Factsheet for HORVU5Hr1G081860.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
MultiLoc:	cytosol
Predotar:	secretory
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G321300.1	Wheat	plastid	98.56	81.32
Os02t0526400-01	Rice	cytosol, plasma membrane	87.43	81.27
TraesCS5D01G328100.1	Wheat	plastid	98.82	81.18
TraesCS5B01G321800.1	Wheat	plastid	98.43	81.12
HORVU2Hr1G072020.5	Barley	plastid	78.14	71.58
Zm00001d016664_P001	Maize	plastid	86.52	69.8
EES05165	Sorghum	plastid	86.91	69.38
GSMUA_Achr6P23780_001	Banana	cytosol	69.9	63.2
CDY38846	Canola	plastid	64.79	53.17
GSMUA_Achr10P...	Banana	plastid	68.59	52.88
CDY32646	Canola	plastid	64.53	52.78
Bra029193.1-P	Field mustard	plastid	65.05	52.7
AT5G51070.1	Thale cress	plastid	64.92	52.49
CDX71686	Canola	plastid	64.01	52.47
VIT_19s0014g00020.t01	Wine grape	plastid	64.79	52.33
KRH63903	Soybean	plastid	62.57	50.53
Solyc03g117950.2.1	Tomato	nucleus	62.96	49.9
KRH54048	Soybean	plastid	62.04	49.89
PGSC0003DMT400036893	Potato	plastid	62.83	49.74
HORVU5Hr1G123460.3	Barley	mitochondrion	29.06	46.54
HORVU5Hr1G102460.1	Barley	cytosol	9.03	44.81
HORVU7Hr1G008380.2	Barley	cytosol	15.84	41.44
HORVU7Hr1G105430.1	Barley	cytosol	29.97	40.82
HORVU7Hr1G105530.1	Barley	cytosol	34.55	40.18
HORVU7Hr1G008940.2	Barley	cytosol	33.25	40.0
HORVU7Hr1G008950.1	Barley	cytosol, plastid	12.43	39.92
HORVU2Hr1G071080.3	Barley	plastid	47.77	39.8
HORVU5Hr1G102440.2	Barley	mitochondrion, plastid	34.69	39.67
HORVU1Hr1G068970.1	Barley	cytosol	36.26	38.42
HORVU7Hr1G035110.4	Barley	cytosol	22.12	38.41
HORVU4Hr1G008860.1	Barley	cytosol, peroxisome	10.99	38.36
HORVU7Hr1G009000.2	Barley	cytosol	17.54	38.07
HORVU4Hr1G014120.2	Barley	plastid	46.34	37.74
HORVU6Hr1G063810.3	Barley	plastid	13.87	37.59
HORVU7Hr1G105270.3	Barley	cytosol	35.08	37.53
HORVU5Hr1G031470.6	Barley	endoplasmic reticulum, golgi, mitochondrion, plastid	47.64	37.41
HORVU1Hr1G076190.4	Barley	nucleus	40.84	34.06
HORVU3Hr1G071120.7	Barley	cytosol	40.58	33.92
HORVU6Hr1G028690.1	Barley	mitochondrion	43.06	33.44
HORVU4Hr1G090440.2	Barley	plastid	43.59	31.47
HORVU1Hr1G076100.1	Barley	cytosol	6.02	28.22

Protein Annotations

Gene3D:1.10.1780.10	Gene3D:1.10.8.60	MapMan:19.4.2.9.5	Gene3D:3.40.50.300	UniProt:A0A287S0L5	InterPro:AAA+_ATPase
InterPro:ATPase_AAA_core	InterPro:ClpA/B	InterPro:ClpA/B_CS1	InterPro:ClpA/B_CS2	InterPro:Clp_ATPase_C	InterPro:Clp_N
InterPro:Clp_N_dom_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009628	GO:GO:0009987	GO:GO:0019538	GO:GO:0034605
GO:GO:1901002	GO:GO:1902584	EnsemblPlantsGene:HORVU5Hr1G081860	EnsemblPlants:HORVU5Hr1G081860.1	InterPro:IPR036628	InterPro:P-loop_NTPase
PFAM:PF00004	PFAM:PF02861	PFAM:PF07724	PFAM:PF10431	PRINTS:PR00300	ScanProsite:PS00870
ScanProsite:PS00871	PANTHER:PTHR43572	PANTHER:PTHR43572:SF17	SMART:SM00382	SMART:SM01086	SUPFAM:SSF52540
UniParc:UPI000B464ADD	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:565886213..565891313

