Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G083000.1 | Wheat | plastid | 98.4 | 98.4 |
| TraesCS4A01G232800.1 | Wheat | plastid | 98.19 | 98.4 |
| HORVU4Hr1G014120.2 | Barley | plastid | 95.53 | 95.74 |
| Os11t0267400-01 | Rice | plasma membrane | 74.04 | 74.68 |
| TraesCS2D01G285800.1 | Wheat | plastid | 72.02 | 73.83 |
| TraesCS6D01G183600.2 | Wheat | cytosol, plastid | 71.28 | 73.14 |
| TraesCS5D01G118700.1 | Wheat | plastid | 71.49 | 73.04 |
| Os11t0269000-00 | Rice | cytosol, plasma membrane | 25.74 | 61.42 |
| EES13207 | Sorghum | cytosol | 27.13 | 60.86 |
| OQU79828 | Sorghum | plastid | 47.55 | 57.75 |
| TraesCS3D01G090400.1 | Wheat | mitochondrion | 28.4 | 44.95 |
| TraesCS2D01G136900.1 | Wheat | cytosol | 24.47 | 44.06 |
| TraesCS4D01G047000.1 | Wheat | cytosol | 30.74 | 43.33 |
| TraesCS4D01G046000.1 | Wheat | cytosol | 30.53 | 43.29 |
| TraesCS7D01G045200.1 | Wheat | extracellular, mitochondrion | 24.04 | 42.97 |
| TraesCS7D01G445400.1 | Wheat | cytosol | 25.96 | 42.96 |
| TraesCS7D01G445500.1 | Wheat | cytosol | 16.38 | 42.9 |
| TraesCS7D01G045500.1 | Wheat | endoplasmic reticulum | 28.09 | 42.44 |
| TraesCS7D01G045700.1 | Wheat | endoplasmic reticulum | 27.98 | 42.28 |
| TraesCS5D01G429400.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 29.79 | 41.98 |
| TraesCS5D01G328100.1 | Wheat | plastid | 41.38 | 41.83 |
| TraesCS5D01G429500.1 | Wheat | cytosol | 29.68 | 41.7 |
| TraesCS5D01G254700.2 | Wheat | mitochondrion | 18.72 | 41.51 |
| TraesCS2D01G289100.1 | Wheat | plastid | 41.38 | 41.12 |
| TraesCS5D01G429700.1 | Wheat | endoplasmic reticulum, mitochondrion, plastid | 29.68 | 40.55 |
| TraesCS5D01G074000.1 | Wheat | mitochondrion | 29.79 | 40.4 |
| TraesCS5D01G429600.1 | Wheat | mitochondrion | 29.26 | 39.97 |
| TraesCS7D01G042800.1 | Wheat | plastid | 27.23 | 39.81 |
| TraesCS7D01G045400.1 | Wheat | cytosol | 20.85 | 39.76 |
| TraesCS7D01G042900.1 | Wheat | cytosol | 26.6 | 38.88 |
| TraesCS6D01G135600.1 | Wheat | golgi | 40.64 | 38.55 |
| TraesCS7D01G046200.1 | Wheat | cytosol | 21.38 | 38.51 |
| TraesCS3D01G449000.1 | Wheat | cytosol | 11.38 | 38.49 |
| TraesCS1D01G342100.1 | Wheat | golgi | 37.02 | 37.91 |
| TraesCS3D01G273600.1 | Wheat | cytosol | 36.7 | 37.79 |
Protein Annotations
| Gene3D:1.10.1780.10 | Gene3D:1.10.8.60 | MapMan:19.4.2.9.4 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_core |
| InterPro:ClpA/B | InterPro:ClpA/B_CS1 | InterPro:ClpA/B_CS2 | InterPro:Clp_ATPase_C | InterPro:Clp_N | InterPro:Clp_N_dom_sf |
| ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0019538 | InterPro:IPR001943 | InterPro:IPR036628 | InterPro:P-loop_NTPase |
| PFAM:PF00004 | PFAM:PF02151 | PFAM:PF02861 | PFAM:PF07724 | PFAM:PF10431 | PRINTS:PR00300 |
