Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G232800.1 | Wheat | plastid | 95.84 | 95.84 |
| TraesCS4B01G083000.1 | Wheat | plastid | 95.95 | 95.74 |
| TraesCS4D01G081100.1 | Wheat | plastid | 95.74 | 95.53 |
| Os11t0267400-01 | Rice | plasma membrane | 74.52 | 75.0 |
| HORVU2Hr1G071080.3 | Barley | plastid | 72.49 | 74.15 |
| HORVU5Hr1G031470.6 | Barley | endoplasmic reticulum, golgi, mitochondrion, plastid | 71.64 | 69.06 |
| Os11t0269000-00 | Rice | cytosol, plasma membrane | 26.44 | 62.94 |
| EES13207 | Sorghum | cytosol | 27.83 | 62.29 |
| OQU79828 | Sorghum | plastid | 48.4 | 58.66 |
| HORVU5Hr1G123460.3 | Barley | mitochondrion | 25.16 | 49.48 |
| HORVU5Hr1G102460.1 | Barley | cytosol | 8.0 | 48.7 |
| HORVU7Hr1G008950.1 | Barley | cytosol, plastid | 11.83 | 46.64 |
| HORVU5Hr1G081860.1 | Barley | cytosol | 37.74 | 46.34 |
| HORVU7Hr1G008380.2 | Barley | cytosol | 13.97 | 44.86 |
| HORVU7Hr1G105430.1 | Barley | cytosol | 26.44 | 44.21 |
| HORVU2Hr1G072020.5 | Barley | plastid | 38.17 | 42.93 |
| HORVU5Hr1G102440.2 | Barley | mitochondrion, plastid | 30.17 | 42.37 |
| HORVU7Hr1G105530.1 | Barley | cytosol | 29.64 | 42.31 |
| HORVU7Hr1G008940.2 | Barley | cytosol | 28.46 | 42.05 |
| HORVU4Hr1G008860.1 | Barley | cytosol, peroxisome | 9.81 | 42.01 |
| HORVU7Hr1G035110.4 | Barley | cytosol | 18.66 | 39.77 |
| HORVU7Hr1G105270.3 | Barley | cytosol | 29.64 | 38.94 |
| HORVU6Hr1G028690.1 | Barley | mitochondrion | 40.83 | 38.92 |
| HORVU1Hr1G068970.1 | Barley | cytosol | 29.74 | 38.7 |
| HORVU6Hr1G063810.3 | Barley | plastid | 11.62 | 38.65 |
| HORVU1Hr1G076190.4 | Barley | nucleus | 36.99 | 37.88 |
| HORVU3Hr1G071120.7 | Barley | cytosol | 36.89 | 37.86 |
| HORVU7Hr1G009000.2 | Barley | cytosol | 13.97 | 37.22 |
| HORVU4Hr1G090440.2 | Barley | plastid | 39.87 | 35.35 |
| HORVU1Hr1G076100.1 | Barley | cytosol | 5.97 | 34.36 |
Protein Annotations
| Gene3D:1.10.1780.10 | Gene3D:1.10.8.60 | MapMan:19.4.2.9.4 | Gene3D:3.40.50.300 | UniProt:A0A287NB42 | InterPro:AAA+_ATPase |
| InterPro:ATPase_AAA_core | InterPro:ClpA/B | InterPro:ClpA/B_CS1 | InterPro:ClpA/B_CS2 | InterPro:Clp_ATPase_C | InterPro:Clp_N |
| InterPro:Clp_N_dom_sf | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005524 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0019538 | EnsemblPlantsGene:HORVU4Hr1G014120 | EnsemblPlants:HORVU4Hr1G014120.2 |
| InterPro:IPR001943 | InterPro:IPR036628 | InterPro:P-loop_NTPase | PFAM:PF00004 | PFAM:PF02151 | PFAM:PF02861 |
| PFAM:PF07724 | PFAM:PF10431 | PRINTS:PR00300 | ScanProsite:PS00870 | ScanProsite:PS00871 | PFscan:PS50151 |
