Factsheet for HORVU5Hr1G123460.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G324200.1	Wheat	cytosol	16.56	73.15
TraesCS5B01G554000.1	Wheat	cytosol	84.28	69.91
HORVU5Hr1G102460.1	Barley	cytosol	21.59	66.88
TraesCS4A01G324100.1	Wheat	cytosol	88.05	65.83
KRH63249	Soybean	mitochondrion	23.27	57.22
HORVU7Hr1G105430.1	Barley	cytosol	65.83	55.97
HORVU7Hr1G008380.2	Barley	cytosol	33.75	55.14
HORVU7Hr1G008950.1	Barley	cytosol, plastid	27.25	54.62
HORVU4Hr1G008860.1	Barley	cytosol, peroxisome	24.32	52.97
HORVU7Hr1G105530.1	Barley	cytosol	72.12	52.36
HORVU5Hr1G102440.2	Barley	mitochondrion, plastid	72.33	51.65
HORVU7Hr1G105270.3	Barley	cytosol	72.12	48.18
HORVU1Hr1G068970.1	Barley	cytosol	72.75	48.13
HORVU7Hr1G008940.2	Barley	cytosol	63.73	47.87
OQU85081	Sorghum	mitochondrion, plastid	70.86	47.08
HORVU6Hr1G063810.3	Barley	plastid	26.83	45.39
HORVU7Hr1G035110.4	Barley	cytosol	41.72	45.23
OQU81585	Sorghum	cytosol	60.8	44.89
HORVU7Hr1G009000.2	Barley	cytosol	28.93	39.2
HORVU1Hr1G076190.4	Barley	nucleus	61.43	31.99
HORVU3Hr1G071120.7	Barley	cytosol	60.8	31.73
HORVU5Hr1G081860.1	Barley	cytosol	46.54	29.06
HORVU1Hr1G076100.1	Barley	cytosol	9.64	28.22
HORVU2Hr1G072020.5	Barley	plastid	47.38	27.1
HORVU2Hr1G071080.3	Barley	plastid	51.36	26.72
HORVU4Hr1G014120.2	Barley	plastid	49.48	25.16
HORVU5Hr1G031470.6	Barley	endoplasmic reticulum, golgi, mitochondrion, plastid	50.52	24.77
HORVU6Hr1G028690.1	Barley	mitochondrion	50.73	24.59
HORVU4Hr1G090440.2	Barley	plastid	52.83	23.82

Protein Annotations

EnsemblPlants:HORVU5Hr1G123460.3	EnsemblPlantsGene:HORVU5Hr1G123460	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:ClpA/B	InterPro:ClpA/B_CS1	InterPro:P-loop_NTPase
PANTHER:PTHR11638	PANTHER:PTHR11638:SF100	PFAM:PF00004	PFAM:PF07724	PRINTS:PR00300	ScanProsite:PS00870
SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI000B479DC6	UniProt:A0A287T0T0	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr5H:+:664208880..664210716

Molecular Weight (calculated)

52407.4 Da

IEP (calculated)

8.804

GRAVY (calculated)

-0.270

Length

477 amino acids

Sequence
(BLAST)

001: SYKRRQRRKA SLSRFGRDMT ATARKGDPVV GRDDEIDSVI RILCRRTKNC AALVGAPGVG KTAIAEGLAQ RVAAGTVPAP LLGARIVELD VAGMVSGTVW
101: RGMFEERMKN VIQQAEDSDG KVILFIDEMH MLIGAGDWQG RHDAANMLKP ALARGRIRCV GATTLDEYRK HVEKDPALER RFQKVHVDEP DEQATIGILG
201: GLKTRFEEHH GIKILDDAIV AAAQLAGRYV TGRQFPDKAI DLIDEACTTT KGGQAYVSPD HVAKRSRAGL DPPGQPIGSF LFLGSTGVGK TELAKALAQQ
301: LFDNEKMLLR FDMSEYVNSG SVTRLIGAPP SYLGYDDGGQ LTEKVRSRPY SVILFDEVEK ADPSVLNVFL QLLDDGVLTD GKGRKVDFKN TVIIMTSNLG
401: AEHLIAGIRG ENTMKDARDL LMKKVHEYFK PELLNRLSQI VVFDPLSHDQ LMEVVKIQMK NATTRVEKKG ISLSVSD

Best Arabidopsis Sequence Match ( AT1G74310.1 )
(BLAST)

001: MNPEKFTHKT NETIATAHEL AVNAGHAQFT PLHLAGALIS DPTGIFPQAI SSAGGENAAQ SAERVINQAL KKLPSQSPPP DDIPASSSLI KVIRRAQAAQ
101: KSRGDTHLAV DQLIMGLLED SQIRDLLNEV GVATARVKSE VEKLRGKEGK KVESASGDTN FQALKTYGRD LVEQAGKLDP VIGRDEEIRR VVRILSRRTK
201: NNPVLIGEPG VGKTAVVEGL AQRIVKGDVP NSLTDVRLIS LDMGALVAGA KYRGEFEERL KSVLKEVEDA EGKVILFIDE IHLVLGAGKT EGSMDAANLF
301: KPMLARGQLR CIGATTLEEY RKYVEKDAAF ERRFQQVYVA EPSVPDTISI LRGLKEKYEG HHGVRIQDRA LINAAQLSAR YITGRHLPDK AIDLVDEACA
401: NVRVQLDSQP EEIDNLERKR MQLEIELHAL EREKDKASKA RLIEVRKELD DLRDKLQPLT MKYRKEKERI DEIRRLKQKR EELMFSLQEA ERRYDLARAA
501: DLRYGAIQEV ESAIAQLEGT SSEENVMLTE NVGPEHIAEV VSRWTGIPVT RLGQNEKERL IGLADRLHKR VVGQNQAVNA VSEAILRSRA GLGRPQQPTG
601: SFLFLGPTGV GKTELAKALA EQLFDDENLL VRIDMSEYME QHSVSRLIGA PPGYVGHEEG GQLTEAVRRR PYCVILFDEV EKAHVAVFNT LLQVLDDGRL
701: TDGQGRTVDF RNSVIIMTSN LGAEHLLAGL TGKVTMEVAR DCVMREVRKH FRPELLNRLD EIVVFDPLSH DQLRKVARLQ MKDVAVRLAE RGVALAVTDA
801: ALDYILAESY DPVYGARPIR RWMEKKVVTE LSKMVVREEI DENSTVYIDA GAGDLVYRVE SGGLVDASTG KKSDVLIHIA NGPKRSDAAQ AVKKMRIEEI
901: EDDDNEEMIE D

Arabidopsis Description

CLPB1Chaperone protein ClpB1 [Source:UniProtKB/Swiss-Prot;Acc:P42730]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.