Factsheet for HORVU6Hr1G063810.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G102460.1	Barley	cytosol	34.75	63.64
HORVU7Hr1G008950.1	Barley	cytosol, plastid	46.1	54.62
HORVU4Hr1G008860.1	Barley	cytosol, peroxisome	41.13	52.97
HORVU7Hr1G008380.2	Barley	cytosol	46.1	44.52
TraesCS6B01G278000.1	Wheat	cytosol	81.56	28.01
HORVU5Hr1G123460.3	Barley	mitochondrion	45.39	26.83
HORVU7Hr1G105430.1	Barley	cytosol	50.0	25.13
HORVU7Hr1G105530.1	Barley	cytosol	50.35	21.61
OQU85081	Sorghum	mitochondrion, plastid	54.26	21.31
HORVU1Hr1G068970.1	Barley	cytosol	52.48	20.53
HORVU7Hr1G008940.2	Barley	cytosol	46.1	20.47
HORVU5Hr1G102440.2	Barley	mitochondrion, plastid	48.23	20.36
HORVU7Hr1G105270.3	Barley	cytosol	49.29	19.47
OQU81585	Sorghum	cytosol	43.62	19.04
HORVU5Hr1G081860.1	Barley	cytosol	37.59	13.87
HORVU3Hr1G071120.7	Barley	cytosol	44.33	13.68
HORVU1Hr1G076190.4	Barley	nucleus	43.62	13.43
HORVU2Hr1G072020.5	Barley	plastid	37.59	12.71
HORVU2Hr1G071080.3	Barley	plastid	39.01	12.0
HORVU6Hr1G028690.1	Barley	mitochondrion	40.78	11.69
HORVU4Hr1G014120.2	Barley	plastid	38.65	11.62
HORVU4Hr1G090440.2	Barley	plastid	42.2	11.25
HORVU5Hr1G031470.6	Barley	endoplasmic reticulum, golgi, mitochondrion, plastid	38.65	11.2
HORVU7Hr1G035110.4	Barley	cytosol	6.38	4.09
HORVU1Hr1G076100.1	Barley	cytosol	1.06	1.84
Os02t0537400-01	Rice	cytosol	1.77	1.14
HORVU7Hr1G009000.2	Barley	cytosol	1.06	0.85
KRH63249	Soybean	mitochondrion	0.35	0.52

Protein Annotations

EnsemblPlants:HORVU6Hr1G063810.3	EnsemblPlantsGene:HORVU6Hr1G063810	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:P-loop_NTPase	PANTHER:PTHR11638	PANTHER:PTHR11638:SF100
PFAM:PF00004	SEG:seg	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI000B46259D	UniProt:A0A287UF92
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:431899202..431902555

Molecular Weight (calculated)

29549.7 Da

IEP (calculated)

10.186

GRAVY (calculated)

-0.094

Length

282 amino acids

Sequence
(BLAST)

001: SAGVAPAYFA TLTAGTAIPA ASSTSPPPTG FAAAAASAHA PGHCTTGSLY KPPVVKTRTP LHTSARGRRG SLAGAAPHNA APKEMALLTY GRDMTAVAGM
101: TDPVIGRDDE IDRVVCILCR RTKNSAVLVG APGVGKTAIA EGLARRIAGG MVPAALAGAR VVEVDLGAMV AGAQYRGMFE QRLKNVIKEA EDADGKVVLF
201: IDEVHMLVGS GNWKCKGGSM DGANLLKPAL ARGRIRCVGA TTFDEYRTYI EKDAALERRF QKVHVEDRRS RAHKQPFVSC RG

Best Arabidopsis Sequence Match ( AT1G74310.1 )
(BLAST)

001: MNPEKFTHKT NETIATAHEL AVNAGHAQFT PLHLAGALIS DPTGIFPQAI SSAGGENAAQ SAERVINQAL KKLPSQSPPP DDIPASSSLI KVIRRAQAAQ
101: KSRGDTHLAV DQLIMGLLED SQIRDLLNEV GVATARVKSE VEKLRGKEGK KVESASGDTN FQALKTYGRD LVEQAGKLDP VIGRDEEIRR VVRILSRRTK
201: NNPVLIGEPG VGKTAVVEGL AQRIVKGDVP NSLTDVRLIS LDMGALVAGA KYRGEFEERL KSVLKEVEDA EGKVILFIDE IHLVLGAGKT EGSMDAANLF
301: KPMLARGQLR CIGATTLEEY RKYVEKDAAF ERRFQQVYVA EPSVPDTISI LRGLKEKYEG HHGVRIQDRA LINAAQLSAR YITGRHLPDK AIDLVDEACA
401: NVRVQLDSQP EEIDNLERKR MQLEIELHAL EREKDKASKA RLIEVRKELD DLRDKLQPLT MKYRKEKERI DEIRRLKQKR EELMFSLQEA ERRYDLARAA
501: DLRYGAIQEV ESAIAQLEGT SSEENVMLTE NVGPEHIAEV VSRWTGIPVT RLGQNEKERL IGLADRLHKR VVGQNQAVNA VSEAILRSRA GLGRPQQPTG
601: SFLFLGPTGV GKTELAKALA EQLFDDENLL VRIDMSEYME QHSVSRLIGA PPGYVGHEEG GQLTEAVRRR PYCVILFDEV EKAHVAVFNT LLQVLDDGRL
701: TDGQGRTVDF RNSVIIMTSN LGAEHLLAGL TGKVTMEVAR DCVMREVRKH FRPELLNRLD EIVVFDPLSH DQLRKVARLQ MKDVAVRLAE RGVALAVTDA
801: ALDYILAESY DPVYGARPIR RWMEKKVVTE LSKMVVREEI DENSTVYIDA GAGDLVYRVE SGGLVDASTG KKSDVLIHIA NGPKRSDAAQ AVKKMRIEEI
901: EDDDNEEMIE D

Arabidopsis Description

CLPB1Chaperone protein ClpB1 [Source:UniProtKB/Swiss-Prot;Acc:P42730]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.