Factsheet for TraesCS3D01G273600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G308100.1	Wheat	cytosol	99.45	99.45
TraesCS3A01G274400.1	Wheat	cytosol	99.34	99.34
HORVU3Hr1G071120.7	Barley	cytosol	97.81	97.7
TraesCS1D01G342100.1	Wheat	golgi	91.79	91.29
EES01468	Sorghum	nucleus	90.47	90.27
GSMUA_Achr1P13710_001	Banana	cytosol	81.05	86.96
CDX96531	Canola	cytosol	69.22	85.06
CDX73074	Canola	cytosol	69.11	84.93
VIT_17s0000g07190.t01	Wine grape	nucleus	84.56	84.74
GSMUA_Achr3P16240_001	Banana	cytosol	79.08	84.74
KRH56831	Soybean	endoplasmic reticulum	84.01	84.19
Bra015922.1-P	Field mustard	nucleus	83.9	84.08
CDX85823	Canola	nucleus	81.05	83.81
KRH54672	Soybean	endoplasmic reticulum	68.78	83.4
AT1G74310.1	Thale cress	nucleus	83.13	83.31
Bra003807.1-P	Field mustard	nucleus	79.74	82.54
Solyc03g115230.2.1	Tomato	plastid	82.04	82.22
PGSC0003DMT400063352	Potato	nucleus	81.93	82.02
CDX68190	Canola	nucleus	73.17	81.96
Solyc06g082560.1.1	Tomato	plastid	75.03	80.21
AT4G14670.1	Thale cress	cytosol	47.32	69.34
TraesCS3D01G090400.1	Wheat	mitochondrion	37.24	57.24
TraesCS7D01G445400.1	Wheat	cytosol	35.27	56.69
TraesCS4D01G046000.1	Wheat	cytosol	40.85	56.26
TraesCS2D01G136900.1	Wheat	cytosol	32.09	56.13
TraesCS4D01G047000.1	Wheat	cytosol	40.96	56.07
TraesCS7D01G045400.1	Wheat	cytosol	29.24	54.16
TraesCS5D01G429500.1	Wheat	cytosol	39.65	54.11
TraesCS5D01G429400.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	39.43	53.97
TraesCS7D01G045500.1	Wheat	endoplasmic reticulum	36.58	53.7
TraesCS7D01G045200.1	Wheat	extracellular, mitochondrion	30.78	53.42
TraesCS7D01G045700.1	Wheat	endoplasmic reticulum	36.36	53.38
TraesCS7D01G042900.1	Wheat	cytosol	37.24	52.88
TraesCS7D01G046200.1	Wheat	cytosol	30.23	52.87
TraesCS7D01G042800.1	Wheat	plastid	36.8	52.26
TraesCS5D01G074000.1	Wheat	mitochondrion	39.65	52.24
TraesCS5D01G429700.1	Wheat	endoplasmic reticulum, mitochondrion, plastid	38.99	51.74
TraesCS5D01G429600.1	Wheat	mitochondrion	38.88	51.6
TraesCS3D01G449000.1	Wheat	cytosol	15.55	51.08
TraesCS5D01G254700.2	Wheat	mitochondrion	23.33	50.24
TraesCS7D01G445500.1	Wheat	cytosol	19.06	48.47
AT4G14675.1	Thale cress	cytosol	8.0	45.91
TraesCS6D01G135600.1	Wheat	golgi	46.55	42.89
TraesCS2D01G285800.1	Wheat	plastid	37.79	37.62
TraesCS5D01G118700.1	Wheat	plastid	37.9	37.61
TraesCS6D01G183600.2	Wheat	cytosol, plastid	37.57	37.45
TraesCS4D01G081100.1	Wheat	plastid	37.79	36.7
TraesCS5D01G328100.1	Wheat	plastid	35.71	35.05
TraesCS2D01G289100.1	Wheat	plastid	36.25	34.99

Protein Annotations

Gene3D:1.10.1780.10	Gene3D:1.10.8.60	MapMan:26.4.2.3	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core
InterPro:ClpA/B	InterPro:ClpA/B_CS1	InterPro:ClpA/B_CS2	InterPro:Clp_ATPase_C	InterPro:Clp_N	InterPro:Clp_N_dom_sf
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0008150
GO:GO:0008152	GO:GO:0019538	InterPro:IPR036628	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF02861
PFAM:PF07724	PFAM:PF10431	PRINTS:PR00300	ScanProsite:PS00870	ScanProsite:PS00871	PANTHER:PTHR11638
PANTHER:PTHR11638:SF146	SMART:SM00382	SMART:SM01086	SUPFAM:SSF52540	SUPFAM:SSF81923	EnsemblPlantsGene:TraesCS3D01G273600
EnsemblPlants:TraesCS3D01G273600.1	TIGR:cd00009	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3D:-:379536248..379539614

Molecular Weight (calculated)

