Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G009000.2 | Barley | cytosol | 75.45 | 94.32 |
| HORVU7Hr1G008940.2 | Barley | cytosol | 93.41 | 64.72 |
| TraesCS7A01G050700.1 | Wheat | extracellular | 89.32 | 59.19 |
| TraesCS4A01G436600.1 | Wheat | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 89.09 | 59.04 |
| TraesCS7A01G050600.1 | Wheat | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 76.36 | 56.85 |
| KRH63249 | Soybean | mitochondrion | 22.73 | 51.55 |
| HORVU7Hr1G105530.1 | Barley | cytosol | 64.09 | 42.92 |
| HORVU5Hr1G102440.2 | Barley | mitochondrion, plastid | 64.32 | 42.37 |
| HORVU5Hr1G123460.3 | Barley | mitochondrion | 45.23 | 41.72 |
| HORVU7Hr1G105270.3 | Barley | cytosol | 64.32 | 39.64 |
| HORVU1Hr1G068970.1 | Barley | cytosol | 63.18 | 38.56 |
| HORVU7Hr1G105430.1 | Barley | cytosol | 48.86 | 38.32 |
| OQU81585 | Sorghum | cytosol | 54.32 | 37.0 |
| OQU85081 | Sorghum | mitochondrion, plastid | 57.95 | 35.52 |
| HORVU1Hr1G076100.1 | Barley | cytosol | 12.05 | 32.52 |
| HORVU3Hr1G071120.7 | Barley | cytosol | 56.36 | 27.13 |
| HORVU1Hr1G076190.4 | Barley | nucleus | 55.68 | 26.75 |
| HORVU7Hr1G008380.2 | Barley | cytosol | 16.14 | 24.32 |
| HORVU5Hr1G081860.1 | Barley | cytosol | 38.41 | 22.12 |
| HORVU2Hr1G072020.5 | Barley | plastid | 39.32 | 20.74 |
| HORVU2Hr1G071080.3 | Barley | plastid | 40.68 | 19.52 |
| HORVU6Hr1G028690.1 | Barley | mitochondrion | 42.95 | 19.21 |
| HORVU4Hr1G014120.2 | Barley | plastid | 39.77 | 18.66 |
| HORVU4Hr1G090440.2 | Barley | plastid | 43.64 | 18.15 |
| HORVU5Hr1G031470.6 | Barley | endoplasmic reticulum, golgi, mitochondrion, plastid | 39.77 | 17.99 |
| HORVU7Hr1G008950.1 | Barley | cytosol, plastid | 7.5 | 13.87 |
| HORVU4Hr1G008860.1 | Barley | cytosol, peroxisome | 3.41 | 6.85 |
| HORVU6Hr1G063810.3 | Barley | plastid | 4.09 | 6.38 |
| HORVU5Hr1G102460.1 | Barley | cytosol | 0.45 | 1.3 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G035110.4 | EnsemblPlantsGene:HORVU7Hr1G035110 | Gene3D:1.10.8.60 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005524 | InterPro:ATPase_AAA_core | InterPro:ClpA/B | InterPro:Clp_ATPase_C | InterPro:P-loop_NTPase |
| PANTHER:PTHR11638 | PANTHER:PTHR11638:SF100 | PFAM:PF07724 | PFAM:PF10431 | PRINTS:PR00300 | SMART:SM01086 |
| SUPFAM:SSF52540 | UniParc:UPI000B45FA1A | UniProt:A0A287W148 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr7H:+:75876366..75878195
Molecular Weight (calculated)
48961.4 Da
IEP (calculated)
7.704
GRAVY (calculated)
-0.123
Length
440 amino acids
Sequence
(BLAST)
(BLAST)
001: YIQRDAALER RFQKVVVEEP NVQATIAILR GLKQRYQEHH GLKIHDDALV AAAQLAGRYI TGRQFPDKAI DLMDEACSTA KVHFDKQKVE NSIIGSIFAP
101: KELTVSPDHV AQVVSRCTRI PLTTLGQEEK EKLVHLAKKL HERVVGQDEA VNLVAQAVLR SRIGFGQSSR PIGSFLFLGP LGVGKTELVK ALAERIFDNE
