Factsheet for GSMUA_Achr10P12430_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P23780_001	Banana	cytosol	64.68	75.86
OQU81478	Sorghum	cytosol	58.93	68.63
HORVU5Hr1G081860.1	Barley	cytosol	52.88	68.59
HORVU2Hr1G072020.5	Barley	plastid	57.52	68.35
Os02t0526400-01	Rice	cytosol, plasma membrane	56.41	68.0
Zm00001d003847_P001	Maize	plastid	60.75	64.59
TraesCS2B01G307500.1	Wheat	plastid	59.74	62.71
TraesCS2A01G291100.1	Wheat	plastid	59.64	62.47
TraesCS2D01G289100.1	Wheat	plastid	59.64	62.47
Zm00001d016664_P001	Maize	plastid	58.12	60.82
EES05165	Sorghum	plastid	58.32	60.4
TraesCS5D01G328100.1	Wheat	plastid	56.21	59.89
VIT_19s0014g00020.t01	Wine grape	plastid	56.91	59.62
TraesCS5A01G321300.1	Wheat	plastid	55.7	59.61
TraesCS5B01G321800.1	Wheat	plastid	55.7	59.55
CDY38846	Canola	plastid	55.4	58.97
CDY32646	Canola	plastid	55.3	58.67
CDX71686	Canola	plastid	55.1	58.58
Bra029193.1-P	Field mustard	plastid	55.5	58.32
AT5G51070.1	Thale cress	plastid	55.6	58.31
PGSC0003DMT400036893	Potato	plastid	56.41	57.93
Solyc03g117950.2.1	Tomato	nucleus	56.31	57.88
KRH63903	Soybean	plastid	52.07	54.55
KRH54048	Soybean	plastid	52.07	54.32
GSMUA_Achr6P08040_001	Banana	cytosol	33.2	51.09
GSMUA_Achr6P16470_001	Banana	plastid	36.63	41.44
GSMUA_Achr3P18630_001	Banana	plastid	37.64	41.31
GSMUA_Achr8P09160_001	Banana	plastid	37.03	39.72
GSMUA_Achr9P22420_001	Banana	cytosol	32.29	36.24
GSMUA_Achr3P16240_001	Banana	cytosol	29.97	34.86
GSMUA_Achr6P16670_001	Banana	plastid	32.9	34.79
GSMUA_Achr1P13710_001	Banana	cytosol	29.47	34.31
GSMUA_AchrUn_...	Banana	plastid	33.1	28.01
GSMUA_Achr6P08050_001	Banana	cytosol	2.83	22.05
GSMUA_Achr2P12140_001	Banana	plastid	3.83	16.59

Protein Annotations

Gene3D:1.10.1780.10	Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	Gene3D:4.10.860.10	InterPro:AAA+_ATPase
InterPro:ATPase_AAA_core	InterPro:ClpA/B	InterPro:ClpA/B_CS1	InterPro:ClpA/B_CS2	InterPro:Clp_ATPase_C	InterPro:Clp_N
InterPro:Clp_N_dom_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0008150
GO:GO:0008152	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr10G12430_001	EnsemblPlants:GSMUA_Achr10P12430_001	EnsemblPlants:GSMUA_Achr10T12430_001	InterPro:IPR036628
UniProt:M0RHL9	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF02861	PFAM:PF07724	PFAM:PF10431
PRINTS:PR00300	ScanProsite:PS00870	ScanProsite:PS00871	PANTHER:PTHR43572	PANTHER:PTHR43572:SF20	SMART:SM00382
SMART:SM01086	SUPFAM:SSF52540	UniParc:UPI000296E0D0	SEG:seg	:	:

Description

Putative Chaperone protein ClpB 1 [Source:GMGC_GENE;Acc:GSMUA_Achr10G12430_001]

Coordinates

chr10:+:21450283..21457084

Molecular Weight (calculated)

108618.0 Da

IEP (calculated)

9.295

GRAVY (calculated)

-0.156

Length

991 amino acids

Sequence
(BLAST)

