Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G342100.1 | Wheat | golgi | 99.24 | 99.02 |
| TraesCS1B01G352400.1 | Wheat | cytosol, golgi | 98.91 | 98.8 |
| TraesCS1A01G340100.1 | Wheat | nucleus | 98.47 | 98.26 |
| Os05t0519700-01 | Rice | nucleus | 94.21 | 94.63 |
| EES19828 | Sorghum | nucleus | 94.0 | 94.3 |
| Zm00001d038806_P001 | Maize | nucleus | 93.34 | 93.75 |
| HORVU3Hr1G071120.7 | Barley | cytosol | 90.94 | 91.14 |
| HORVU1Hr1G076100.1 | Barley | cytosol | 13.43 | 75.46 |
| HORVU5Hr1G123460.3 | Barley | mitochondrion | 31.99 | 61.43 |
| HORVU7Hr1G009000.2 | Barley | cytosol | 21.62 | 56.25 |
| HORVU7Hr1G035110.4 | Barley | cytosol | 26.75 | 55.68 |
| HORVU7Hr1G008940.2 | Barley | cytosol | 37.77 | 54.49 |
| HORVU7Hr1G105430.1 | Barley | cytosol | 33.19 | 54.19 |
| HORVU7Hr1G105530.1 | Barley | cytosol | 38.76 | 54.03 |
| HORVU5Hr1G102440.2 | Barley | mitochondrion, plastid | 38.54 | 52.84 |
| HORVU1Hr1G068970.1 | Barley | cytosol | 40.72 | 51.73 |
| HORVU7Hr1G008380.2 | Barley | cytosol | 16.27 | 51.03 |
| HORVU7Hr1G008950.1 | Barley | cytosol, plastid | 12.99 | 50.0 |
| HORVU7Hr1G105270.3 | Barley | cytosol | 38.54 | 49.44 |
| HORVU5Hr1G102460.1 | Barley | cytosol | 8.19 | 48.7 |
| HORVU4Hr1G008860.1 | Barley | cytosol, peroxisome | 11.24 | 47.03 |
| HORVU6Hr1G063810.3 | Barley | plastid | 13.43 | 43.62 |
| HORVU6Hr1G028690.1 | Barley | mitochondrion | 46.4 | 43.19 |
| HORVU4Hr1G090440.2 | Barley | plastid | 48.03 | 41.59 |
| HORVU5Hr1G081860.1 | Barley | cytosol | 34.06 | 40.84 |
| HORVU2Hr1G072020.5 | Barley | plastid | 35.7 | 39.21 |
| HORVU2Hr1G071080.3 | Barley | plastid | 37.77 | 37.73 |
| HORVU4Hr1G014120.2 | Barley | plastid | 37.88 | 36.99 |
| HORVU5Hr1G031470.6 | Barley | endoplasmic reticulum, golgi, mitochondrion, plastid | 37.55 | 35.35 |
Protein Annotations
| Gene3D:1.10.1780.10 | Gene3D:1.10.8.60 | MapMan:26.4.2.3 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | EMBL:AK370126 |
| InterPro:ATPase_AAA_core | InterPro:ClpA/B | InterPro:ClpA/B_CS1 | InterPro:ClpA/B_CS2 | InterPro:Clp_ATPase_C | InterPro:Clp_N |
| InterPro:Clp_N_dom_sf | ncoils:Coil | UniProt:F2E1V5 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009628 | GO:GO:0009987 |
| GO:GO:0019538 | GO:GO:0034605 | EnsemblPlantsGene:HORVU1Hr1G076190 | EnsemblPlants:HORVU1Hr1G076190.4 | InterPro:IPR036628 | InterPro:P-loop_NTPase |