| ScanProsite:PS00870 | ScanProsite:PS00871 | PFscan:PS50151 | PANTHER:PTHR43572 | PANTHER:PTHR43572:SF8 | SMART:SM00382 |
| SMART:SM01086 | SUPFAM:SSF52540 | SUPFAM:SSF81923 | EnsemblPlantsGene:TraesCS4D01G081100 | EnsemblPlants:TraesCS4D01G081100.1 | InterPro:UVR_dom |
| TIGR:cd00009 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr4D:+:55047122..55052157
Molecular Weight (calculated)
102718.0 Da
IEP (calculated)
6.783
GRAVY (calculated)
-0.298
Length
940 amino acids
Sequence
(BLAST)
(BLAST)
001: MESTLLRPPA LGLGSPAGLG GGTAGWRSRS ATTPPSVVPA LPKPARWRPV KMSALAGHRR DLHTHPATPT PASVFLGGGG GGFGPSSLSS RGSSSRGRRR
101: LVARAMFESF TEKAIRVIML AQEESRRLGH HTVGSEQILL GLVGEGTGIA AKVLRSAGLN LKDARAEVEK VLGRGPGLIP IEIPFTASAK KVIESSTEES
201: RQLGHNYIGT EHLLLGLIRE DDGAAAIVLK NFQADLGDIR NEVIKMITDM SEDQTVGAGV GGGSSGAKMP TLEEYGTNLT KLAQEGKLDP VVGRNKQIER
301: VLQILGRRTK NNPCLIGEPG VGKTAIAEGL AQRIATGDVP ETVEGKTVIT LDMGLLVAGT KYRGEFEERL KKLMEEIKQS GDIILFLDEV HTLVGAGAAE
401: GAIDAANILK PALARGELQC LGATTIDEYR KHIEKDPALE RRFQPVKVPE PTVDETIGIL KGLRERYEIH HKLRYSDEAL IAAAQLSYQY ISDRFLPDKA
501: IDLVDEAGSL VRLRHAKLPD EAKDLDKKLK EITRQKNDAI RSQEFETAGE LRREELELKT QIMSLVDKSK EVSKAEMESG ASAGPMVTEA DIQRIVASWT
601: SVPVEKVSVD ESSRLLKMEE TLHGRVIGQD EAVRAIGRAI RRARVGLRNP NRPVASFIFA GPTGVGKSEL AKALATSYYG SEEAMVRLDM SEFMERHTVA
701: KLIGSPPGYV GYTEGGQLTE AVRRRPYTVV LLDEIEKAHP DVFNLMLQIM EDGRLTDSRG RTVDFKNTLI IMTSNVGSSV IEKGGKQLGF DHDDGEARSS
801: YGRIKSLVDE EMKQYFRPEF LNRLDEMIVF RQLTKMEVKE IAVIMLAEVT GRMKAKGIEL MVTENFKDLV VEEGYDPSYG ARPLRRAIMR LLEDKLADKM
901: LAEDVKEGDY VIIDADPMGN VAVLSRHSDL PKDQPLAFPA
101: LVARAMFESF TEKAIRVIML AQEESRRLGH HTVGSEQILL GLVGEGTGIA AKVLRSAGLN LKDARAEVEK VLGRGPGLIP IEIPFTASAK KVIESSTEES
201: RQLGHNYIGT EHLLLGLIRE DDGAAAIVLK NFQADLGDIR NEVIKMITDM SEDQTVGAGV GGGSSGAKMP TLEEYGTNLT KLAQEGKLDP VVGRNKQIER
301: VLQILGRRTK NNPCLIGEPG VGKTAIAEGL AQRIATGDVP ETVEGKTVIT LDMGLLVAGT KYRGEFEERL KKLMEEIKQS GDIILFLDEV HTLVGAGAAE
401: GAIDAANILK PALARGELQC LGATTIDEYR KHIEKDPALE RRFQPVKVPE PTVDETIGIL KGLRERYEIH HKLRYSDEAL IAAAQLSYQY ISDRFLPDKA
501: IDLVDEAGSL VRLRHAKLPD EAKDLDKKLK EITRQKNDAI RSQEFETAGE LRREELELKT QIMSLVDKSK EVSKAEMESG ASAGPMVTEA DIQRIVASWT
601: SVPVEKVSVD ESSRLLKMEE TLHGRVIGQD EAVRAIGRAI RRARVGLRNP NRPVASFIFA GPTGVGKSEL AKALATSYYG SEEAMVRLDM SEFMERHTVA
701: KLIGSPPGYV GYTEGGQLTE AVRRRPYTVV LLDEIEKAHP DVFNLMLQIM EDGRLTDSRG RTVDFKNTLI IMTSNVGSSV IEKGGKQLGF DHDDGEARSS
801: YGRIKSLVDE EMKQYFRPEF LNRLDEMIVF RQLTKMEVKE IAVIMLAEVT GRMKAKGIEL MVTENFKDLV VEEGYDPSYG ARPLRRAIMR LLEDKLADKM
901: LAEDVKEGDY VIIDADPMGN VAVLSRHSDL PKDQPLAFPA
001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL
Arabidopsis Description
CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.