Factsheet for GSMUA_Achr3P16240_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P13710_001	Banana	cytosol	92.49	92.6
Zm00001d038806_P001	Maize	nucleus	85.92	80.26
EES19828	Sorghum	nucleus	85.92	80.18
Os05t0519700-01	Rice	nucleus	85.56	79.93
TraesCS1B01G352400.1	Wheat	cytosol, golgi	85.8	79.72
TraesCS1D01G342100.1	Wheat	golgi	85.68	79.52
TraesCS3A01G274400.1	Wheat	cytosol	84.98	79.3
TraesCS1A01G340100.1	Wheat	nucleus	85.21	79.08
TraesCS3B01G308100.1	Wheat	cytosol	84.74	79.08
TraesCS3D01G273600.1	Wheat	cytosol	84.74	79.08
VIT_17s0000g07190.t01	Wine grape	nucleus	83.92	78.49
CDX85823	Canola	nucleus	80.75	77.92
Bra015922.1-P	Field mustard	nucleus	82.39	77.06
KRH56831	Soybean	endoplasmic reticulum	82.28	76.95
CDX96531	Canola	cytosol	66.9	76.72
EES01468	Sorghum	nucleus	82.28	76.61
CDX73074	Canola	cytosol	66.78	76.58
CDX68190	Canola	nucleus	73.12	76.44
KRH54672	Soybean	endoplasmic reticulum	67.37	76.23
Bra003807.1-P	Field mustard	nucleus	78.64	75.96
Solyc03g115230.2.1	Tomato	plastid	80.05	74.86
PGSC0003DMT400063352	Potato	nucleus	79.81	74.56
Solyc06g082560.1.1	Tomato	plastid	73.47	73.3
TraesCS4B01G393100.1	Wheat	cytosol	69.84	65.89
AT4G14670.1	Thale cress	cytosol	45.77	62.6
GSMUA_Achr6P08040_001	Banana	cytosol	34.98	46.27
GSMUA_Achr9P22420_001	Banana	cytosol	45.54	43.94
AT4G14675.1	Thale cress	cytosol	7.98	42.77
GSMUA_Achr6P16670_001	Banana	plastid	45.77	41.62
HORVU7Hr1G008950.1	Barley	cytosol, plastid	10.92	39.08
GSMUA_Achr3P18630_001	Banana	plastid	38.5	36.32
GSMUA_Achr6P16470_001	Banana	plastid	36.97	35.96
GSMUA_Achr8P09160_001	Banana	plastid	38.26	35.28
GSMUA_Achr6P23780_001	Banana	cytosol	34.86	35.15
GSMUA_Achr10P...	Banana	plastid	34.86	29.97
GSMUA_AchrUn_...	Banana	plastid	34.62	25.19
GSMUA_Achr2P12140_001	Banana	plastid	4.58	17.03
GSMUA_Achr6P08050_001	Banana	cytosol	2.23	14.96

Protein Annotations

Gene3D:1.10.1780.10	Gene3D:1.10.8.60	MapMan:26.4.2.3	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core
InterPro:ClpA/B	InterPro:ClpA/B_CS1	InterPro:ClpA/B_CS2	InterPro:Clp_ATPase_C	InterPro:Clp_N	InterPro:Clp_N_dom_sf
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0008150
GO:GO:0008152	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr3G16240_001	EnsemblPlants:GSMUA_Achr3P16240_001	EnsemblPlants:GSMUA_Achr3T16240_001	InterPro:IPR036628
UniProt:M0SF40	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF02861	PFAM:PF07724	PFAM:PF10431
PRINTS:PR00300	ScanProsite:PS00870	ScanProsite:PS00871	PANTHER:PTHR11638	PANTHER:PTHR11638:SF146	SMART:SM00382
SMART:SM01086	SUPFAM:SSF52540	SUPFAM:SSF81923	UniParc:UPI000296F4DF	SEG:seg	:

Description

Heat shock protein 101 [Source:GMGC_GENE;Acc:GSMUA_Achr3G16240_001]

Coordinates

chr3:-:17448955..17452947

Molecular Weight (calculated)

94291.4 Da

IEP (calculated)

5.897

GRAVY (calculated)

-0.298

Length

852 amino acids

Sequence
(BLAST)