201: KALIRFDMSE YAESGSVARL IGGPRSYEED GQLTEKVKRC PYSVVLLNQV DKADPSLFKV FIQLLDDGAL TDGKGEVVDF KNTIIIMTST LGAEHLATRM
301: AVENAVKVGR HLLMEQVQKR FKPELIDRLS EVVIFEPLSH GELKEIVKIQ MKDVIATVAN KGVSLFITDA ALDVIWSESY HLVSGARPIR RWVEKNVMTV
401: LSNMLLDREA CEGSTVSIDA PDINRGLRFH VLKKQGSIDP
101: KELTVSPDHV AQVVSRCTRI PLTTLGQEEK EKLVHLAKKL HERVVGQDEA VNLVAQAVLR SRIGFGQSSR PIGSFLFLGP LGVGKTELVK ALAERIFDNE
201: KALIRFDMSE YAESGSVARL IGGPRSYEED GQLTEKVKRC PYSVVLLNQV DKADPSLFKV FIQLLDDGAL TDGKGEVVDF KNTIIIMTST LGAEHLATRM
301: AVENAVKVGR HLLMEQVQKR FKPELIDRLS EVVIFEPLSH GELKEIVKIQ MKDVIATVAN KGVSLFITDA ALDVIWSESY HLVSGARPIR RWVEKNVMTV
401: LSNMLLDREA CEGSTVSIDA PDINRGLRFH VLKKQGSIDP
001: MNPEKFTHKT NETIATAHEL AVNAGHAQFT PLHLAGALIS DPTGIFPQAI SSAGGENAAQ SAERVINQAL KKLPSQSPPP DDIPASSSLI KVIRRAQAAQ
101: KSRGDTHLAV DQLIMGLLED SQIRDLLNEV GVATARVKSE VEKLRGKEGK KVESASGDTN FQALKTYGRD LVEQAGKLDP VIGRDEEIRR VVRILSRRTK
201: NNPVLIGEPG VGKTAVVEGL AQRIVKGDVP NSLTDVRLIS LDMGALVAGA KYRGEFEERL KSVLKEVEDA EGKVILFIDE IHLVLGAGKT EGSMDAANLF
301: KPMLARGQLR CIGATTLEEY RKYVEKDAAF ERRFQQVYVA EPSVPDTISI LRGLKEKYEG HHGVRIQDRA LINAAQLSAR YITGRHLPDK AIDLVDEACA
401: NVRVQLDSQP EEIDNLERKR MQLEIELHAL EREKDKASKA RLIEVRKELD DLRDKLQPLT MKYRKEKERI DEIRRLKQKR EELMFSLQEA ERRYDLARAA
501: DLRYGAIQEV ESAIAQLEGT SSEENVMLTE NVGPEHIAEV VSRWTGIPVT RLGQNEKERL IGLADRLHKR VVGQNQAVNA VSEAILRSRA GLGRPQQPTG
601: SFLFLGPTGV GKTELAKALA EQLFDDENLL VRIDMSEYME QHSVSRLIGA PPGYVGHEEG GQLTEAVRRR PYCVILFDEV EKAHVAVFNT LLQVLDDGRL
701: TDGQGRTVDF RNSVIIMTSN LGAEHLLAGL TGKVTMEVAR DCVMREVRKH FRPELLNRLD EIVVFDPLSH DQLRKVARLQ MKDVAVRLAE RGVALAVTDA
801: ALDYILAESY DPVYGARPIR RWMEKKVVTE LSKMVVREEI DENSTVYIDA GAGDLVYRVE SGGLVDASTG KKSDVLIHIA NGPKRSDAAQ AVKKMRIEEI
901: EDDDNEEMIE D
101: KSRGDTHLAV DQLIMGLLED SQIRDLLNEV GVATARVKSE VEKLRGKEGK KVESASGDTN FQALKTYGRD LVEQAGKLDP VIGRDEEIRR VVRILSRRTK
201: NNPVLIGEPG VGKTAVVEGL AQRIVKGDVP NSLTDVRLIS LDMGALVAGA KYRGEFEERL KSVLKEVEDA EGKVILFIDE IHLVLGAGKT EGSMDAANLF
301: KPMLARGQLR CIGATTLEEY RKYVEKDAAF ERRFQQVYVA EPSVPDTISI LRGLKEKYEG HHGVRIQDRA LINAAQLSAR YITGRHLPDK AIDLVDEACA
401: NVRVQLDSQP EEIDNLERKR MQLEIELHAL EREKDKASKA RLIEVRKELD DLRDKLQPLT MKYRKEKERI DEIRRLKQKR EELMFSLQEA ERRYDLARAA
501: DLRYGAIQEV ESAIAQLEGT SSEENVMLTE NVGPEHIAEV VSRWTGIPVT RLGQNEKERL IGLADRLHKR VVGQNQAVNA VSEAILRSRA GLGRPQQPTG
601: SFLFLGPTGV GKTELAKALA EQLFDDENLL VRIDMSEYME QHSVSRLIGA PPGYVGHEEG GQLTEAVRRR PYCVILFDEV EKAHVAVFNT LLQVLDDGRL
701: TDGQGRTVDF RNSVIIMTSN LGAEHLLAGL TGKVTMEVAR DCVMREVRKH FRPELLNRLD EIVVFDPLSH DQLRKVARLQ MKDVAVRLAE RGVALAVTDA
801: ALDYILAESY DPVYGARPIR RWMEKKVVTE LSKMVVREEI DENSTVYIDA GAGDLVYRVE SGGLVDASTG KKSDVLIHIA NGPKRSDAAQ AVKKMRIEEI
901: EDDDNEEMIE D
Arabidopsis Description
CLPB1Chaperone protein ClpB1 [Source:UniProtKB/Swiss-Prot;Acc:P42730]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.