| PANTHER:PTHR43572 | PANTHER:PTHR43572:SF8 | SMART:SM00382 | SMART:SM01086 | SUPFAM:SSF52540 | SUPFAM:SSF81923 |
| UniParc:UPI000B47DD59 | InterPro:UVR_dom | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:51173347..51179971
Molecular Weight (calculated)
102560.0 Da
IEP (calculated)
6.543
GRAVY (calculated)
-0.295
Length
938 amino acids
Sequence
(BLAST)
(BLAST)
001: MESTLLRPPA LGLGSPAGLG GSTASWRSRS AERPPSVVPA LPIKPARWRS VKMSAIAGHR RDLHTPAVTL TPASMFGGGG FGPSSSSSRG SSTRGRRRVV
101: ARAMFESFTE KAIRVIMLAQ EESRRLGHHT VGSEQILLGL VGEGTGIAAK VLRSAGLNLK DARAEVEKVL GRGPGLIPVE IPFTASAKKV IESSNEESRQ
201: LGHNYIGTEH LLLGLIREDD GAAAIVLKNF QADLGDIRNE VIKMITEMSE DQTVGAGVGG GSSGAKMPTL EEYGTNLTKL AQEGKLDPVV GRKKQIERVL
301: QILGRRTKNN PCLIGEPGVG KTAIAEGLAQ RIATGDVPET VEGKTVITLD MGLLVAGTKY RGEFEERLKK LMEEIKQNGD IILFLDEVHT LVGAGAAEGA
401: IDAANILKPA LARGELQCLG ATTIDEYRKH IEKDPALERR FQPVKVPEPT VDETIGILKG LRERYEIHHK LRYTDEALIA AAQLSYQYIS DRFLPDKAID
501: LVDEAGSLVR LRHAKLPDEA KDLDKKLKEI TRQKNDAIRS QQFETAAELR SEELELKTQI MSLVDKSKEV SKAEVESGAS TGPMVTEADI QRIVASWTSV
601: PVEKVSVDES SRLLKMEETL HGRVIGQDEA VRAIGRAIRR ARVGLRNPNR PVASFIFAGP TGVGKSELAK ALAASYYGSE EAMVRLDMSE FMERHTVAKL
701: IGSPPGYVGY TEGGQLTEAV RRRPYTVVLL DEIEKAHPDV FNLMLQIMED GRLTDSRGRT VDFKNTLIIM TSNVGSSVIE KGGKQLGFDH DDGEARNSYG
801: RIKSLVDEEM KQYFRPEFLN RLDEMIVFRQ LTKMEVKEIA AIMLDEVAGR MRAKGIELLV TESFKELVVE EGYDPSYGAR PLRRAIMRLL EDKLADKMLA
901: EDVKEGDGVI VDADPAGNVV VLSRHSDLPE DQPLAFPA
101: ARAMFESFTE KAIRVIMLAQ EESRRLGHHT VGSEQILLGL VGEGTGIAAK VLRSAGLNLK DARAEVEKVL GRGPGLIPVE IPFTASAKKV IESSNEESRQ
201: LGHNYIGTEH LLLGLIREDD GAAAIVLKNF QADLGDIRNE VIKMITEMSE DQTVGAGVGG GSSGAKMPTL EEYGTNLTKL AQEGKLDPVV GRKKQIERVL
301: QILGRRTKNN PCLIGEPGVG KTAIAEGLAQ RIATGDVPET VEGKTVITLD MGLLVAGTKY RGEFEERLKK LMEEIKQNGD IILFLDEVHT LVGAGAAEGA
401: IDAANILKPA LARGELQCLG ATTIDEYRKH IEKDPALERR FQPVKVPEPT VDETIGILKG LRERYEIHHK LRYTDEALIA AAQLSYQYIS DRFLPDKAID
501: LVDEAGSLVR LRHAKLPDEA KDLDKKLKEI TRQKNDAIRS QQFETAAELR SEELELKTQI MSLVDKSKEV SKAEVESGAS TGPMVTEADI QRIVASWTSV
601: PVEKVSVDES SRLLKMEETL HGRVIGQDEA VRAIGRAIRR ARVGLRNPNR PVASFIFAGP TGVGKSELAK ALAASYYGSE EAMVRLDMSE FMERHTVAKL
701: IGSPPGYVGY TEGGQLTEAV RRRPYTVVLL DEIEKAHPDV FNLMLQIMED GRLTDSRGRT VDFKNTLIIM TSNVGSSVIE KGGKQLGFDH DDGEARNSYG
801: RIKSLVDEEM KQYFRPEFLN RLDEMIVFRQ LTKMEVKEIA AIMLDEVAGR MRAKGIELLV TESFKELVVE EGYDPSYGAR PLRRAIMRLL EDKLADKMLA
901: EDVKEGDGVI VDADPAGNVV VLSRHSDLPE DQPLAFPA
001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL
Arabidopsis Description
CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.