Factsheet for TraesCS3D01G090400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G090400.1	Wheat	cytosol	83.17	95.37
TraesCS7D01G445400.1	Wheat	cytosol	68.52	71.65
TraesCS2D01G136900.1	Wheat	cytosol	61.62	70.11
Os02t0537400-01	Rice	cytosol	51.01	69.18
TraesCS5D01G429400.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	75.76	67.47
TraesCS5D01G429500.1	Wheat	cytosol	75.93	67.41
TraesCS5D01G429700.1	Wheat	endoplasmic reticulum, mitochondrion, plastid	76.26	65.84
TraesCS5D01G429600.1	Wheat	mitochondrion	75.93	65.55
TraesCS4D01G046000.1	Wheat	cytosol	71.89	64.4
TraesCS4D01G047000.1	Wheat	cytosol	70.37	62.67
TraesCS7D01G046200.1	Wheat	cytosol	54.71	62.26
TraesCS7D01G045400.1	Wheat	cytosol	50.84	61.26
TraesCS5D01G074000.1	Wheat	mitochondrion	70.37	60.32
TraesCS7D01G445500.1	Wheat	cytosol	36.2	59.89
KRH63249	Soybean	mitochondrion	19.53	59.79
TraesCS3D01G449000.1	Wheat	cytosol	27.95	59.71
TraesCS7D01G045500.1	Wheat	endoplasmic reticulum	62.46	59.65
TraesCS7D01G045700.1	Wheat	endoplasmic reticulum	62.46	59.65
TraesCS7D01G045200.1	Wheat	extracellular, mitochondrion	51.01	57.6
TraesCS7D01G042900.1	Wheat	cytosol	61.95	57.23
TraesCS7D01G042800.1	Wheat	plastid	61.78	57.08
OQU85081	Sorghum	mitochondrion, plastid	68.35	56.55
OQU81585	Sorghum	cytosol	59.26	54.49
TraesCS5D01G254700.2	Wheat	mitochondrion	37.88	53.07
TraesCS3D01G273600.1	Wheat	cytosol	57.24	37.24
TraesCS1D01G342100.1	Wheat	golgi	56.9	36.82
TraesCS6D01G183600.2	Wheat	cytosol, plastid	46.3	30.02
TraesCS2D01G285800.1	Wheat	plastid	46.13	29.88
TraesCS5D01G118700.1	Wheat	plastid	45.62	29.46
TraesCS6D01G135600.1	Wheat	golgi	47.81	28.66
TraesCS4D01G081100.1	Wheat	plastid	44.95	28.4
TraesCS5D01G328100.1	Wheat	plastid	41.58	26.56
TraesCS2D01G289100.1	Wheat	plastid	42.26	26.53

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:ClpA/B
InterPro:ClpA/B_CS1	InterPro:Clp_ATPase_C	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF07724	PFAM:PF10431	PRINTS:PR00300	ScanProsite:PS00870
PANTHER:PTHR11638	PANTHER:PTHR11638:SF100	SMART:SM00382	SMART:SM01086	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS3D01G090400
EnsemblPlants:TraesCS3D01G090400.1	TIGR:cd00009	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3D:+:45930659..45933462

Molecular Weight (calculated)

64616.8 Da

IEP (calculated)

7.252

GRAVY (calculated)

0.006

Length

594 amino acids

Sequence
(BLAST)

001: MTRSTVISIL CCKTKNCVAL VGAPGVGKTA IAEGLAQWIA AGKVPAELSK ARVVEVDLGA MVAGTVLRGM FESRLKTVIK EAENSGGKII LFIDEMHMLI
101: GAGDKWGSND AANILKPALA RGRIRCVGAT TFDDYRKYIE KDAALERRFQ KVHVEEPSTQ ATIAILRGIK QQYELHHSLE IQDAAIVAAA ELAGRYITGR
201: QFPDKAIDLI DAACATAKKM MQIDSQEKEE DTVKKAIVAP NHVAQAVSRC TGIPVSTLDQ EEKDRLIHLA DRLHERVVGQ DEAVNLVAEA VLRSRAGLDQ
301: PGQPIGSFLF LGLTGVGKTE LAKALAEQLF DSEKMLVRID MSEYVGFGAV ARLIGAAPSC IGYDDGGQLT EIVRRRPYSV ILFDEVEKAD PLVLNVFIQL
401: LDDGVLTDGK GRTVDFKNTI IIMTSNLGAE HLTAGMAGES TMEAAKDLVM KKVQKHFKPE FLNRLSEVVI FEPLLHDKLK EIVKIQMKSV TARVAAKSIS
501: LSASDAALDV ILLESCNLMY GARPIRRWVQ KNVMTVLSRM LLKGEAVEGS TIVIDATDDK RGLRYEVVNP QGKSPVVELS CDKSYVAAVT NPKP

Best Arabidopsis Sequence Match ( AT3G48870.1 )
(BLAST)

001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL

Arabidopsis Description

CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.