Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 10
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P08040_001 | Banana | cytosol | 17.03 | 6.06 |
| GSMUA_Achr6P23780_001 | Banana | cytosol | 17.47 | 4.73 |
| GSMUA_Achr6P16470_001 | Banana | plastid | 17.9 | 4.68 |
| GSMUA_Achr9P22420_001 | Banana | cytosol | 17.9 | 4.64 |
| GSMUA_Achr3P16240_001 | Banana | cytosol | 17.03 | 4.58 |
| GSMUA_Achr6P16670_001 | Banana | plastid | 18.34 | 4.48 |
| GSMUA_Achr1P13710_001 | Banana | cytosol | 16.59 | 4.47 |
| GSMUA_Achr3P18630_001 | Banana | plastid | 17.47 | 4.43 |
| GSMUA_Achr8P09160_001 | Banana | plastid | 17.47 | 4.33 |
| GSMUA_Achr10P... | Banana | plastid | 16.59 | 3.83 |
| GSMUA_AchrUn_... | Banana | plastid | 17.9 | 3.5 |
| GSMUA_Achr6P08050_001 | Banana | cytosol | 0.0 | 0.0 |
| Zm00001d039497_P002 | Maize | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P12140_001 | EnsemblPlants:GSMUA_Achr2T12140_001 | EnsemblPlantsGene:GSMUA_Achr2G12140_001 | Gene3D:1.10.1780.10 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0019538 | InterPro:Clp_N | InterPro:Clp_N_dom_sf | InterPro:IPR036628 | PANTHER:PTHR43572 | PANTHER:PTHR43572:SF19 |
| PFAM:PF02861 | SUPFAM:SSF81923 | UniParc:UPI000295A9C4 | UniProt:M0S7A5 | MapMan:35.1 | : |
Description
ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr2G12140_001]
Coordinates
chr2:-:14669322..14671404
Molecular Weight (calculated)
25226.8 Da
IEP (calculated)
9.891
GRAVY (calculated)
-0.140
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MASASVQPTT LPVVGACRSQ WQLQRSGKAR RPCNKMCHLQ PYFPSLRGFM GLQITDNLKF LSRSVCGLHC VVSGYVYNQL GKARQGVTAA MLDLFTEKAI
101: KVIILAQEEA RRLGHKYVGT EQILDALIGE GTDVTVNDLK SVRNNPKDAH VQKVIRGGRK FVADMPFSPQ AKHVLELSLK EARQLGHNYI GLEHLLIGLL
201: RGVEGIATYV LENYGVDPSN INTQASLKS
101: KVIILAQEEA RRLGHKYVGT EQILDALIGE GTDVTVNDLK SVRNNPKDAH VQKVIRGGRK FVADMPFSPQ AKHVLELSLK EARQLGHNYI GLEHLLIGLL
201: RGVEGIATYV LENYGVDPSN INTQASLKS
001: MAMATRVLAQ STPPSLACYQ RNVPSRGSGR SRRSVKMMCS QLQVSGLRMQ GFMGLRGNNA LDTLGKSRQD FHSKVRQAMN VPKGKASRFT VKAMFERFTE
101: KAIKVIMLAQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DARVEVEKII GRGSGFVAVE IPFTPRAKRV LELSLEEARQ LGHNYIGSEH
201: LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTANVGGGSS SNKMPTLEEY GTNLTKLAEE GKLDPVVGRQ PQIERVVQIL GRRTKNNPCL
301: IGEPGVGKTA IAEGLAQRIA SGDVPETIEG KKVITLDMGL LVAGTKYRGE FEERLKKLME EIRQSDEIIL FIDEVHTLIG AGAAEGAIDA ANILKPALAR
401: GELQCIGATT LDEYRKHIEK DPALERRFQP VKVPEPTVDE TIQILKGLRE RYEIHHKLRY TDESLVAAAQ LSYQYISDRF LPDKAIDLID EAGSRVRLRH
501: AQVPEEAREL EKELRQITKE KNEAVRGQDF EKAGTLRDRE IELRAEVSAI QAKGKEMSKA ESETGEEGPM VTESDIQHIV SSWTGIPVEK VSTDESDRLL
601: KMEETLHKRI IGQDEAVKAI SRAIRRARVG LKNPNRPIAS FIFSGPTGVG KSELAKALAA YYFGSEEAMI RLDMSEFMER HTVSKLIGSP PGYVGYTEGG
701: QLTEAVRRRP YTVVLFDEIE KAHPDVFNMM LQILEDGRLT DSKGRTVDFK NTLLIMTSNV GSSVIEKGGR RIGFDLDYDE KDSSYNRIKS LVTEELKQYF
801: RPEFLNRLDE MIVFRQLTKL EVKEIADILL KEVFERLKKK EIELQVTERF KERVVDEGYN PSYGARPLRR AIMRLLEDSM AEKMLAREIK EGDSVIVDVD
901: AEGNVTVLNG GSGTPTTSLE EQEDSLPVA
101: KAIKVIMLAQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DARVEVEKII GRGSGFVAVE IPFTPRAKRV LELSLEEARQ LGHNYIGSEH
201: LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTANVGGGSS SNKMPTLEEY GTNLTKLAEE GKLDPVVGRQ PQIERVVQIL GRRTKNNPCL
301: IGEPGVGKTA IAEGLAQRIA SGDVPETIEG KKVITLDMGL LVAGTKYRGE FEERLKKLME EIRQSDEIIL FIDEVHTLIG AGAAEGAIDA ANILKPALAR
401: GELQCIGATT LDEYRKHIEK DPALERRFQP VKVPEPTVDE TIQILKGLRE RYEIHHKLRY TDESLVAAAQ LSYQYISDRF LPDKAIDLID EAGSRVRLRH
501: AQVPEEAREL EKELRQITKE KNEAVRGQDF EKAGTLRDRE IELRAEVSAI QAKGKEMSKA ESETGEEGPM VTESDIQHIV SSWTGIPVEK VSTDESDRLL
601: KMEETLHKRI IGQDEAVKAI SRAIRRARVG LKNPNRPIAS FIFSGPTGVG KSELAKALAA YYFGSEEAMI RLDMSEFMER HTVSKLIGSP PGYVGYTEGG
701: QLTEAVRRRP YTVVLFDEIE KAHPDVFNMM LQILEDGRLT DSKGRTVDFK NTLLIMTSNV GSSVIEKGGR RIGFDLDYDE KDSSYNRIKS LVTEELKQYF
801: RPEFLNRLDE MIVFRQLTKL EVKEIADILL KEVFERLKKK EIELQVTERF KERVVDEGYN PSYGARPLRR AIMRLLEDSM AEKMLAREIK EGDSVIVDVD
901: AEGNVTVLNG GSGTPTTSLE EQEDSLPVA
Arabidopsis Description
CLPC1Chaperone protein ClpC1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FI56]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.