100903.0 Da

IEP (calculated)

6.271

GRAVY (calculated)

-0.329

Length

913 amino acids

Sequence
(BLAST)

001: MNPDKFTHKT NEALAAAHEM ASEAGHAQLT PLHLAAALAA DRSGILRQAI AHASGGNDAA AESFERVASA ALKRLPSQSP PPDTVPASTS LVKAVRRAQS
101: AQKSRGDSHL AVDQLLMGLL EDPQISDALK EAGISAARVK AEVEKLRGGD NRRVESASGD TNFQALKTYG RDLVEVAGKL DPVIGRDEEI RRVVRILSRR
201: TKNNPVLIGE PGVGKTAVVE GLAQRVVRGD VPSNLLDVRL VALDMGALVA GAKYRGEFEE RLKAVLKEVE EAEGKVILFI DEIHLVLGAG RTEGSMDAAN
301: LFKPMLARGQ LRCIGATTLE EYRKYVEKDA AFERRFQQVF VAEPSVPDTV SILRGLKEKY EGHHGVRIQD RALVIAAQLS SRYIMGRHLP DKAIDLVDEA
401: CANVRVQLDS QPEEIDNLER KRIQLEVELH ALEKEKDKAS KARLVDVRKE LDDLRDKLQP LQMKYRKEKE RIDEIRSLKQ RREELQFTLQ EAERRMDLAR
501: VADLRYGALQ EVDAAIAKLE GETGENLMLT ETVGPDQIAE VVSRWTGIPV TRLGQNEKAR LIGLADRLHQ RVVGQYEAVN AVGEAVLRSR AGLGRPQQPT
601: GSFLFLGPTG VGKTELAKAL AEQLFDDENL LVRIDMSEYM EQHSVARLIG APPGYVGHEE GGQLTEQVRR RPYSVILFDE VEKAHVAVFN TLLQVLDDGR
701: LTDGQGRTVD FRNTVIIMTS NLGAEHLLAG MVGNSMKVAR DLVMQEVRRH FRPELLNRLD EIVIFDPLSH EQLRKVARLQ MKDVAVRLAE RGVALAVTDA
801: ALDVILSLSY DPVYGARPIR RWIEKRIVTE LSKMLIREEI DENSTVYIDA APSKDELTYG VDKHGGLVNA RTGHKSDILI QVPSGAVGGD AAHAVKKMKI
901: MQDSGEVDDM EEE

Best Arabidopsis Sequence Match ( AT1G74310.1 )
(BLAST)

001: MNPEKFTHKT NETIATAHEL AVNAGHAQFT PLHLAGALIS DPTGIFPQAI SSAGGENAAQ SAERVINQAL KKLPSQSPPP DDIPASSSLI KVIRRAQAAQ
101: KSRGDTHLAV DQLIMGLLED SQIRDLLNEV GVATARVKSE VEKLRGKEGK KVESASGDTN FQALKTYGRD LVEQAGKLDP VIGRDEEIRR VVRILSRRTK
201: NNPVLIGEPG VGKTAVVEGL AQRIVKGDVP NSLTDVRLIS LDMGALVAGA KYRGEFEERL KSVLKEVEDA EGKVILFIDE IHLVLGAGKT EGSMDAANLF
301: KPMLARGQLR CIGATTLEEY RKYVEKDAAF ERRFQQVYVA EPSVPDTISI LRGLKEKYEG HHGVRIQDRA LINAAQLSAR YITGRHLPDK AIDLVDEACA
401: NVRVQLDSQP EEIDNLERKR MQLEIELHAL EREKDKASKA RLIEVRKELD DLRDKLQPLT MKYRKEKERI DEIRRLKQKR EELMFSLQEA ERRYDLARAA
501: DLRYGAIQEV ESAIAQLEGT SSEENVMLTE NVGPEHIAEV VSRWTGIPVT RLGQNEKERL IGLADRLHKR VVGQNQAVNA VSEAILRSRA GLGRPQQPTG
601: SFLFLGPTGV GKTELAKALA EQLFDDENLL VRIDMSEYME QHSVSRLIGA PPGYVGHEEG GQLTEAVRRR PYCVILFDEV EKAHVAVFNT LLQVLDDGRL
701: TDGQGRTVDF RNSVIIMTSN LGAEHLLAGL TGKVTMEVAR DCVMREVRKH FRPELLNRLD EIVVFDPLSH DQLRKVARLQ MKDVAVRLAE RGVALAVTDA
801: ALDYILAESY DPVYGARPIR RWMEKKVVTE LSKMVVREEI DENSTVYIDA GAGDLVYRVE SGGLVDASTG KKSDVLIHIA NGPKRSDAAQ AVKKMRIEEI
901: EDDDNEEMIE D

Arabidopsis Description

CLPB1Chaperone protein ClpB1 [Source:UniProtKB/Swiss-Prot;Acc:P42730]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.