| PFAM:PF00004 | PFAM:PF02861 | PFAM:PF07724 | PFAM:PF10431 | PRINTS:PR00300 | ScanProsite:PS00870 |
| ScanProsite:PS00871 | PANTHER:PTHR11638 | PANTHER:PTHR11638:SF146 | SMART:SM00382 | SMART:SM01086 | SUPFAM:SSF52540 |
| SUPFAM:SSF81923 | UniParc:UPI00020077A5 | SEG:seg | : | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2E1V5]
Coordinates
chrchr1H:-:513272898..513276720
Molecular Weight (calculated)
100914.0 Da
IEP (calculated)
6.132
GRAVY (calculated)
-0.314
Length
916 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPDNFTHKT NEALVAAHEA ASEAGHAQIT PLHLAAALAA DKSGILRQAV AGASGGNAAA GDSFERVLTA ALKKLPSQSP PPDSVPASTA LIKAIRRAQS
101: AQKKRGDSHL AVDQLLMGLL EDSQIADCLK EAGVSASRVR AELEKLRGGD SRKVESASGD TNFQALKTYG RDLVEVAGKL DPVIGRDEEI RRVVRILSRR
201: TKNNPVLIGE PGVGKTAVVE GLAQRVVRGD VPSNLLDVRL VALDMGALVA GAKYRGEFEE RLKAVLKEVE EAEGKVILFI DEIHLVLGAG RTEGSMDAAN
301: LFKPMLARGQ LRCIGATTLE EYRKYVEKDA AFERRFQQVY VAEPSVADTI SILRGLKEKY EGHHGVRIQD RAIVVAAQLS ARYIMGRHLP DKAIDLVDEA
401: CANVRVQLDS QPEEIDNLER KRIQLEVELH ALEKEKDKAS KARLVEVRKE LDDLRDKLQP LTMKYRKEKE RIDEIRKLKQ RREELQFTLQ EAERRMDLAR
501: VADLKYGALQ EIDAAIAKLE GETGENLMLT ETVGPEQIAE VVSRWTGIPV TRLGQNDKER LVGMADRLHT RVVGQTEAVN AVAEAVLRSR AGLGRPQQPT
601: GSFLFLGPTG VGKTELAKAL AEQLFDDENL LVRIDMSEYM EQHSVARLIG APPGYVGHEE GGQLTEQVRR RPYSVILFDE VEKAHVAVFN TLLQVLDDGR
701: LTDGQGRTVD FRNTVIIMTS NLGAEHLLAG MVGKNSMKVA RDLVMQEVRR HFRPELLNRL DEIVVFDPLS HEQLRKVARL QMKDVAVRLA ERGVALAVTD
801: AALDVILSLA YDPVYGARPI RRWIEKRVVT QLSKMLIQEE IDENCTVYID AANKDELAYR VDRTGGLVNA ETGQRSDILI QVPNGALAGG GGEAAKAVKK
901: MRVMEDGDED GMDEDA
101: AQKKRGDSHL AVDQLLMGLL EDSQIADCLK EAGVSASRVR AELEKLRGGD SRKVESASGD TNFQALKTYG RDLVEVAGKL DPVIGRDEEI RRVVRILSRR
201: TKNNPVLIGE PGVGKTAVVE GLAQRVVRGD VPSNLLDVRL VALDMGALVA GAKYRGEFEE RLKAVLKEVE EAEGKVILFI DEIHLVLGAG RTEGSMDAAN
301: LFKPMLARGQ LRCIGATTLE EYRKYVEKDA AFERRFQQVY VAEPSVADTI SILRGLKEKY EGHHGVRIQD RAIVVAAQLS ARYIMGRHLP DKAIDLVDEA
401: CANVRVQLDS QPEEIDNLER KRIQLEVELH ALEKEKDKAS KARLVEVRKE LDDLRDKLQP LTMKYRKEKE RIDEIRKLKQ RREELQFTLQ EAERRMDLAR
501: VADLKYGALQ EIDAAIAKLE GETGENLMLT ETVGPEQIAE VVSRWTGIPV TRLGQNDKER LVGMADRLHT RVVGQTEAVN AVAEAVLRSR AGLGRPQQPT
601: GSFLFLGPTG VGKTELAKAL AEQLFDDENL LVRIDMSEYM EQHSVARLIG APPGYVGHEE GGQLTEQVRR RPYSVILFDE VEKAHVAVFN TLLQVLDDGR
