Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G304800.1 | Wheat | cytosol | 86.27 | 91.61 |
| TraesCS1B01G315600.1 | Wheat | cytosol | 89.88 | 88.28 |
| HORVU5Hr1G123460.3 | Barley | mitochondrion | 48.13 | 72.75 |
| HORVU7Hr1G105530.1 | Barley | cytosol | 64.49 | 70.78 |
| HORVU7Hr1G105430.1 | Barley | cytosol | 54.65 | 70.23 |
| HORVU5Hr1G102440.2 | Barley | mitochondrion, plastid | 63.66 | 68.71 |
| HORVU5Hr1G102460.1 | Barley | cytosol | 14.29 | 66.88 |
| HORVU7Hr1G105270.3 | Barley | cytosol | 65.46 | 66.11 |
| HORVU7Hr1G035110.4 | Barley | cytosol | 38.56 | 63.18 |
| OQU85081 | Sorghum | mitochondrion, plastid | 61.86 | 62.12 |
| HORVU7Hr1G008940.2 | Barley | cytosol | 54.09 | 61.42 |
| HORVU7Hr1G009000.2 | Barley | cytosol | 29.68 | 60.8 |
| HORVU4Hr1G008860.1 | Barley | cytosol, peroxisome | 18.31 | 60.27 |
| HORVU7Hr1G008380.2 | Barley | cytosol | 24.27 | 59.93 |
| OQU81585 | Sorghum | cytosol | 52.15 | 58.2 |
| HORVU7Hr1G008950.1 | Barley | cytosol, plastid | 19.14 | 57.98 |
| KRH63249 | Soybean | mitochondrion | 15.53 | 57.73 |
| HORVU6Hr1G063810.3 | Barley | plastid | 20.53 | 52.48 |
| HORVU3Hr1G071120.7 | Barley | cytosol | 51.87 | 40.92 |
| HORVU1Hr1G076190.4 | Barley | nucleus | 51.73 | 40.72 |
| HORVU5Hr1G081860.1 | Barley | cytosol | 38.42 | 36.26 |
| HORVU2Hr1G072020.5 | Barley | plastid | 38.84 | 33.57 |
| HORVU1Hr1G076100.1 | Barley | cytosol | 7.35 | 32.52 |
| HORVU2Hr1G071080.3 | Barley | plastid | 40.78 | 32.06 |
| HORVU6Hr1G028690.1 | Barley | mitochondrion | 41.61 | 30.49 |
| HORVU4Hr1G090440.2 | Barley | plastid | 44.24 | 30.15 |
| HORVU5Hr1G031470.6 | Barley | endoplasmic reticulum, golgi, mitochondrion, plastid | 40.36 | 29.91 |
| HORVU4Hr1G014120.2 | Barley | plastid | 38.7 | 29.74 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_core | InterPro:ClpA/B |
| InterPro:ClpA/B_CS1 | InterPro:Clp_ATPase_C | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005524 | EnsemblPlantsGene:HORVU1Hr1G068970 | EnsemblPlants:HORVU1Hr1G068970.1 | UniProt:M0V0S0 | InterPro:P-loop_NTPase | PFAM:PF00004 |
| PFAM:PF07724 | PFAM:PF10431 | PRINTS:PR00300 | ScanProsite:PS00870 | PANTHER:PTHR11638 | PANTHER:PTHR11638:SF100 |
| SMART:SM00382 | SMART:SM01086 | SUPFAM:SSF52540 | UniParc:UPI0002952DC7 | SEG:seg | : |
Description
No Description!
Coordinates
chrchr1H:-:482743244..482745872
Molecular Weight (calculated)
78243.3 Da
IEP (calculated)
5.787
GRAVY (calculated)
-0.069
Length
721 amino acids
Sequence
(BLAST)
(BLAST)
001: MTFSTWLDGV VGGGIVETIT YQVYDRASGT YVTRSSQNPN TLLDDFAGVV CTGAAAALCW AAWRYYQRTV SIGKYGRDMT ALAGKADPVI GRDDEIDRVI
101: CILSRRTKNC AVLVGAAGVG KTAIVEGLAQ RIAAGTVPAA LAGARIVEVD LGAMVAGTIF RGMFEQRIKN VINQAEDADG KVILFIDEMH MLLGAGAGLE
201: NRTTDASNML KPALARGRIR CVAATTLDEY NKYVEKDAAL ERRFQKVHVE EPSTQSTIAI LRGLKERYEQ HHGLEIQDAA LVAATTLAAR YITGRQFPDK
301: AIDLIDEACA TAAKNMMQND KQAQQFSIAL TASAVKEAIV GPDQVAQVVS RWTGIPITTL NQGEKDKLIH LAARLHERVV GQDEAVNKVA RAVLRSRTDL
401: DQPGQPIGSF LFLGSTGVGK TELAKALAEQ LFDSEKMLVR IDMSEYVGAG SVWRLIGAPP GYYEHQDGGQ LTEKVRRRPY SVILFDEVEK ADPLVLNVFL
501: QLLDDGLLTD GKGRIVDFKN TIIIMTSNVG SEHLMAGMSG ETTMETARSL LMKQVQKHYR PELLNRLGAI IVFEPLSREK LKDIVAIQMK SVVARVADKG
601: ISLCASDAAL DVILSESYDP MYGARPIRRW VQENVMTTIS EMLVNDEAGA GSTISIDATD DKKGLKYEVV KGVADPAVRL PNESGDDSDT DGNMPAKPPC
701: VTFGAEGNFY LPIKALLARI A
101: CILSRRTKNC AVLVGAAGVG KTAIVEGLAQ RIAAGTVPAA LAGARIVEVD LGAMVAGTIF RGMFEQRIKN VINQAEDADG KVILFIDEMH MLLGAGAGLE
201: NRTTDASNML KPALARGRIR CVAATTLDEY NKYVEKDAAL ERRFQKVHVE EPSTQSTIAI LRGLKERYEQ HHGLEIQDAA LVAATTLAAR YITGRQFPDK
301: AIDLIDEACA TAAKNMMQND KQAQQFSIAL TASAVKEAIV GPDQVAQVVS RWTGIPITTL NQGEKDKLIH LAARLHERVV GQDEAVNKVA RAVLRSRTDL
401: DQPGQPIGSF LFLGSTGVGK TELAKALAEQ LFDSEKMLVR IDMSEYVGAG SVWRLIGAPP GYYEHQDGGQ LTEKVRRRPY SVILFDEVEK ADPLVLNVFL
501: QLLDDGLLTD GKGRIVDFKN TIIIMTSNVG SEHLMAGMSG ETTMETARSL LMKQVQKHYR PELLNRLGAI IVFEPLSREK LKDIVAIQMK SVVARVADKG
601: ISLCASDAAL DVILSESYDP MYGARPIRRW VQENVMTTIS EMLVNDEAGA GSTISIDATD DKKGLKYEVV KGVADPAVRL PNESGDDSDT DGNMPAKPPC
701: VTFGAEGNFY LPIKALLARI A
001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL
Arabidopsis Description
CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.