Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G273600.1 | Wheat | cytosol | 97.7 | 97.81 |
| TraesCS3A01G274400.1 | Wheat | cytosol | 97.48 | 97.59 |
| TraesCS3B01G308100.1 | Wheat | cytosol | 97.37 | 97.48 |
| HORVU1Hr1G076190.4 | Barley | nucleus | 91.14 | 90.94 |
| EES01468 | Sorghum | nucleus | 89.39 | 89.29 |
| HORVU1Hr1G076100.1 | Barley | cytosol | 12.8 | 71.78 |
| HORVU5Hr1G123460.3 | Barley | mitochondrion | 31.73 | 60.8 |
| HORVU7Hr1G009000.2 | Barley | cytosol | 21.88 | 56.82 |
| HORVU7Hr1G035110.4 | Barley | cytosol | 27.13 | 56.36 |
| HORVU7Hr1G008940.2 | Barley | cytosol | 38.18 | 54.96 |
| HORVU7Hr1G105430.1 | Barley | cytosol | 33.37 | 54.37 |
| HORVU7Hr1G105530.1 | Barley | cytosol | 39.06 | 54.34 |
| HORVU5Hr1G102440.2 | Barley | mitochondrion, plastid | 38.73 | 52.99 |
| HORVU1Hr1G068970.1 | Barley | cytosol | 40.92 | 51.87 |
| HORVU7Hr1G008380.2 | Barley | cytosol | 16.52 | 51.71 |
| HORVU7Hr1G105270.3 | Barley | cytosol | 39.28 | 50.28 |
| HORVU7Hr1G008950.1 | Barley | cytosol, plastid | 13.02 | 50.0 |
| HORVU5Hr1G102460.1 | Barley | cytosol | 8.21 | 48.7 |
| HORVU4Hr1G008860.1 | Barley | cytosol, peroxisome | 11.27 | 47.03 |
| HORVU6Hr1G063810.3 | Barley | plastid | 13.68 | 44.33 |
| HORVU6Hr1G028690.1 | Barley | mitochondrion | 46.06 | 42.78 |
| HORVU4Hr1G090440.2 | Barley | plastid | 47.48 | 41.02 |
| HORVU5Hr1G081860.1 | Barley | cytosol | 33.92 | 40.58 |
| HORVU2Hr1G072020.5 | Barley | plastid | 35.01 | 38.37 |
| HORVU2Hr1G071080.3 | Barley | plastid | 37.86 | 37.73 |
| HORVU4Hr1G014120.2 | Barley | plastid | 37.86 | 36.89 |
| HORVU5Hr1G031470.6 | Barley | endoplasmic reticulum, golgi, mitochondrion, plastid | 37.53 | 35.25 |
Protein Annotations
| Gene3D:1.10.1780.10 | Gene3D:1.10.8.60 | MapMan:26.4.2.3 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_core |
| InterPro:ClpA/B | InterPro:ClpA/B_CS1 | InterPro:ClpA/B_CS2 | InterPro:Clp_ATPase_C | InterPro:Clp_N | InterPro:Clp_N_dom_sf |
| ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0019538 | EnsemblPlantsGene:HORVU3Hr1G071120 | EnsemblPlants:HORVU3Hr1G071120.7 | InterPro:IPR036628 | UniProt:M0WFE2 |
| InterPro:P-loop_NTPase | PFAM:PF00004 | PFAM:PF02861 | PFAM:PF07724 | PFAM:PF10431 | PRINTS:PR00300 |