Molecular Weight (calculated)

83740.6 Da

IEP (calculated)

5.463

GRAVY (calculated)

-0.235

Length

764 amino acids

Sequence
(BLAST)

001: MGCSFISPEH LAIALFTLDD PTTNNLLRSL GADPSQLASV AVTRLHEELA KDGRDTAGAS SLKVPEKAPA GAGAGRSAFS KSLSKKKDKG ALDQFCLDLT
101: TQASGGFIDP IIGREEEIER VVQIICRRTK NNPILLGEAG VGKTAIAEGL ALRIANGDVP IFLVAKRIMS LDIGLLIAGA KERGELESRI TSLIREVREA
201: GDVILFIDEV HNLVGSGTAG KGKGAGLDIS NLLKPPLARG ELQCIAATTL DEHRMHFEKD KALNRRFQPV FVDEPSQEDA VKILLGLREN YETYHKCKFT
301: LEAINAAVYL SARYIPDRQL PDKAIDLIDE AGSRARIESY QKKKEGQSSV LLKEPDEYWQ EIKAVQAMHD VVLSNKMKYS PNENNQQNAS LNAEGPRQDK
401: AESTTEEPIV VGTEEIARVA SLWSGIPVQQ LTADDKKILV GLDDELRKRV IGQDDAVAAI SRAVKRSRVG LSDPDRPIAT MLFCGPTGVG KTELTKALAA
501: SYFGSESAML RLDMSEYMER HTVSKLIGSP PGYIGYGETG TLTEAVRRKP FTVVLLDEIE KAHPDIFNIL LQIFEDGHLA DSQGRRVSFK NTLIVMTSNV
601: GSTSISNGRR SMGFSTDDTE SSRYVAVKSL VMEELKGFFR PELLNRIDET VVFRPLEQTQ MLAILDILLE ELKGKLLAVG IGLEVSDAMK ELICREGYDK
701: NYGARPLRRA ITQLMEDVIS EAILFGEYKP GDTILVDTDN KGKPCLSRLN QPPIVQVSDS TRTF

Best Arabidopsis Sequence Match ( AT3G48870.2 )
(BLAST)

001: MKMSSLKAPV LRIQATEYRE PRGRVKMMSS LQAPLLTIQS FSGLRAPSAL DYLGRPSPGF LVKYKLAKSS GREKASRCVP KAMFERFTEK AIKVIMLSQE
101: EARRLGHNFV GTEQILLGLI GEGTGIAAKV LKSMGINLKD SRVEVEKIIG RGSGFVAVEI PFTPRAKRVL ELSLEEARQL GHNYIGSEHL LLGLLREGEG
201: VAARVLENLG ADPSNIRTQV IRMVGENNEV TASVGGGSSG NSKMPTLEEY GTNLTKLAEE GKLDPVVGRQ PQIERVVQIL ARRTKNNPCL IGEPGVGKTA
301: IAEGLAQRIA SGDVPETIEG KTVITLDMGL LVAGTKYRGE FEERLKKLME EIRQSDEIIL FIDEVHTLIG AGAAEGAIDA ANILKPALAR GELQCIGATT
401: IDEYRKHIEK DPALERRFQP VKVPEPTVEE AIQILQGLRE RYEIHHKLRY TDEALVAAAQ LSHQYISDRF LPDKAIDLID EAGSRVRLRH AQLPEEAREL
501: EKQLRQITKE KNEAVRSQDF EMAGSHRDRE IELKAEIANV LSRGKEVAKA ENEAEEGGPT VTESDIQHIV ATWTGIPVEK VSSDESSRLL QMEQTLHTRV
601: IGQDEAVKAI SRAIRRARVG LKNPNRPIAS FIFSGPTGVG KSELAKALAA YYFGSEEAMI RLDMSEFMER HTVSKLIGSP PGYVGYTEGG QLTEAVRRRP
701: YTLVLFDEIE KAHPDVFNMM LQILEDGRLT DSKGRTVDFK NTLLIMTSNV GSSVIEKGGR RIGFDLDHDE KDSSYNRIKS LVTEELKQYF RPEFLNRLDE
801: MIVFRQLTKL EVKEIADIML KEVVARLEVK EIELQVTERF KERVVDEGFD PSYGARPLRR AIMRLLEDSM AEKMLSRDIK EGDSVIVDVD AEGSVVVLSG
901: TTGRVGGFAA EEAMEDPIPI L

Arabidopsis Description

CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.