001: MEAACASSSA ASLLTLHMLR PSSAHRHPFA VAVAATHLYP SPTVAGFKAS SSASSLIDLR LCRRQSRRCS SGSRSAPSRP SSSPSGRRGH SVRRWSSTST
101: SSSASSPRTA ALVGSSDPES PSTAPGKPSK RVFEAAVECS RNMGSNFIGP EHIAIGLFNA DDGSAAQVLR RSSLANSTSQ SKEWILSCVP PYLSSLNQVI
201: LAMFIPCQAI NQVYCLRKVF LGADPSRLAL VALSRLQGEL AKDGREPLAS SGKIQKKSPA GKPKSLLTQF CVDLTARASE GLIDPVIGRD TEIQRIIQIL
301: CRRRKNNPIL LGDAGVGKTA IAEGLALRIV KREITSFLAA KRILSLDVGL LMAGAKERGE LEARVTGLIR EVRKSGDIIL FIDEVHTLIG SGIVGRGNKG
401: SGLDIANLLK PSLGRGELQC IASTTLDEHK THFENDKALA RRFQPVFINE PSQEDAVKIL LGLREKYETY HKCRFTLEAI NAAVYLSARY IPDRHLPDKA
501: IDLIDEAGSR ARMDAFKRKK EEQISVLSKS PEEYWQEIRA VQAMHEMVTL LISSSFSFGF SWFRQLQCFQ KILEKKVKQI NAMVSRVSEY IEMVLTNKLN
601: YSTDLRVTDE SKIMGDVKDA SESSISSSLN YDEQITVGPE EIATVASLWS GIPVKRLNAD ERKLLVGLDE ELKRRVIGQD DAVSAISRAV KRSRVGLSDP
701: GRPIAALLFC GPTGVGKTEL TKALAASYFG SEEAILRLDM SEYMERHSVS KLIGSPPGYI GYGDGGTLTE AVRRRPFTVI LLDEIEKAHP VIFNILLQVF
801: EDGHLTDSQG RRVSFKNTLV VMTSNVGSEA ISKGKRSIGF LISKDEQSNS FAAMKALVME ELKAYFQPEL LNRIDEVIVF RSLERTQMME ILDIMLKQVK
901: SRLLSLGFGL QVSDAIKDLV CQQGFDRSYG ARPLRRAVTR LVEDVISEAI LTGDYKPEDT LMLDVDASGN PVVNRIPDQT IHLSDVSSPF Q

Best Arabidopsis Sequence Match ( AT5G51070.1 )
(BLAST)

001: MEVLSTSSPL TLHSHRLLSA SSSSSHVTSI AASSLSSFAS SYLGISLSNR TIHRFSTTPT NLRRFPQRKR KKFTPISAVF ERFTERAIRA IIFSQKEAKS
101: LGKDMVYTQH LLLGLIAEDR DPQGFLGSGI TIDKAREAVW SIWDEANSDS KQEEASSTSY SKSTDMPFSI STKRVFEAAV EYSRTMDCQY IAPEHIAVGL
201: FTVDDGSAGR VLKRLGANMN LLTAAALTRL KGEIAKDGRE PSSSSKGSFE SPPSGRIAGS GPGGKKAKNV LEQFCVDLTA RASEGLIDPV IGREKEVQRV
301: IQILCRRTKN NPILLGEAGV GKTAIAEGLA ISIAEASAPG FLLTKRIMSL DIGLLMAGAK ERGELEARVT ALISEVKKSG KVILFIDEVH TLIGSGTVGR
401: GNKGSGLDIA NLLKPSLGRG ELQCIASTTL DEFRSQFEKD KALARRFQPV LINEPSEEDA VKILLGLREK YEAHHNCKYT MEAIDAAVYL SSRYIADRFL
501: PDKAIDLIDE AGSRARIEAF RKKKEDAICI LSKPPNDYWQ EIKTVQAMHE VVLSSRQKQD DGDAISDESG ELVEESSLPP AAGDDEPILV GPDDIAAVAS
601: VWSGIPVQQI TADERMLLMS LEDQLRGRVV GQDEAVAAIS RAVKRSRVGL KDPDRPIAAM LFCGPTGVGK TELTKALAAN YFGSEESMLR LDMSEYMERH
701: TVSKLIGSPP GYVGFEEGGM LTEAIRRRPF TVVLFDEIEK AHPDIFNILL QLFEDGHLTD SQGRRVSFKN ALIIMTSNVG SLAIAKGRHG SIGFILDDDE
801: EAASYTGMKA LVVEELKNYF RPELLNRIDE IVIFRQLEKA QMMEILNLML QDLKSRLVAL GVGLEVSEPV KELICKQGYD PAYGARPLRR TVTEIVEDPL
901: SEAFLAGSFK PGDTAFVVLD DTGNPSVRTK PDSSTIRVTD KTSIA

Arabidopsis Description

CLPDChaperone protein ClpD, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P42762]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.