| ScanProsite:PS00870 | ScanProsite:PS00871 | PANTHER:PTHR11638 | PANTHER:PTHR11638:SF146 | SMART:SM00382 | SMART:SM01086 |
| SUPFAM:SSF52540 | SUPFAM:SSF81923 | UniParc:UPI0002962257 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr3H:-:538150650..538154544
Molecular Weight (calculated)
100788.0 Da
IEP (calculated)
6.221
GRAVY (calculated)
-0.330
Length
914 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPDKFTHKT NEALAAAHEM ASEAGHAQLT PLHLAAALAA DRSGILRQAI AHASGGNDAA VESFERVAST ALKRLPSQSP PPDTVPASTS LVKAVRRAQS
101: AQKSRGDSHL AVDQLIVGLL EDPQISDALK EAGASAARVK AEVEKLRGGD NRRVESASGD TNFQALKTYG RDLVEVAGKL DPVIGRDEEI RRVVRILSRR
201: TKNNPVLIGE PGVGKTAVVE GLAQRVVRGD VPSNLLDVRL VALDMGALVA GAKYRGEFEE RLKAVLKEVE EAEGKVILFI DEIHLVLGAG RTEGSMDAAN
301: LFKPMLARGQ LRCIGATTLE EYRKYVEKDA AFERRFQQVL VAEPSVPDTV SILRGLKEKY EGHHGVRIQD RALVVAAQLS ARYIMGRHLP DKAIDLVDEA
401: CANVRVQLDS QPEEIDNLER KRIQLEVELH ALEREKDKAS KARLVDVRKE LEDLRDKLQP LQMKYRKEKE RIDEIRSLKQ RREELQFTLQ EAERRMDLAR
501: VADLRYGALQ EVDAAIARLE GETGENLMLT ETVGPDQIAE VVSRWTGIPV TRLGQNEKAR LIGLADRLHQ RVVGQYEAVN AVGEAVLRSR AGLGRPQQPT
601: GSFLFLGPTG VGKTELAKAL AEQLFDDENL LVRIDMSEYM EQHSVARLIG APPGYVGHEE GGQLTEQVRR RPYSVILFDE VEKAHVAVFN TLLQVLDDGR
701: LTDGQGRTVD FRNTVIIMTS NLGAEHLLAG MVGNSMKVAR DLVMQEVRRH FRPELLNRLD EMVIFDPLSH EQLRKVARLQ MKDVAARLAE RGVALAVTDA
801: ALDVILSLSY DPVYGARPIR RWIEKRIVTE LSKMLIREEI DENSTVYVDA APGKDELTYG VDKHGGLVNA STGRKSDILI QVPSGAVGGG DAAHAVKKMK
901: VMQDGGDVDD MEEE
101: AQKSRGDSHL AVDQLIVGLL EDPQISDALK EAGASAARVK AEVEKLRGGD NRRVESASGD TNFQALKTYG RDLVEVAGKL DPVIGRDEEI RRVVRILSRR
201: TKNNPVLIGE PGVGKTAVVE GLAQRVVRGD VPSNLLDVRL VALDMGALVA GAKYRGEFEE RLKAVLKEVE EAEGKVILFI DEIHLVLGAG RTEGSMDAAN
301: LFKPMLARGQ LRCIGATTLE EYRKYVEKDA AFERRFQQVL VAEPSVPDTV SILRGLKEKY EGHHGVRIQD RALVVAAQLS ARYIMGRHLP DKAIDLVDEA
401: CANVRVQLDS QPEEIDNLER KRIQLEVELH ALEREKDKAS KARLVDVRKE LEDLRDKLQP LQMKYRKEKE RIDEIRSLKQ RREELQFTLQ EAERRMDLAR
501: VADLRYGALQ EVDAAIARLE GETGENLMLT ETVGPDQIAE VVSRWTGIPV TRLGQNEKAR LIGLADRLHQ RVVGQYEAVN AVGEAVLRSR AGLGRPQQPT
601: GSFLFLGPTG VGKTELAKAL AEQLFDDENL LVRIDMSEYM EQHSVARLIG APPGYVGHEE GGQLTEQVRR RPYSVILFDE VEKAHVAVFN TLLQVLDDGR
701: LTDGQGRTVD FRNTVIIMTS NLGAEHLLAG MVGNSMKVAR DLVMQEVRRH FRPELLNRLD EMVIFDPLSH EQLRKVARLQ MKDVAARLAE RGVALAVTDA