701: LTDGQGRTVD FRNTVIIMTS NLGAEHLLAG MVGKNSMKVA RDLVMQEVRR HFRPELLNRL DEIVVFDPLS HEQLRKVARL QMKDVAVRLA ERGVALAVTD
801: AALDVILSLA YDPVYGARPI RRWIEKRVVT QLSKMLIQEE IDENCTVYID AANKDELAYR VDRTGGLVNA ETGQRSDILI QVPNGALAGG GGEAAKAVKK
901: MRVMEDGDED GMDEDA
001: MNPEKFTHKT NETIATAHEL AVNAGHAQFT PLHLAGALIS DPTGIFPQAI SSAGGENAAQ SAERVINQAL KKLPSQSPPP DDIPASSSLI KVIRRAQAAQ
101: KSRGDTHLAV DQLIMGLLED SQIRDLLNEV GVATARVKSE VEKLRGKEGK KVESASGDTN FQALKTYGRD LVEQAGKLDP VIGRDEEIRR VVRILSRRTK
201: NNPVLIGEPG VGKTAVVEGL AQRIVKGDVP NSLTDVRLIS LDMGALVAGA KYRGEFEERL KSVLKEVEDA EGKVILFIDE IHLVLGAGKT EGSMDAANLF
301: KPMLARGQLR CIGATTLEEY RKYVEKDAAF ERRFQQVYVA EPSVPDTISI LRGLKEKYEG HHGVRIQDRA LINAAQLSAR YITGRHLPDK AIDLVDEACA
401: NVRVQLDSQP EEIDNLERKR MQLEIELHAL EREKDKASKA RLIEVRKELD DLRDKLQPLT MKYRKEKERI DEIRRLKQKR EELMFSLQEA ERRYDLARAA
501: DLRYGAIQEV ESAIAQLEGT SSEENVMLTE NVGPEHIAEV VSRWTGIPVT RLGQNEKERL IGLADRLHKR VVGQNQAVNA VSEAILRSRA GLGRPQQPTG
601: SFLFLGPTGV GKTELAKALA EQLFDDENLL VRIDMSEYME QHSVSRLIGA PPGYVGHEEG GQLTEAVRRR PYCVILFDEV EKAHVAVFNT LLQVLDDGRL
701: TDGQGRTVDF RNSVIIMTSN LGAEHLLAGL TGKVTMEVAR DCVMREVRKH FRPELLNRLD EIVVFDPLSH DQLRKVARLQ MKDVAVRLAE RGVALAVTDA
801: ALDYILAESY DPVYGARPIR RWMEKKVVTE LSKMVVREEI DENSTVYIDA GAGDLVYRVE SGGLVDASTG KKSDVLIHIA NGPKRSDAAQ AVKKMRIEEI
901: EDDDNEEMIE D
101: KSRGDTHLAV DQLIMGLLED SQIRDLLNEV GVATARVKSE VEKLRGKEGK KVESASGDTN FQALKTYGRD LVEQAGKLDP VIGRDEEIRR VVRILSRRTK
201: NNPVLIGEPG VGKTAVVEGL AQRIVKGDVP NSLTDVRLIS LDMGALVAGA KYRGEFEERL KSVLKEVEDA EGKVILFIDE IHLVLGAGKT EGSMDAANLF
301: KPMLARGQLR CIGATTLEEY RKYVEKDAAF ERRFQQVYVA EPSVPDTISI LRGLKEKYEG HHGVRIQDRA LINAAQLSAR YITGRHLPDK AIDLVDEACA
401: NVRVQLDSQP EEIDNLERKR MQLEIELHAL EREKDKASKA RLIEVRKELD DLRDKLQPLT MKYRKEKERI DEIRRLKQKR EELMFSLQEA ERRYDLARAA
501: DLRYGAIQEV ESAIAQLEGT SSEENVMLTE NVGPEHIAEV VSRWTGIPVT RLGQNEKERL IGLADRLHKR VVGQNQAVNA VSEAILRSRA GLGRPQQPTG
601: SFLFLGPTGV GKTELAKALA EQLFDDENLL VRIDMSEYME QHSVSRLIGA PPGYVGHEEG GQLTEAVRRR PYCVILFDEV EKAHVAVFNT LLQVLDDGRL
701: TDGQGRTVDF RNSVIIMTSN LGAEHLLAGL TGKVTMEVAR DCVMREVRKH FRPELLNRLD EIVVFDPLSH DQLRKVARLQ MKDVAVRLAE RGVALAVTDA
801: ALDYILAESY DPVYGARPIR RWMEKKVVTE LSKMVVREEI DENSTVYIDA GAGDLVYRVE SGGLVDASTG KKSDVLIHIA NGPKRSDAAQ AVKKMRIEEI
901: EDDDNEEMIE D
Arabidopsis Description
CLPB1Chaperone protein ClpB1 [Source:UniProtKB/Swiss-Prot;Acc:P42730]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.