Skip to main content
crop-pal logo
Thale cress
Search for another protein from :
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX71686 Canola plastid 91.01 92.27
CDY38846 Canola plastid 90.79 92.16
CDY32646 Canola plastid 90.79 91.86
Bra029193.1-P Field mustard plastid 91.64 91.83
VIT_19s0014g00020.t01 Wine grape plastid 68.89 68.82
GSMUA_Achr6P23780_001 Banana cytosol 60.42 67.57
Solyc03g117950.2.1 Tomato nucleus 68.36 67.01
PGSC0003DMT400036893 Potato plastid 68.25 66.84
OQU81478 Sorghum cytosol 58.94 65.45
HORVU5Hr1G081860.1 Barley cytosol 52.49 64.92
HORVU2Hr1G072020.5 Barley plastid 56.08 63.55
Os02t0526400-01 Rice cytosol, plasma membrane 55.24 63.5
KRH63903 Soybean plastid 62.86 62.79
KRH54048 Soybean plastid 62.96 62.63
Zm00001d003847_P001 Maize plastid 61.38 62.23
TraesCS5B01G321800.1 Wheat plastid 59.26 60.41
TraesCS2B01G307500.1 Wheat plastid 60.32 60.38
TraesCS2A01G291100.1 Wheat plastid 60.32 60.25
TraesCS5D01G328100.1 Wheat plastid 59.26 60.22
TraesCS5A01G321300.1 Wheat plastid 58.94 60.15
TraesCS2D01G289100.1 Wheat plastid 60.21 60.15
Zm00001d016664_P001 Maize plastid 59.37 59.24
EES05165 Sorghum plastid 59.79 59.04
GSMUA_Achr10P... Banana plastid 58.31 55.6
AT5G50920.1 Thale cress plastid 42.86 43.6
AT3G48870.3 Thale cress cytosol, plastid 42.96 42.65
AT2G25140.1 Thale cress mitochondrion 36.61 35.89
AT5G15450.1 Thale cress plastid 36.72 35.85
AT1G74310.1 Thale cress nucleus 34.18 35.46
AT4G14670.1 Thale cress cytosol 22.86 34.67
AT3G45450.1 Thale cress cytosol 12.17 33.72
AT4G14675.1 Thale cress cytosol 3.39 20.13
Protein Annotations
Gene3D:1.10.1780.10Gene3D:1.10.8.60MapMan:19.4.2.9.5Gene3D:3.40.50.300EntrezGene:835180UniProt:A0A178UDT2
InterPro:AAA+_ATPaseProteinID:AED96029.1ArrayExpress:AT5G51070EnsemblPlantsGene:AT5G51070RefSeq:AT5G51070TAIR:AT5G51070
RefSeq:AT5G51070-TAIR-GEnsemblPlants:AT5G51070.1TAIR:AT5G51070.1InterPro:ATPase_AAA_coreEMBL:AY035112EMBL:AY133868
Unigene:At.25346ProteinID:BAB10330.1InterPro:ClpA/BInterPro:ClpA/B_CS1InterPro:ClpA/B_CS2InterPro:Clp_ATPase_C
InterPro:Clp_NInterPro:Clp_N_dom_sfEMBL:D17582Symbol:ERD1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0006950GO:GO:0008150GO:GO:0008152GO:GO:0009507
GO:GO:0009536GO:GO:0009570GO:GO:0009628GO:GO:0009941GO:GO:0009987GO:GO:0016043
GO:GO:0016787GO:GO:0016887GO:GO:0019538GO:GO:0034214GO:GO:0034605GO:GO:0042803
GO:GO:1901002GO:GO:1902584InterPro:IPR036628RefSeq:NP_568750.1ProteinID:OAO91865.1InterPro:P-loop_NTPase
UniProt:P42762PFAM:PF00004PFAM:PF02861PFAM:PF07724PFAM:PF10431PO:PO:0000013
PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103
PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005
PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030
PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281PRINTS:PR00300
ScanProsite:PS00870ScanProsite:PS00871PANTHER:PTHR43572PANTHER:PTHR43572:SF20SMART:SM00382SMART:SM01086
SUPFAM:SSF52540SUPFAM:SSF81923UniParc:UPI0000001762SEG:seg::
Description
CLPDChaperone protein ClpD, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P42762]
Coordinates
chr5:+:20764096..20768764
Molecular Weight (calculated)
103241.0 Da
IEP (calculated)
6.107
GRAVY (calculated)
-0.191
Length
945 amino acids
Sequence
(BLAST)
001: MEVLSTSSPL TLHSHRLLSA SSSSSHVTSI AASSLSSFAS SYLGISLSNR TIHRFSTTPT NLRRFPQRKR KKFTPISAVF ERFTERAIRA IIFSQKEAKS
101: LGKDMVYTQH LLLGLIAEDR DPQGFLGSGI TIDKAREAVW SIWDEANSDS KQEEASSTSY SKSTDMPFSI STKRVFEAAV EYSRTMDCQY IAPEHIAVGL
201: FTVDDGSAGR VLKRLGANMN LLTAAALTRL KGEIAKDGRE PSSSSKGSFE SPPSGRIAGS GPGGKKAKNV LEQFCVDLTA RASEGLIDPV IGREKEVQRV
301: IQILCRRTKN NPILLGEAGV GKTAIAEGLA ISIAEASAPG FLLTKRIMSL DIGLLMAGAK ERGELEARVT ALISEVKKSG KVILFIDEVH TLIGSGTVGR
401: GNKGSGLDIA NLLKPSLGRG ELQCIASTTL DEFRSQFEKD KALARRFQPV LINEPSEEDA VKILLGLREK YEAHHNCKYT MEAIDAAVYL SSRYIADRFL
501: PDKAIDLIDE AGSRARIEAF RKKKEDAICI LSKPPNDYWQ EIKTVQAMHE VVLSSRQKQD DGDAISDESG ELVEESSLPP AAGDDEPILV GPDDIAAVAS
601: VWSGIPVQQI TADERMLLMS LEDQLRGRVV GQDEAVAAIS RAVKRSRVGL KDPDRPIAAM LFCGPTGVGK TELTKALAAN YFGSEESMLR LDMSEYMERH
701: TVSKLIGSPP GYVGFEEGGM LTEAIRRRPF TVVLFDEIEK AHPDIFNILL QLFEDGHLTD SQGRRVSFKN ALIIMTSNVG SLAIAKGRHG SIGFILDDDE
801: EAASYTGMKA LVVEELKNYF RPELLNRIDE IVIFRQLEKA QMMEILNLML QDLKSRLVAL GVGLEVSEPV KELICKQGYD PAYGARPLRR TVTEIVEDPL
901: SEAFLAGSFK PGDTAFVVLD DTGNPSVRTK PDSSTIRVTD KTSIA
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.