801: ALDVILSLSY DPVYGARPIR RWIEKRIVTE LSKMLIREEI DENSTVYVDA APGKDELTYG VDKHGGLVNA STGRKSDILI QVPSGAVGGG DAAHAVKKMK
901: VMQDGGDVDD MEEE
001: MNPEKFTHKT NETIATAHEL AVNAGHAQFT PLHLAGALIS DPTGIFPQAI SSAGGENAAQ SAERVINQAL KKLPSQSPPP DDIPASSSLI KVIRRAQAAQ
101: KSRGDTHLAV DQLIMGLLED SQIRDLLNEV GVATARVKSE VEKLRGKEGK KVESASGDTN FQALKTYGRD LVEQAGKLDP VIGRDEEIRR VVRILSRRTK
201: NNPVLIGEPG VGKTAVVEGL AQRIVKGDVP NSLTDVRLIS LDMGALVAGA KYRGEFEERL KSVLKEVEDA EGKVILFIDE IHLVLGAGKT EGSMDAANLF
301: KPMLARGQLR CIGATTLEEY RKYVEKDAAF ERRFQQVYVA EPSVPDTISI LRGLKEKYEG HHGVRIQDRA LINAAQLSAR YITGRHLPDK AIDLVDEACA
401: NVRVQLDSQP EEIDNLERKR MQLEIELHAL EREKDKASKA RLIEVRKELD DLRDKLQPLT MKYRKEKERI DEIRRLKQKR EELMFSLQEA ERRYDLARAA
501: DLRYGAIQEV ESAIAQLEGT SSEENVMLTE NVGPEHIAEV VSRWTGIPVT RLGQNEKERL IGLADRLHKR VVGQNQAVNA VSEAILRSRA GLGRPQQPTG
601: SFLFLGPTGV GKTELAKALA EQLFDDENLL VRIDMSEYME QHSVSRLIGA PPGYVGHEEG GQLTEAVRRR PYCVILFDEV EKAHVAVFNT LLQVLDDGRL
701: TDGQGRTVDF RNSVIIMTSN LGAEHLLAGL TGKVTMEVAR DCVMREVRKH FRPELLNRLD EIVVFDPLSH DQLRKVARLQ MKDVAVRLAE RGVALAVTDA
801: ALDYILAESY DPVYGARPIR RWMEKKVVTE LSKMVVREEI DENSTVYIDA GAGDLVYRVE SGGLVDASTG KKSDVLIHIA NGPKRSDAAQ AVKKMRIEEI
901: EDDDNEEMIE D
101: KSRGDTHLAV DQLIMGLLED SQIRDLLNEV GVATARVKSE VEKLRGKEGK KVESASGDTN FQALKTYGRD LVEQAGKLDP VIGRDEEIRR VVRILSRRTK
201: NNPVLIGEPG VGKTAVVEGL AQRIVKGDVP NSLTDVRLIS LDMGALVAGA KYRGEFEERL KSVLKEVEDA EGKVILFIDE IHLVLGAGKT EGSMDAANLF
301: KPMLARGQLR CIGATTLEEY RKYVEKDAAF ERRFQQVYVA EPSVPDTISI LRGLKEKYEG HHGVRIQDRA LINAAQLSAR YITGRHLPDK AIDLVDEACA
401: NVRVQLDSQP EEIDNLERKR MQLEIELHAL EREKDKASKA RLIEVRKELD DLRDKLQPLT MKYRKEKERI DEIRRLKQKR EELMFSLQEA ERRYDLARAA
501: DLRYGAIQEV ESAIAQLEGT SSEENVMLTE NVGPEHIAEV VSRWTGIPVT RLGQNEKERL IGLADRLHKR VVGQNQAVNA VSEAILRSRA GLGRPQQPTG
601: SFLFLGPTGV GKTELAKALA EQLFDDENLL VRIDMSEYME QHSVSRLIGA PPGYVGHEEG GQLTEAVRRR PYCVILFDEV EKAHVAVFNT LLQVLDDGRL
701: TDGQGRTVDF RNSVIIMTSN LGAEHLLAGL TGKVTMEVAR DCVMREVRKH FRPELLNRLD EIVVFDPLSH DQLRKVARLQ MKDVAVRLAE RGVALAVTDA
801: ALDYILAESY DPVYGARPIR RWMEKKVVTE LSKMVVREEI DENSTVYIDA GAGDLVYRVE SGGLVDASTG KKSDVLIHIA NGPKRSDAAQ AVKKMRIEEI
901: EDDDNEEMIE D
Arabidopsis Description
CLPB1Chaperone protein ClpB1 [Source:UniProtKB/Swiss-Prot;Acc:P42730]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.