEGK KVESASGDTN FQALKTYGRD LVEQAGKLDP VIGRDEEIRR VVRILSRRTK
201: NNPVLIGEPG VGKTAVVEGL AQRIVKGDVP NSLTDVRLIS LDMGALVAGA KYRGEFEERL KSVLKEVEDA EGKVILFIDE IHLVLGAGKT EGSMDAANLF
301: KPMLARGQLR CIGATTLEEY RKYVEKDAAF ERRFQQVYVA EPSVPDTISI LRGLKEKYEG HHGVRIQDRA LINAAQLSAR YITGRHLPDK AIDLVDEACA
401: NVRVQLDSQP EEIDNLERKR MQLEIELHAL EREKDKASKA RLIEVRKELD DLRDKLQPLT MKYRKEKERI DEIRRLKQKR EELMFSLQEA ERRYDLARAA
501: DLRYGAIQEV ESAIAQLEGT SSEENVMLTE NVGPEHIAEV VSRWTGIPVT RLGQNEKERL IGLADRLHKR VVGQNQAVNA VSEAILRSRA GLGRPQQPTG
601: SFLFLGPTGV GKTELAKALA EQLFDDENLL VRIDMSEYME QHSVSRLIGA PPGYVGHEEG GQLTEAVRRR PYCVILFDEV EKAHVAVFNT LLQVLDDGRL
701: TDGQGRTVDF RNSVIIMTSN LGAEHLLAGL TGKVTMEVAR DCVMREVRKH FRPELLNRLD EIVVFDPLSH DQLRKVARLQ MKDVAVRLAE RGVALAVTDA
801: ALDYILAESY DPVYGARPIR RWMEKKVVTE LSKMVVREEI DENSTVYIDA GAGDLVYRVE SGGLVDASTG KKSDVLIHIA NGPKRSDAAQ AVKKMRIEEI
901: EDDDNEEMIE D

Arabidopsis Description

CLPB1Chaperone protein ClpB1 [Source:UniProtKB/Swiss-Prot;Acc:P42730]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.