001: MNPDKFTHKT NEALVAAHEL ALDSGHAQIT PLHLASALAA DPNGLLRQAL VNASGGAGDA AAQSFDRTVI RRAQSSQKSR GDSHLAVDQL ILGLLEDPQI
101: AECLKEAGVS AARVRAEIEK LRGKEGKKVE SASGDTNFQA LKTYGRDLVE VAGKLDPGLA QRIVRGDVPS NLLDVRLVAL DMGALIAGAK YRGEFEERLK
201: AVLKEVEEAD GKVILFIDEI HLVLGAGRTE GSMDAANLLK PMLARGQLRC IGATTLEEYR KYVEKDAAFE RRFQQVYVAE PSIADTISIL RGLKEKYEGH
301: HGVRIQDRAL VVAAQLSSRY ITGRHLPDKA IDLVDEACAN VRVQLDSQPE EIDNLERKRI QLEVELHALE KEKDKASKAR LIEVRKELDD LRDKLQPLMM
401: KYRKEKEGID EIRRLKQRRE ELMFTLKEAE RRMDLARVAD LKYGALQEID ASIATLEGGT NENLMLTETV GPEHIAEVVS RWTGIPVTRL GQNEKDRLIG
501: LAERLHKRVV GQNQAVDAVA DAVLRSRAGL GRPLQPTGSF LFLGPTGVGK TELAKALAEQ LFDDENLLIR IDMSEYMEQH SVARLIGAPP GYVGHEEGGQ
601: LTEAVRRRPY SVILFDEVEK AHVAVFNTLL QVLDDGRLTD GQGRTVDFTN TVIIMTSNLG AEHLLAGMAG ESSMKIAREQ VLLEVRRHFR PEMLNRLDEI
701: VVFDPLSHDQ LRKVARLQMK DVALRLAQRG IALAVTDAAL DIVLSESYDP VYGARPIRRW LEKKVVTHLS RMLIQGEIDE NTTVYIDAAL GRNELSYRVE
801: RNGGLVDAAT GRKSDILIEI ANGAAKTDAA QAVKKLKVLC NETDNDVDEE LE

Best Arabidopsis Sequence Match ( AT1G74310.1 )
(BLAST)

001: MNPEKFTHKT NETIATAHEL AVNAGHAQFT PLHLAGALIS DPTGIFPQAI SSAGGENAAQ SAERVINQAL KKLPSQSPPP DDIPASSSLI KVIRRAQAAQ
101: KSRGDTHLAV DQLIMGLLED SQIRDLLNEV GVATARVKSE VEKLRGKEGK KVESASGDTN FQALKTYGRD LVEQAGKLDP VIGRDEEIRR VVRILSRRTK
201: NNPVLIGEPG VGKTAVVEGL AQRIVKGDVP NSLTDVRLIS LDMGALVAGA KYRGEFEERL KSVLKEVEDA EGKVILFIDE IHLVLGAGKT EGSMDAANLF
301: KPMLARGQLR CIGATTLEEY RKYVEKDAAF ERRFQQVYVA EPSVPDTISI LRGLKEKYEG HHGVRIQDRA LINAAQLSAR YITGRHLPDK AIDLVDEACA
401: NVRVQLDSQP EEIDNLERKR MQLEIELHAL EREKDKASKA RLIEVRKELD DLRDKLQPLT MKYRKEKERI DEIRRLKQKR EELMFSLQEA ERRYDLARAA
501: DLRYGAIQEV ESAIAQLEGT SSEENVMLTE NVGPEHIAEV VSRWTGIPVT RLGQNEKERL IGLADRLHKR VVGQNQAVNA VSEAILRSRA GLGRPQQPTG
601: SFLFLGPTGV GKTELAKALA EQLFDDENLL VRIDMSEYME QHSVSRLIGA PPGYVGHEEG GQLTEAVRRR PYCVILFDEV EKAHVAVFNT LLQVLDDGRL
701: TDGQGRTVDF RNSVIIMTSN LGAEHLLAGL TGKVTMEVAR DCVMREVRKH FRPELLNRLD EIVVFDPLSH DQLRKVARLQ MKDVAVRLAE RGVALAVTDA
801: ALDYILAESY DPVYGARPIR RWMEKKVVTE LSKMVVREEI DENSTVYIDA GAGDLVYRVE SGGLVDASTG KKSDVLIHIA NGPKRSDAAQ AVKKMRIEEI
901: EDDDNEEMIE D

Arabidopsis Description

CLPB1Chaperone protein ClpB1 [Source:UniProtKB/Swiss-Prot;Acc:P42730]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.