Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G74310.1 | Thale cress | nucleus | 52.2 | 9.11 |
| VIT_17s0000g07190.t01 | Wine grape | nucleus | 51.57 | 9.0 |
| GSMUA_Achr1P13710_001 | Banana | cytosol | 47.17 | 8.81 |
| Solyc03g115230.2.1 | Tomato | plastid | 47.8 | 8.34 |
| Os05t0519700-01 | Rice | nucleus | 46.54 | 8.11 |
| TraesCS3A01G274400.1 | Wheat | cytosol | 46.54 | 8.11 |
| EES19828 | Sorghum | nucleus | 46.54 | 8.11 |
| TraesCS1B01G352400.1 | Wheat | cytosol, golgi | 46.54 | 8.07 |
| TraesCS1D01G342100.1 | Wheat | golgi | 46.54 | 8.06 |
| Zm00001d038806_P001 | Maize | nucleus | 45.91 | 8.0 |
| PGSC0003DMT400063352 | Potato | nucleus | 45.91 | 8.0 |
| TraesCS3B01G308100.1 | Wheat | cytosol | 45.91 | 8.0 |
| TraesCS3D01G273600.1 | Wheat | cytosol | 45.91 | 8.0 |
| GSMUA_Achr3P16240_001 | Banana | cytosol | 42.77 | 7.98 |
| EES01468 | Sorghum | nucleus | 45.91 | 7.98 |
| TraesCS1A01G340100.1 | Wheat | nucleus | 45.91 | 7.95 |
| Solyc06g082560.1.1 | Tomato | plastid | 37.11 | 6.91 |
| TraesCS4B01G393100.1 | Wheat | cytosol | 38.99 | 6.87 |
| AT2G25140.1 | Thale cress | mitochondrion | 23.9 | 3.94 |
| AT5G15450.1 | Thale cress | plastid | 21.38 | 3.51 |
| AT5G50920.1 | Thale cress | plastid | 20.13 | 3.44 |
| AT5G51070.1 | Thale cress | plastid | 20.13 | 3.39 |
| AT3G48870.3 | Thale cress | cytosol, plastid | 20.13 | 3.36 |
| AT3G45450.1 | Thale cress | cytosol | 3.77 | 1.76 |
| AT4G14670.1 | Thale cress | cytosol | 0.0 | 0.0 |
Protein Annotations
| ArrayExpress:AT4G14675 | EnsemblPlants:AT4G14675.1 | EnsemblPlantsGene:AT4G14675 | EntrezGene:28720129 | Gene3D:1.10.8.60 | Gene3D:3.40.50.300 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | InterPro:ATPase_AAA_core | InterPro:P-loop_NTPase |
| PANTHER:PTHR11638 | PANTHER:PTHR11638:SF100 | PFAM:PF07724 | ProteinID:ANM66955.1 | RefSeq:NP_001328818.1 | SUPFAM:SSF52540 |
| UniParc:UPI00084879CF | UniProt:A0A1P8B5U7 | MapMan:35.1 | : | : | : |
Description
Chaperone ClpB1-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B5U7]
Coordinates
chr4:+:8412733..8413278
Molecular Weight (calculated)
18263.3 Da
IEP (calculated)
7.237
GRAVY (calculated)
-0.282
Length
159 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSNLGADHL VSGLTGEMTM QVARDNAMKD AKKHFRPELL NRLDEIVMFH PLSHEHLAKI VQLQVKNVRP IRRWLERKVV TDISMMIVRE EIGDDSIVCI
101: DVNEAKTDLV YRIDKNVFVK IEQTLDVVIH SGNKRGRSND EDHIVTLTKK IKNEVVVID
101: DVNEAKTDLV YRIDKNVFVK IEQTLDVVIH SGNKRGRSND EDHIVTLTKK IKNEVVVID
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.