Factsheet for TraesCS3D01G449000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63249	Soybean	mitochondrion	29.14	41.75
Os02t0537400-01	Rice	cytosol	60.79	38.58
TraesCS2D01G136900.1	Wheat	cytosol	59.35	31.61
TraesCS7D01G445400.1	Wheat	cytosol	57.91	28.35
TraesCS3D01G090400.1	Wheat	mitochondrion	59.71	27.95
TraesCS7D01G045400.1	Wheat	cytosol	48.56	27.38
TraesCS5D01G429400.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	60.07	25.04
TraesCS5D01G429500.1	Wheat	cytosol	60.07	24.96
TraesCS7D01G046200.1	Wheat	cytosol	46.76	24.9
TraesCS5D01G074000.1	Wheat	mitochondrion	61.87	24.82
TraesCS5D01G429700.1	Wheat	endoplasmic reticulum, mitochondrion, plastid	61.15	24.71
TraesCS4D01G047000.1	Wheat	cytosol	58.99	24.59
TraesCS4D01G046000.1	Wheat	cytosol	58.27	24.43
TraesCS5D01G429600.1	Wheat	mitochondrion	60.07	24.27
OQU81585	Sorghum	cytosol	54.68	23.53
TraesCS7D01G045500.1	Wheat	endoplasmic reticulum	51.08	22.83
TraesCS7D01G045700.1	Wheat	endoplasmic reticulum	50.72	22.67
TraesCS7D01G042800.1	Wheat	plastid	49.28	21.31
TraesCS7D01G042900.1	Wheat	cytosol	48.92	21.15
OQU85081	Sorghum	mitochondrion, plastid	53.6	20.75
TraesCS3D01G273600.1	Wheat	cytosol	51.08	15.55
TraesCS1D01G342100.1	Wheat	golgi	50.0	15.14
TraesCS7D01G045200.1	Wheat	extracellular, mitochondrion	27.7	14.64
TraesCS2D01G285800.1	Wheat	plastid	38.85	11.78
TraesCS5D01G118700.1	Wheat	plastid	38.49	11.63
TraesCS6D01G183600.2	Wheat	cytosol, plastid	38.13	11.57
TraesCS4D01G081100.1	Wheat	plastid	38.49	11.38
TraesCS2D01G289100.1	Wheat	plastid	35.61	10.47
TraesCS5D01G328100.1	Wheat	plastid	34.17	10.22
TraesCS6D01G135600.1	Wheat	golgi	35.97	10.09
TraesCS5D01G254700.2	Wheat	mitochondrion	5.4	3.54
TraesCS7D01G445500.1	Wheat	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:ATPase_AAA_core	InterPro:ClpA/B	InterPro:ClpA/B_CS2
InterPro:Clp_ATPase_C	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:P-loop_NTPase
PFAM:PF07724	PFAM:PF10431	PRINTS:PR00300	ScanProsite:PS00871	PANTHER:PTHR11638	PANTHER:PTHR11638:SF100
SMART:SM01086	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS3D01G449000	EnsemblPlants:TraesCS3D01G449000.1	TIGR:cd00009	SEG:seg

Description

No Description!

Coordinates

chr3D:-:557648106..557649218

Molecular Weight (calculated)

31228.2 Da

IEP (calculated)

10.136

GRAVY (calculated)

-0.351

Length

278 amino acids

Sequence
(BLAST)

001: MLVRFDMSEY VEAHSVSRLI GAPPSYVGHE NGGQLTEKVR KHPYSVILLD EVEKAHPSVF NVFHQVLDDG MLTDGLGRTV DFKNTIIIMT SNLGAGHLST
101: GMANKKETKG LLMKQVEKYF KPEFLNRLSE IVIFEPLLQE KLKEIVKIQI KKVVAGVACK GISLSATDVA LDVILAESYN PMYGARPIRR WVQKNVITKL
201: SELLVHEEAG EGSAIHIDAM GDKGLKYEVV KKATVDPQED KDVNHRRWLK RQRGLLSSGM KPNRLSKKRA KKRAQEKS

Best Arabidopsis Sequence Match ( AT1G74310.1 )
(BLAST)

001: MNPEKFTHKT NETIATAHEL AVNAGHAQFT PLHLAGALIS DPTGIFPQAI SSAGGENAAQ SAERVINQAL KKLPSQSPPP DDIPASSSLI KVIRRAQAAQ
101: KSRGDTHLAV DQLIMGLLED SQIRDLLNEV GVATARVKSE VEKLRGKEGK KVESASGDTN FQALKTYGRD LVEQAGKLDP VIGRDEEIRR VVRILSRRTK
201: NNPVLIGEPG VGKTAVVEGL AQRIVKGDVP NSLTDVRLIS LDMGALVAGA KYRGEFEERL KSVLKEVEDA EGKVILFIDE IHLVLGAGKT EGSMDAANLF
301: KPMLARGQLR CIGATTLEEY RKYVEKDAAF ERRFQQVYVA EPSVPDTISI LRGLKEKYEG HHGVRIQDRA LINAAQLSAR YITGRHLPDK AIDLVDEACA
401: NVRVQLDSQP EEIDNLERKR MQLEIELHAL EREKDKASKA RLIEVRKELD DLRDKLQPLT MKYRKEKERI DEIRRLKQKR EELMFSLQEA ERRYDLARAA
501: DLRYGAIQEV ESAIAQLEGT SSEENVMLTE NVGPEHIAEV VSRWTGIPVT RLGQNEKERL IGLADRLHKR VVGQNQAVNA VSEAILRSRA GLGRPQQPTG
601: SFLFLGPTGV GKTELAKALA EQLFDDENLL VRIDMSEYME QHSVSRLIGA PPGYVGHEEG GQLTEAVRRR PYCVILFDEV EKAHVAVFNT LLQVLDDGRL
701: TDGQGRTVDF RNSVIIMTSN LGAEHLLAGL TGKVTMEVAR DCVMREVRKH FRPELLNRLD EIVVFDPLSH DQLRKVARLQ MKDVAVRLAE RGVALAVTDA
801: ALDYILAESY DPVYGARPIR RWMEKKVVTE LSKMVVREEI DENSTVYIDA GAGDLVYRVE SGGLVDASTG KKSDVLIHIA NGPKRSDAAQ AVKKMRIEEI
901: EDDDNEEMIE D

Arabidopsis Description

CLPB1Chaperone protein ClpB1 [Source:UniProtKB/Swiss-Prot;Acc:P42730]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.